Guide to the Human Genome
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Name: FANCI Sequence: fasta or formatted (1268aa) NCBI GI: 82830440
Description:

Fanconi anemia, complementation group I isoform 2

Referenced in:

DNases, Recombination, and DNA Repair

Other entries for this name:
alt prot [1328aa] Fanconi anemia, complementation group I isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.3         67           2
 C cysteine            2.1         26           2
 D aspartate           4.3         55           2
 E glutamate           7.6         97           8
 F phenylalanine       4.0         51           2
 G glycine             4.3         54           2
 H histidine           2.0         25           2
 I isoleucine          5.3         67           2
 K lysine              7.8         99           3
 L leucine            15.1        191           4
 M methionine          2.4         30           1
 N asparagine          3.6         46           3
 P proline             3.0         38           2
 Q glutamine           5.9         75           2
 R arginine            3.5         44           3
 S serine              9.6        122           3
 T threonine           4.6         58           2
 V valine              7.0         89           2
 W tryptophan          0.5          6           1
 Y tyrosine            2.2         28           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Fanconi anemia, complementation group I isoform 2 [H... 
FANCI                 0.921   Fanconi anemia, complementation group I isoform 1 [...
AKAP9                 0.006   A-kinase anchor protein 9 isoform 2 
AKAP9                 0.006   A-kinase anchor protein 9 isoform 3 
HMMR                  0.006   hyaluronan-mediated motility receptor isoform d [Ho...
HMMR                  0.006   hyaluronan-mediated motility receptor isoform a [Ho...
HMMR                  0.006   hyaluronan-mediated motility receptor isoform c [Ho...
HMMR                  0.006   hyaluronan-mediated motility receptor isoform b [Ho...
FANCD2                0.006   Fanconi anemia complementation group D2 isoform b [H...
FANCD2                0.006   Fanconi anemia complementation group D2 isoform a [H...
CENPF                 0.004   centromere protein F 
TRIM26                0.003   tripartite motif-containing 26 
VPRBP                 0.003   HIV-1 Vpr binding protein 
PANX1                 0.003   pannexin 1 
CLCN2                 0.003   chloride channel 2 
WRB                   0.003   tryptophan rich basic protein isoform 2 
WRB                   0.003   tryptophan rich basic protein isoform 1 
EIF2AK4               0.003   eukaryotic translation initiation factor 2 alpha kin...
RPGRIP1L              0.003   RPGRIP1-like isoform b 
RPGRIP1L              0.003   RPGRIP1-like isoform a 
RSPH4A                0.003   radial spoke head 4 homolog A isoform 1 
SUPT6H                0.003   suppressor of Ty 6 homolog 
MMACHC                0.002   methylmalonic aciduria (cobalamin deficiency) cblC ...
FKSG2                 0.002   apoptosis inhibitor 
DAXX                  0.002   death-domain associated protein isoform a 
DAXX                  0.002   death-domain associated protein isoform a 
DAXX                  0.002   death-domain associated protein isoform b 
RYR1                  0.002   skeletal muscle ryanodine receptor isoform 2 
RYR1                  0.002   skeletal muscle ryanodine receptor isoform 1 
C5orf41               0.002   luman-recruiting factor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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