Guide to the Human Genome
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Name: CEP164 Sequence: fasta or formatted (1460aa) NCBI GI: 115648142
Description:

centrosomal protein 164kDa

Referenced in:

Centrosome

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.7        112           2
 C cysteine            0.6          9           1
 D aspartate           4.5         66           2
 E glutamate          13.6        199           5
 F phenylalanine       1.2         18           1
 G glycine             4.7         69           2
 H histidine           2.9         43           1
 I isoleucine          2.3         33           2
 K lysine              7.1        104           7
 L leucine            12.2        178           2
 M methionine          1.2         18           1
 N asparagine          1.5         22           2
 P proline             5.9         86           3
 Q glutamine           8.1        118           2
 R arginine            6.5         95           3
 S serine             10.8        158           3
 T threonine           3.3         48           2
 V valine              3.6         53           2
 W tryptophan          1.0         14           2
 Y tyrosine            1.2         17           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   centrosomal protein 164kDa 
TCHH                  0.044   trichohyalin 
PLEC1                 0.039   plectin 1 isoform 11 
PLEC1                 0.039   plectin 1 isoform 10 
PLEC1                 0.039   plectin 1 isoform 8 
PLEC1                 0.039   plectin 1 isoform 7 
PLEC1                 0.039   plectin 1 isoform 6 
PLEC1                 0.039   plectin 1 isoform 3 
PLEC1                 0.039   plectin 1 isoform 2 
PLEC1                 0.039   plectin 1 isoform 1 
MYH7B                 0.037   myosin, heavy polypeptide 7B, cardiac muscle, beta ...
CEP250                0.037   centrosomal protein 2 
MYH11                 0.036   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
MYH11                 0.036   smooth muscle myosin heavy chain 11 isoform SM1B [Ho...
MYH11                 0.036   smooth muscle myosin heavy chain 11 isoform SM2B [Ho...
MYH11                 0.036   smooth muscle myosin heavy chain 11 isoform SM2A [Ho...
GOLGA4                0.035   golgi autoantigen, golgin subfamily a, 4 
MYH10                 0.035   myosin, heavy polypeptide 10, non-muscle 
LOC727832             0.034   golgi autoantigen, golgin subfamily a-like 
MYH8                  0.034   myosin, heavy chain 8, skeletal muscle, perinatal [...
MYH7                  0.034   myosin, heavy chain 7, cardiac muscle, beta 
NUMA1                 0.034   nuclear mitotic apparatus protein 1 
MYH9                  0.034   myosin, heavy polypeptide 9, non-muscle 
CCDC88B               0.033   coiled-coil domain containing 88 
MYO18A                0.033   myosin 18A isoform b 
MYO18A                0.033   myosin 18A isoform a 
CGN                   0.033   cingulin 
MYH13                 0.033   myosin, heavy polypeptide 13, skeletal muscle [Homo...
MYH14                 0.032   myosin, heavy chain 14 isoform 1 
MYH14                 0.032   myosin, heavy chain 14 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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