Guide to the Human Genome
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Name: ZCCHC24 Sequence: fasta or formatted (241aa) NCBI GI: 223633947
Description:

zinc finger, CCHC domain containing 24

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.1         17           2
 C cysteine            4.6         11           1
 D aspartate           3.7          9           1
 E glutamate           5.0         12           1
 F phenylalanine       3.3          8           2
 G glycine             7.1         17           1
 H histidine           3.7          9           1
 I isoleucine          2.1          5           1
 K lysine              7.9         19           2
 L leucine            10.0         24           2
 M methionine          1.2          3           1
 N asparagine          4.1         10           2
 P proline             8.3         20           3
 Q glutamine           5.8         14           1
 R arginine            4.6         11           2
 S serine              9.5         23           2
 T threonine           2.9          7           1
 V valine              2.9          7           1
 W tryptophan          1.2          3           1
 Y tyrosine            5.0         12           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger, CCHC domain containing 24 
RBBP6                 0.033   retinoblastoma-binding protein 6 isoform 2 
RBBP6                 0.033   retinoblastoma-binding protein 6 isoform 1 
ZAR1L                 0.027   zygote arrest 1-like 
ZAR1                  0.024   zygote arrest 1 
UNC13A                0.020   unc-13 homolog A 
ZNF507                0.016   zinc finger protein 507 
ZNF507                0.016   zinc finger protein 507 
ZNF283                0.016   zinc finger protein 283 
SFRS7                 0.016   splicing factor, arginine/serine-rich 7 
XRN2                  0.014   5'-3' exoribonuclease 2 
ZCCHC6                0.012   zinc finger, CCHC domain containing 6 
ZCCHC7                0.012   zinc finger, CCHC domain containing 7 
ZCCHC13               0.012   zinc finger, CCHC domain containing 13 
ZCCHC11               0.010   zinc finger, CCHC domain containing 11 isoform a [Ho...
ZCCHC11               0.010   zinc finger, CCHC domain containing 11 isoform b [Ho...
ZCCHC11               0.010   zinc finger, CCHC domain containing 11 isoform c [Ho...
LIN28                 0.010   lin-28 homolog 
ZNF280C               0.010   zinc finger protein 280C 
ZNF189                0.010   zinc finger protein 189 isoform 2 
ZNF189                0.010   zinc finger protein 189 isoform 1 
LOC100287699          0.008   PREDICTED: hypothetical protein XP_002342252 
ZNF618                0.008   zinc finger protein 618 
RTP4                  0.008   28kD interferon responsive protein 
ZCCHC8                0.008   zinc finger, CCHC domain containing 8 
ZNF521                0.008   zinc finger protein 521 
ZNF790                0.008   zinc finger protein 790 
RCHY1                 0.006   ring finger and CHY zinc finger domain containing 1 ...
RCHY1                 0.006   ring finger and CHY zinc finger domain containing 1 ...
RCHY1                 0.006   ring finger and CHY zinc finger domain containing 1 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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