Guide to the Human Genome
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Name: ZNF790 Sequence: fasta or formatted (636aa) NCBI GI: 125346192
Description:

zinc finger protein 790

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.1         20           1
 C cysteine            6.0         38           1
 D aspartate           3.0         19           1
 E glutamate           9.4         60           2
 F phenylalanine       6.0         38           2
 G glycine             6.6         42           1
 H histidine           7.1         45           2
 I isoleucine          4.4         28           1
 K lysine              9.9         63           2
 L leucine             6.0         38           2
 M methionine          1.3          8           2
 N asparagine          3.6         23           1
 P proline             2.4         15           1
 Q glutamine           5.7         36           1
 R arginine            5.8         37           1
 S serine              7.2         46           4
 T threonine           6.0         38           1
 V valine              2.0         13           1
 W tryptophan          1.3          8           1
 Y tyrosine            3.3         21           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 790 
ZNF420                0.502   zinc finger protein 420 
ZNF283                0.465   zinc finger protein 283 
ZNF571                0.451   zinc finger protein 571 
ZNF780B               0.450   zinc finger protein 780B 
ZNF546                0.442   zinc finger protein 546 
ZNF540                0.439   zinc finger protein 540 
ZNF780A               0.436   zinc finger protein 780A isoform b 
ZNF780A               0.436   zinc finger protein 780A isoform b 
ZNF780A               0.433   zinc finger protein 780A isoform a 
ZNF429                0.430   zinc finger protein 429 
ZNF184                0.427   zinc finger protein 184 
ZNF726                0.425   PREDICTED: zinc finger protein 726 
ZNF726                0.425   PREDICTED: zinc finger protein 726 
ZNF726                0.425   PREDICTED: zinc finger protein 726 
ZFP14                 0.424   zinc finger protein 14-like 
ZNF470                0.421   zinc finger protein 470 
ZNF43                 0.416   zinc finger protein 43 
ZNF93                 0.416   zinc finger protein 93 
ZNF345                0.416   zinc finger protein 345 
ZNF30                 0.415   zinc finger protein 30 isoform b 
ZNF66                 0.413   PREDICTED: zinc finger protein 66 
ZNF66                 0.413   PREDICTED: zinc finger protein 66 
ZNF160                0.413   zinc finger protein 160 
ZNF160                0.413   zinc finger protein 160 
ZNF160                0.413   zinc finger protein 160 
ZFP30                 0.413   zinc finger protein 30 homolog 
ZNF30                 0.412   zinc finger protein 30 isoform a 
ZNF30                 0.412   zinc finger protein 30 isoform a 
ZNF66                 0.411   PREDICTED: zinc finger protein 66 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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