Guide to the Human Genome
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Name: ZNF283 Sequence: fasta or formatted (679aa) NCBI GI: 149588643
Description:

zinc finger protein 283

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.5         24           1
 C cysteine            6.3         43           1
 D aspartate           2.2         15           1
 E glutamate           9.9         67           2
 F phenylalanine       5.3         36           2
 G glycine             8.4         57           1
 H histidine           6.2         42           1
 I isoleucine          3.7         25           2
 K lysine             11.3         77           2
 L leucine             5.6         38           2
 M methionine          0.7          5           1
 N asparagine          2.4         16           2
 P proline             2.7         18           3
 Q glutamine           4.4         30           1
 R arginine            3.4         23           1
 S serine              9.1         62           2
 T threonine           5.7         39           2
 V valine              2.9         20           1
 W tryptophan          1.6         11           1
 Y tyrosine            4.6         31           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 283 
ZNF420                0.529   zinc finger protein 420 
ZNF780B               0.492   zinc finger protein 780B 
ZNF571                0.485   zinc finger protein 571 
ZNF780A               0.478   zinc finger protein 780A isoform b 
ZNF780A               0.478   zinc finger protein 780A isoform b 
ZNF780A               0.478   zinc finger protein 780A isoform a 
ZNF546                0.478   zinc finger protein 546 
ZNF540                0.463   zinc finger protein 540 
ZNF345                0.453   zinc finger protein 345 
ZNF30                 0.438   zinc finger protein 30 isoform a 
ZNF30                 0.438   zinc finger protein 30 isoform a 
ZNF30                 0.437   zinc finger protein 30 isoform b 
ZNF790                0.435   zinc finger protein 790 
ZNF470                0.433   zinc finger protein 470 
ZNF184                0.431   zinc finger protein 184 
ZNF665                0.430   zinc finger protein 665 
ZNF709                0.428   zinc finger protein 709 isoform a 
ZNF726                0.424   PREDICTED: zinc finger protein 726 
ZNF726                0.424   PREDICTED: zinc finger protein 726 
ZNF726                0.424   PREDICTED: zinc finger protein 726 
ZNF471                0.418   zinc finger protein 471 
ZNF208                0.418   zinc finger protein 208 
ZNF429                0.415   zinc finger protein 429 
ZNF607                0.413   zinc finger protein 607 
ZNF99                 0.413   zinc finger protein 99 
ZNF404                0.411   zinc finger protein 404 
ZNF93                 0.408   zinc finger protein 93 
ZNF91                 0.408   zinc finger protein 91 
ZNF331                0.407   zinc finger protein 331 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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