Guide to the Human Genome
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Name: UNC13A Sequence: fasta or formatted (1791aa) NCBI GI: 122937247
Description:

unc-13 homolog A

Referenced in:

Synapses

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.6        119           2
 C cysteine            2.2         39           2
 D aspartate           6.5        116           3
 E glutamate           8.5        153           6
 F phenylalanine       3.6         64           2
 G glycine             5.3         95           4
 H histidine           2.2         40           1
 I isoleucine          4.2         75           3
 K lysine              7.0        126           2
 L leucine             8.6        154           2
 M methionine          2.3         41           1
 N asparagine          3.8         68           2
 P proline             5.5         99           3
 Q glutamine           5.0         89           2
 R arginine            4.9         87           3
 S serine              7.7        138           2
 T threonine           5.1         91           2
 V valine              6.6        119           2
 W tryptophan          1.6         28           1
 Y tyrosine            2.8         50           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   unc-13 homolog A 
UNC13B                0.674   UNC13 (C. elegans)-like 
UNC13C                0.503   unc-13 homolog C 
UNC13D                0.020   unc-13 homolog D 
BAIAP3                0.019   BAI1-associated protein 3 
PRKCG                 0.016   protein kinase C, gamma 
PRKCB                 0.015   protein kinase C, beta isoform 1 
PRKCB                 0.015   protein kinase C, beta isoform 2 
PRKCA                 0.015   protein kinase C, alpha 
RASGRP1               0.014   RAS guanyl releasing protein 1 isoform b 
RASGRP1               0.014   RAS guanyl releasing protein 1 isoform a 
RASGRP3               0.013   RAS guanyl releasing protein 3 (calcium and DAG-reg...
RASGRP3               0.013   RAS guanyl releasing protein 3 (calcium and DAG-regu...
RASGRP3               0.013   RAS guanyl releasing protein 3 (calcium and DAG-regul...
MCTP1                 0.012   multiple C2 domains, transmembrane 1 isoform S [Homo...
MCTP1                 0.012   multiple C2 domains, transmembrane 1 isoform L [Hom...
RASGRP4               0.012   RAS guanyl releasing protein 4 isoform a 
RASGRP4               0.012   RAS guanyl releasing protein 4 isoform g 
RASGRP4               0.012   RAS guanyl releasing protein 4 isoform f 
RASGRP4               0.012   RAS guanyl releasing protein 4 isoform e 
RASGRP4               0.012   RAS guanyl releasing protein 4 isoform d 
RASGRP4               0.012   RAS guanyl releasing protein 4 isoform c 
RASGRP4               0.012   RAS guanyl releasing protein 4 isoform b 
CADPS2                0.011   Ca2+-dependent activator protein for secretion 2 is...
MCTP2                 0.011   multiple C2 domains, transmembrane 2 isoform 2 [Hom...
MCTP2                 0.011   multiple C2 domains, transmembrane 2 isoform 1 [Hom...
MCTP2                 0.011   multiple C2 domains, transmembrane 2 isoform 3 [Hom...
RASGRP2               0.011   RAS guanyl releasing protein 2 
RASGRP2               0.011   RAS guanyl releasing protein 2 
RASGRP2               0.011   RAS guanyl releasing protein 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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