Guide to the Human Genome
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Name: ZAR1 Sequence: fasta or formatted (424aa) NCBI GI: 28269687
Description:

zygote arrest 1

Referenced in:

Ovary, Uterus and Placenta

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.1         47           2
 C cysteine            4.5         19           1
 D aspartate           4.2         18           3
 E glutamate           5.9         25           2
 F phenylalanine       2.8         12           1
 G glycine            11.3         48           3
 H histidine           0.7          3           1
 I isoleucine          1.2          5           2
 K lysine              3.8         16           2
 L leucine             5.9         25           2
 M methionine          0.7          3           1
 N asparagine          0.9          4           1
 P proline            10.1         43           3
 Q glutamine           6.1         26           2
 R arginine           10.8         46           2
 S serine              7.8         33           2
 T threonine           3.1         13           2
 V valine              4.2         18           1
 W tryptophan          1.2          5           1
 Y tyrosine            3.5         15           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zygote arrest 1 
ZAR1L                 0.226   zygote arrest 1-like 
COL3A1                0.030   collagen type III alpha 1 preproprotein 
COL1A1                0.029   alpha 1 type I collagen preproprotein 
LOC100292370          0.029   PREDICTED: hypothetical protein 
PRB1                  0.029   proline-rich protein BstNI subfamily 1 isoform 1 pre...
PRB2                  0.025   proline-rich protein BstNI subfamily 2 
IRX5                  0.025   iroquois homeobox protein 5 
PRB3                  0.025   proline-rich protein BstNI subfamily 3 precursor [H...
SYN1                  0.024   synapsin I isoform Ia 
SYN1                  0.024   synapsin I isoform Ib 
OGFR                  0.024   opioid growth factor receptor 
PRB1                  0.024   proline-rich protein BstNI subfamily 1 isoform 2 pre...
LOC729570             0.023   PREDICTED: hypothetical protein 
LOC729570             0.023   PREDICTED: hypothetical protein 
LOC729570             0.023   PREDICTED: hypothetical protein 
COL11A1               0.022   alpha 1 type XI collagen isoform B preproprotein [Ho...
COL11A1               0.022   alpha 1 type XI collagen isoform C preproprotein [Ho...
COL11A1               0.022   alpha 1 type XI collagen isoform A preproprotein [Ho...
COL1A2                0.022   alpha 2 type I collagen 
RP1L1                 0.022   retinitis pigmentosa 1-like 1 
LOC100288606          0.022   PREDICTED: hypothetical protein XP_002342652 
LOC100290372          0.022   PREDICTED: hypothetical protein XP_002346788 
COL5A1                0.021   alpha 1 type V collagen preproprotein 
APC2                  0.021   adenomatosis polyposis coli 2 
LOC100127891          0.021   PREDICTED: similar to hCG2042508 
LOC100289383          0.021   PREDICTED: hypothetical protein XP_002344164 
LOC100127891          0.021   PREDICTED: similar to hCG2042508 
LOC100127891          0.021   PREDICTED: similar to hCG2042508 
PCLO                  0.021   piccolo isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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