Guide to the Human Genome
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Name: SLC26A9 Sequence: fasta or formatted (459aa) NCBI GI: 217272870
Description:

solute carrier family 26, member 9 isoform c

Referenced in:

Solute Carrier Families

Other entries for this name:
alt prot [791aa] solute carrier family 26, member 9 isoform a
alt prot [887aa] solute carrier family 26, member 9 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.1         37           1
 C cysteine            1.7          8           2
 D aspartate           5.0         23           1
 E glutamate           3.5         16           2
 F phenylalanine       5.7         26           2
 G glycine             6.1         28           2
 H histidine           2.0          9           1
 I isoleucine          5.4         25           2
 K lysine              5.4         25           2
 L leucine             9.8         45           2
 M methionine          3.1         14           1
 N asparagine          4.1         19           3
 P proline             5.0         23           2
 Q glutamine           5.0         23           2
 R arginine            2.6         12           2
 S serine              9.2         42           3
 T threonine           5.0         23           1
 V valine              8.7         40           3
 W tryptophan          0.7          3           1
 Y tyrosine            3.9         18           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 26, member 9 isoform c 
SLC26A9               1.000   solute carrier family 26, member 9 isoform a 
SLC26A9               1.000   solute carrier family 26, member 9 isoform b 
SLC26A6               0.263   solute carrier family 26, member 6 isoform 4 
SLC26A6               0.263   solute carrier family 26, member 6 isoform 1 
SLC26A6               0.262   solute carrier family 26, member 6 isoform 2 
SLC26A5               0.260   prestin isoform a 
SLC26A6               0.253   solute carrier family 26, member 6 isoform 3 
SLC26A5               0.233   prestin isoform b 
SLC26A4               0.215   pendrin 
SLC26A3               0.204   solute carrier family 26, member 3 
SLC26A2               0.162   solute carrier family 26 member 2 
SLC26A8               0.159   solute carrier family 26, member 8 isoform a 
SLC26A8               0.159   solute carrier family 26, member 8 isoform b 
SLC26A5               0.143   prestin isoform c 
SLC26A1               0.115   solute carrier family 26, member 1 isoform a 
SLC26A1               0.115   solute carrier family 26, member 1 isoform a 
SLC26A7               0.098   solute carrier family 26, member 7 isoform a 
SLC26A7               0.098   solute carrier family 26, member 7 isoform b 
SLC26A10              0.062   solute carrier family 26, member 10 
SLC26A11              0.043   solute carrier family 26, member 11 
CREBBP                0.011   CREB binding protein isoform b 
CREBBP                0.011   CREB binding protein isoform a 
MAST3                 0.010   microtubule associated serine/threonine kinase 3 [H...
OR5AS1                0.010   olfactory receptor, family 5, subfamily AS, member 1...
MIA3                  0.009   melanoma inhibitory activity family, member 3 [Homo...
POU6F2                0.009   POU domain, class 6, transcription factor 2 
TIMD4                 0.009   T-cell immunoglobulin and mucin domain containing 4...
SYCP3                 0.009   synaptonemal complex protein 3 
GABRA4                0.009   gamma-aminobutyric acid A receptor, alpha 4 precurso...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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