Guide to the Human Genome
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Name: SLC26A6 Sequence: fasta or formatted (740aa) NCBI GI: 94721257
Description:

solute carrier family 26, member 6 isoform 3

Referenced in:

Kidney
Solute Carrier Families

Other entries for this name:
alt prot [759aa] solute carrier family 26, member 6 isoform 1
alt prot [758aa] solute carrier family 26, member 6 isoform 2
alt prot [738aa] solute carrier family 26, member 6 isoform 4
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.8         65           3
 C cysteine            1.1          8           1
 D aspartate           4.3         32           1
 E glutamate           3.5         26           2
 F phenylalanine       4.6         34           2
 G glycine             6.9         51           2
 H histidine           2.6         19           1
 I isoleucine          4.3         32           3
 K lysine              4.3         32           3
 L leucine            14.7        109           3
 M methionine          2.0         15           1
 N asparagine          2.0         15           1
 P proline             4.7         35           2
 Q glutamine           5.1         38           3
 R arginine            4.3         32           3
 S serine              8.1         60           2
 T threonine           4.3         32           2
 V valine             10.5         78           3
 W tryptophan          1.1          8           1
 Y tyrosine            2.6         19           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 26, member 6 isoform 3 
SLC26A6               0.975   solute carrier family 26, member 6 isoform 1 
SLC26A6               0.975   solute carrier family 26, member 6 isoform 2 
SLC26A6               0.948   solute carrier family 26, member 6 isoform 4 
SLC26A5               0.380   prestin isoform a 
SLC26A4               0.368   pendrin 
SLC26A5               0.367   prestin isoform b 
SLC26A9               0.332   solute carrier family 26, member 9 isoform a 
SLC26A9               0.332   solute carrier family 26, member 9 isoform b 
SLC26A3               0.331   solute carrier family 26, member 3 
SLC26A5               0.300   prestin isoform c 
SLC26A2               0.278   solute carrier family 26 member 2 
SLC26A1               0.272   solute carrier family 26, member 1 isoform a 
SLC26A1               0.272   solute carrier family 26, member 1 isoform a 
SLC26A8               0.229   solute carrier family 26, member 8 isoform a 
SLC26A7               0.202   solute carrier family 26, member 7 isoform a 
SLC26A7               0.202   solute carrier family 26, member 7 isoform b 
SLC26A10              0.179   solute carrier family 26, member 10 
SLC26A9               0.159   solute carrier family 26, member 9 isoform c 
SLC26A5               0.157   prestin isoform d 
SLC26A11              0.142   solute carrier family 26, member 11 
SLC26A8               0.131   solute carrier family 26, member 8 isoform b 
SLC26A1               0.064   solute carrier family 26, member 1 isoform b 
BLM                   0.006   Bloom syndrome protein 
NBEA                  0.006   neurobeachin 
AP3D1                 0.005   adaptor-related protein complex 3, delta 1 subunit ...
ATP8A1                0.005   ATPase, aminophospholipid transporter (APLT), class...
ATP8A1                0.005   ATPase, aminophospholipid transporter (APLT), class ...
PLCB4                 0.004   phospholipase C beta 4 isoform a 
NALCN                 0.004   voltage gated channel like 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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