Guide to the Human Genome
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Name: SLC26A7 Sequence: fasta or formatted (663aa) NCBI GI: 20336282
Description:

solute carrier family 26, member 7 isoform b

Referenced in:

Kidney
Solute Carrier Families

Other entries for this name:
alt prot [656aa] solute carrier family 26, member 7 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.1         54           3
 C cysteine            2.7         18           1
 D aspartate           3.2         21           2
 E glutamate           3.8         25           2
 F phenylalanine       5.3         35           3
 G glycine             5.7         38           2
 H histidine           1.8         12           2
 I isoleucine          7.7         51           2
 K lysine              5.4         36           3
 L leucine            11.0         73           3
 M methionine          3.9         26           1
 N asparagine          4.7         31           2
 P proline             4.1         27           2
 Q glutamine           3.6         24           2
 R arginine            2.1         14           3
 S serine              7.8         52           2
 T threonine           5.1         34           2
 V valine              9.2         61           2
 W tryptophan          1.1          7           1
 Y tyrosine            3.6         24           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 26, member 7 isoform b 
SLC26A7               0.973   solute carrier family 26, member 7 isoform a 
SLC26A2               0.244   solute carrier family 26 member 2 
SLC26A3               0.234   solute carrier family 26, member 3 
SLC26A4               0.231   pendrin 
SLC26A6               0.222   solute carrier family 26, member 6 isoform 3 
SLC26A6               0.219   solute carrier family 26, member 6 isoform 4 
SLC26A6               0.219   solute carrier family 26, member 6 isoform 2 
SLC26A6               0.219   solute carrier family 26, member 6 isoform 1 
SLC26A5               0.213   prestin isoform b 
SLC26A5               0.213   prestin isoform a 
SLC26A10              0.211   solute carrier family 26, member 10 
SLC26A5               0.208   prestin isoform c 
SLC26A9               0.196   solute carrier family 26, member 9 isoform a 
SLC26A9               0.196   solute carrier family 26, member 9 isoform b 
SLC26A1               0.184   solute carrier family 26, member 1 isoform a 
SLC26A1               0.184   solute carrier family 26, member 1 isoform a 
SLC26A8               0.132   solute carrier family 26, member 8 isoform a 
SLC26A5               0.118   prestin isoform d 
SLC26A11              0.102   solute carrier family 26, member 11 
SLC26A9               0.067   solute carrier family 26, member 9 isoform c 
SLC26A8               0.058   solute carrier family 26, member 8 isoform b 
SLC26A1               0.033   solute carrier family 26, member 1 isoform b 
RPAP1                 0.005   RNA polymerase II associated protein 1 
UBAP2L                0.005   ubiquitin associated protein 2-like isoform a [Homo...
UBAP2L                0.005   ubiquitin associated protein 2-like isoform b [Homo...
NKAIN3                0.005   Na+/K+ transporting ATPase interacting 3 
SLC10A7               0.004   solute carrier family 10 (sodium/bile acid cotranspo...
SCN5A                 0.004   voltage-gated sodium channel type V alpha isoform f...
SCN5A                 0.004   voltage-gated sodium channel type V alpha isoform a ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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