SYCP3 23657

Name: SYCP3	Sequence: fasta or formatted (236aa)		NCBI GI: 24233580
Description: synaptonemal complex protein 3		Referenced in: Spindle, M phase, and Meiosis
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.2 10 1 C cysteine 0.0 0 0 D aspartate 4.7 11 1 E glutamate 10.6 25 2 F phenylalanine 3.4 8 1 G glycine 4.2 10 2 H histidine 0.8 2 1 I isoleucine 4.7 11 1 K lysine 12.7 30 2 L leucine 8.5 20 2 M methionine 5.1 12 2 N asparagine 3.4 8 1 P proline 0.4 1 1 Q glutamine 12.3 29 3 R arginine 5.1 12 2 S serine 7.6 18 2 T threonine 4.2 10 1 V valine 5.1 12 2 W tryptophan 0.8 2 1 Y tyrosine 2.1 5 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 synaptonemal complex protein 3 FAM9B 0.120 family with sequence similarity 9, member B FAM9C 0.093 family with sequence similarity 9, member C FAM9A 0.060 family with sequence similarity 9, member A SYCP2 0.056 synaptonemal complex protein 2 SLK 0.053 serine/threonine kinase 2 KIF3A 0.053 kinesin family member 3A ZNF853 0.051 zinc finger protein 853 KIF16B 0.049 kinesin-like motor protein C20orf23 LOC440243 0.044 PREDICTED: Putative golgin subfamily A member 6-lik... ALS2CR12 0.042 amyotrophic lateral sclerosis 2 (juvenile) chromoso... LOC400352 0.042 PREDICTED: similar to Putative golgin subfamily A m... HDAC4 0.039 histone deacetylase 4 SDCCAG8 0.039 serologically defined colon cancer antigen 8 LOC100132816 0.039 PREDICTED: similar to Putative golgin subfamily A m... SYCP1 0.039 synaptonemal complex protein 1 ALS2CR12 0.039 amyotrophic lateral sclerosis 2 (juvenile) chromoso... MAML2 0.037 mastermind-like 2 MYH9 0.035 myosin, heavy polypeptide 9, non-muscle TNIP1 0.035 TNFAIP3 interacting protein 1 LOC653073 0.035 PREDICTED: Golgin subfamily A member 8-like protein... LOC653073 0.035 PREDICTED: Golgin subfamily A member 8-like protein... CCDC40 0.035 coiled-coil domain containing 40 GRIPAP1 0.035 GRIP1 associated protein 1 isoform 2 GRIPAP1 0.035 GRIP1 associated protein 1 isoform 1 DZIP1L 0.035 DAZ interacting protein 1-like LOC283767 0.035 golgi autoantigen, golgin subfamily a-like HDAC5 0.035 histone deacetylase 5 isoform 3 HDAC5 0.035 histone deacetylase 5 isoform 1 LOC100133758 0.035 PREDICTED: hypothetical protein, partial Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.