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Search of human proteins with 216548627
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|216548627 hairy and enhancer of split 4 isoform 1 [Homo
sapiens]
(247 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|216548627 hairy and enhancer of split 4 isoform 1 [Homo sapiens] 496 e-141
gi|10863967 hairy and enhancer of split 4 isoform 2 [Homo sapiens] 428 e-120
gi|5031763 hairy and enhancer of split 1 [Homo sapiens] 222 3e-58
gi|63055047 hairy and enhancer of split homolog 2 [Homo sapiens] 112 4e-25
gi|145207994 hairy and enhancer of split 7 [Homo sapiens] 96 2e-20
gi|7657154 hairy/enhancer-of-split related with YRPW motif-like ... 92 3e-19
gi|218751874 hairy and enhancer of split 6 isoform b [Homo sapiens] 89 4e-18
gi|21361763 hairy and enhancer of split 6 isoform a [Homo sapiens] 89 5e-18
gi|105990528 hairy/enhancer-of-split related with YRPW motif 1 i... 87 1e-17
gi|105990526 hairy/enhancer-of-split related with YRPW motif 1 i... 85 7e-17
gi|6912414 hairy/enhancer-of-split related with YRPW motif 2 [Ho... 84 1e-16
gi|66912172 hairy and enhancer of split 3 [Homo sapiens] 79 3e-15
gi|58219048 hairy and enhancer of split 5 [Homo sapiens] 78 6e-15
gi|13540521 basic helix-loop-helix domain containing, class B, 3... 63 3e-10
gi|4503299 basic helix-loop-helix family, member e40 [Homo sapiens] 61 8e-10
gi|71274142 HES/HEY-like transcription factor [Homo sapiens] 49 4e-06
gi|145309322 insulinoma-associated protein IA-6 [Homo sapiens] 42 5e-04
gi|119703742 vitelliform macular dystrophy 2-like 1 [Homo sapiens] 40 0.001
gi|45120115 hypothetical protein LOC56905 [Homo sapiens] 40 0.002
gi|91208437 GEM interacting protein [Homo sapiens] 40 0.002
gi|9945318 MAX binding protein [Homo sapiens] 39 0.003
gi|8924248 SRY-box 18 [Homo sapiens] 39 0.005
gi|29789008 Huntingtin interacting protein C isoform 2 [Homo sap... 39 0.005
gi|72534686 Huntingtin interacting protein C isoform 1 [Homo sap... 39 0.005
gi|192807323 SWI/SNF-related matrix-associated actin-dependent r... 38 0.007
gi|192807320 SWI/SNF-related matrix-associated actin-dependent r... 38 0.007
gi|192807318 SWI/SNF-related matrix-associated actin-dependent r... 38 0.007
gi|192807316 SWI/SNF-related matrix-associated actin-dependent r... 38 0.007
gi|192807314 SWI/SNF-related matrix-associated actin-dependent r... 38 0.007
gi|192807312 SWI/SNF-related matrix-associated actin-dependent r... 38 0.007
>gi|216548627 hairy and enhancer of split 4 isoform 1 [Homo sapiens]
Length = 247
Score = 496 bits (1278), Expect = e-141
Identities = 247/247 (100%), Positives = 247/247 (100%)
Query: 1 MAADTPGKPSASPMAGAPASASRTPDKPRSAAEHRKVGSRPGVRGATGGREGRGTQPVPD 60
MAADTPGKPSASPMAGAPASASRTPDKPRSAAEHRKVGSRPGVRGATGGREGRGTQPVPD
Sbjct: 1 MAADTPGKPSASPMAGAPASASRTPDKPRSAAEHRKVGSRPGVRGATGGREGRGTQPVPD 60
Query: 61 PQSSKPVMEKRRRARINESLAQLKTLILDALRKESSRHSKLEKADILEMTVRHLRSLRRV 120
PQSSKPVMEKRRRARINESLAQLKTLILDALRKESSRHSKLEKADILEMTVRHLRSLRRV
Sbjct: 61 PQSSKPVMEKRRRARINESLAQLKTLILDALRKESSRHSKLEKADILEMTVRHLRSLRRV 120
Query: 121 QVTAALSADPAVLGKYRAGFHECLAEVNRFLAGCEGVPADVRSRLLGHLAACLRQLGPSR 180
QVTAALSADPAVLGKYRAGFHECLAEVNRFLAGCEGVPADVRSRLLGHLAACLRQLGPSR
Sbjct: 121 QVTAALSADPAVLGKYRAGFHECLAEVNRFLAGCEGVPADVRSRLLGHLAACLRQLGPSR 180
Query: 181 RPASLSPAAPAEAPAPEVYAGRPLLPSLGGPFPLLAPPLLPGLTRALPAAPRAGPQGPGG 240
RPASLSPAAPAEAPAPEVYAGRPLLPSLGGPFPLLAPPLLPGLTRALPAAPRAGPQGPGG
Sbjct: 181 RPASLSPAAPAEAPAPEVYAGRPLLPSLGGPFPLLAPPLLPGLTRALPAAPRAGPQGPGG 240
Query: 241 PWRPWLR 247
PWRPWLR
Sbjct: 241 PWRPWLR 247
>gi|10863967 hairy and enhancer of split 4 isoform 2 [Homo sapiens]
Length = 221
Score = 428 bits (1100), Expect = e-120
Identities = 221/247 (89%), Positives = 221/247 (89%), Gaps = 26/247 (10%)
Query: 1 MAADTPGKPSASPMAGAPASASRTPDKPRSAAEHRKVGSRPGVRGATGGREGRGTQPVPD 60
MAADTPGKPSASPMAGAPASASRTPDKPRSAAEHRK
Sbjct: 1 MAADTPGKPSASPMAGAPASASRTPDKPRSAAEHRK------------------------ 36
Query: 61 PQSSKPVMEKRRRARINESLAQLKTLILDALRKESSRHSKLEKADILEMTVRHLRSLRRV 120
SSKPVMEKRRRARINESLAQLKTLILDALRKESSRHSKLEKADILEMTVRHLRSLRRV
Sbjct: 37 --SSKPVMEKRRRARINESLAQLKTLILDALRKESSRHSKLEKADILEMTVRHLRSLRRV 94
Query: 121 QVTAALSADPAVLGKYRAGFHECLAEVNRFLAGCEGVPADVRSRLLGHLAACLRQLGPSR 180
QVTAALSADPAVLGKYRAGFHECLAEVNRFLAGCEGVPADVRSRLLGHLAACLRQLGPSR
Sbjct: 95 QVTAALSADPAVLGKYRAGFHECLAEVNRFLAGCEGVPADVRSRLLGHLAACLRQLGPSR 154
Query: 181 RPASLSPAAPAEAPAPEVYAGRPLLPSLGGPFPLLAPPLLPGLTRALPAAPRAGPQGPGG 240
RPASLSPAAPAEAPAPEVYAGRPLLPSLGGPFPLLAPPLLPGLTRALPAAPRAGPQGPGG
Sbjct: 155 RPASLSPAAPAEAPAPEVYAGRPLLPSLGGPFPLLAPPLLPGLTRALPAAPRAGPQGPGG 214
Query: 241 PWRPWLR 247
PWRPWLR
Sbjct: 215 PWRPWLR 221
>gi|5031763 hairy and enhancer of split 1 [Homo sapiens]
Length = 280
Score = 222 bits (565), Expect = 3e-58
Identities = 129/243 (53%), Positives = 151/243 (62%), Gaps = 43/243 (17%)
Query: 1 MAADTPGKPSASPMAGAPASASRTPDKPRSAAEHRKVGSRPGVRGATGGREGRGTQPVPD 60
M AD K S+SP+A PAS + TPDKP++A+EHRK
Sbjct: 1 MPADIMEKNSSSPVAATPASVNTTPDKPKTASEHRK------------------------ 36
Query: 61 PQSSKPVMEKRRRARINESLAQLKTLILDALRKESSRHSKLEKADILEMTVRHLRSLRRV 120
SSKP+MEKRRRARINESL+QLKTLILDAL+K+SSRHSKLEKADILEMTV+HLR+L+R
Sbjct: 37 --SSKPIMEKRRRARINESLSQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQRA 94
Query: 121 QVTAALSADPAVLGKYRAGFHECLAEVNRFLAGCEGVPADVRSRLLGHLAACLRQLGPSR 180
Q+TAALS DP+VLGKYRAGF EC+ EV RFL+ CEGV +VR+RLLGHLA C+ Q+
Sbjct: 95 QMTAALSTDPSVLGKYRAGFSECMNEVTRFLSTCEGVNTEVRTRLLGHLANCMTQINAMT 154
Query: 181 RPASLSPAAPAEAPAPEVYAGRPLLPSLGGP--FPLLAPPLLPGLTRALPAAPRAGPQGP 238
P PA A P P P GGP P PP L +P A P
Sbjct: 155 YPGQPHPALQAPPPPP---------PGPGGPQHAPFAPPPPL------VPIPGGAAPPPG 199
Query: 239 GGP 241
G P
Sbjct: 200 GAP 202
>gi|63055047 hairy and enhancer of split homolog 2 [Homo sapiens]
Length = 173
Score = 112 bits (279), Expect = 4e-25
Identities = 79/186 (42%), Positives = 99/186 (53%), Gaps = 29/186 (15%)
Query: 62 QSSKPVMEKRRRARINESLAQLKTLILDALRKESSRHSKLEKADILEMTVRHLRSLRRVQ 121
+S KP++EKRRRARIN+SL+QLK LIL L +E+S SKLEKAD+LEMTVR L+ L
Sbjct: 15 KSLKPLLEKRRRARINQSLSQLKGLILPLLGRENSNCSKLEKADVLEMTVRFLQEL---P 71
Query: 122 VTAALSADPAVLGKYRAGFHECLAEVNRFLAGCEGVPADVRSRLLGHL--AACLRQLGPS 179
++ +A P YR G+ C+A + R L C + V +RLL HL A L
Sbjct: 72 ASSWPTAAPLPCDSYREGYSACVARLARVLPACRVLEPAVSARLLEHLWRRAASATLDGG 131
Query: 180 RRPASLSPAAPAEAPAPEVYAGRPLLPSLGGPFPLLAPPLLPGLTRALPAAPRAGPQGPG 239
R S P+APA APA P P AP +P P +P GP
Sbjct: 132 RAGDSSGPSAPAPAPA-------------SAPEPASAP--VPS-----PPSPPCGP---- 167
Query: 240 GPWRPW 245
G WRPW
Sbjct: 168 GLWRPW 173
>gi|145207994 hairy and enhancer of split 7 [Homo sapiens]
Length = 225
Score = 96.3 bits (238), Expect = 2e-20
Identities = 80/217 (36%), Positives = 104/217 (47%), Gaps = 37/217 (17%)
Query: 61 PQSSKPVMEKRRRARINESLAQLKTLILDALRKESSRHSKLEKADILEMTVRHLRSLRRV 120
P+ KP++EKRRR RIN SL +L+ L+L+ R ++ R+ KLEKA+ILE V +LR RV
Sbjct: 13 PKMLKPLVEKRRRDRINRSLEELRLLLLERTRDQNLRNPKLEKAEILEFAVGYLRERSRV 72
Query: 121 Q----VTAALSADPAVLGKYRAGFHECLAEVNRFLAGCEGVPADVRSRLLGHLAACLRQL 176
+ + + A+ Y +GF ECL + F + PA R++L L LR
Sbjct: 73 EPPGVPRSPVQDAEALASCYLSGFRECLLRLAAF--AHDASPA-ARAQLFSALHGYLRPK 129
Query: 177 GPSRRPA---------SLSPAAPAEAPA----PEVYAGRP-----LLPSL--------GG 210
P +P SL PAAPA PA P V+ G P PSL G
Sbjct: 130 PPRPKPVDPRPPAPRPSLDPAAPALGPALHQRPPVHQGHPSPRCAWSPSLCSPRAGDSGA 189
Query: 211 PFPL--LAPPLLPGLTRALPAAPRAGPQGPGGPWRPW 245
P PL L PP P AP+A P WRPW
Sbjct: 190 PAPLTGLLPP--PPPPHRQDGAPKAPLPPPPAFWRPW 224
>gi|7657154 hairy/enhancer-of-split related with YRPW motif-like
[Homo sapiens]
Length = 328
Score = 92.4 bits (228), Expect = 3e-19
Identities = 74/202 (36%), Positives = 103/202 (50%), Gaps = 28/202 (13%)
Query: 49 GREGRGTQ---PVPDPQSS--------KPVMEKRRRARINESLAQLKTLILDALRKESSR 97
G+EG+ +Q P+ P SS + ++EKRRR RIN SL++L+ L+ A K+ S
Sbjct: 21 GQEGQLSQMARPLSTPSSSQMQARKKRRGIIEKRRRDRINSSLSELRRLVPTAFEKQGS- 79
Query: 98 HSKLEKADILEMTVRHLRSLRRVQVTAALSADPAVLGKYRAGFHECLAEVNRFLAGCEGV 157
SKLEKA++L+MTV HL+ L T A + GF ECL EV R+L EG
Sbjct: 80 -SKLEKAEVLQMTVDHLKMLHATGGTGFFDARALAVDFRSIGFRECLTEVIRYLGVLEGP 138
Query: 158 PA---DVRSRLLGHLAACLRQLGPSRRPASLSPAAPAEAPA--PEVYAGRPLLPSLGGPF 212
+ VR RLL HL + ++ PS +P P PA + P LP+L
Sbjct: 139 SSRADPVRIRLLSHLNSYAAEMEPSP-----TPTGPLAFPAWPWSFFHSCPGLPALSNQL 193
Query: 213 PLLA---PPLLPGLTRALPAAP 231
+L P+LPG++ PA P
Sbjct: 194 AILGRVPSPVLPGVSS--PAYP 213
Score = 28.9 bits (63), Expect = 4.3
Identities = 27/86 (31%), Positives = 32/86 (37%), Gaps = 5/86 (5%)
Query: 164 RLLGHLAACLRQLGPSRRPASLSPAAPAEAPA---PEVYAGRPLLPSLGGPFPLLAPPLL 220
R G + R + PSR +S A P E PA P + R S P + P
Sbjct: 224 RATGIILPARRNVLPSRGASSTRRARPLERPATPVPVAPSSRAARSSHIAPLLQSSSPTP 283
Query: 221 PGLT--RALPAAPRAGPQGPGGPWRP 244
PG T A A P PG RP
Sbjct: 284 PGPTGSAAYVAVPTPNSSSPGPAGRP 309
>gi|218751874 hairy and enhancer of split 6 isoform b [Homo sapiens]
Length = 222
Score = 89.0 bits (219), Expect = 4e-18
Identities = 69/228 (30%), Positives = 102/228 (44%), Gaps = 35/228 (15%)
Query: 41 PGVRGATGGREGRGTQPVPDPQSSKPVMEKRRRARINESLAQLKTLILDALRKESSRHSK 100
PG R G + G + D ++ KP++EK+RRARINESL +L+ L+ A +K
Sbjct: 7 PG-RDRVGREDEDGWETRGDRKARKPLVEKKRRARINESLQELRLLLAGA-------EAK 58
Query: 101 LEKADILEMTVRHLRSLRRVQVTAALSADPAVLGKYRAGFHECLAEVNRFLAGCEGVPAD 160
LE A++LE+TVR ++ + R + ++ AG+ +C+ EV+ F++ C+ + A
Sbjct: 59 LENAEVLELTVRRVQGVLRGRAREREQLQAEASERFAAGYIQCMHEVHTFVSTCQAIDAT 118
Query: 161 VRSRLLGHLAACLRQLGPSRRPASLS----------PAAPAEAPAPEVYAGRPLLPSLGG 210
V + LL HL + P R +S P AP + P A +PS G
Sbjct: 119 VAAELLNHLLESM----PLREGSSFQDLLGDALAGPPRAPGRSGWPAGGAPGSPIPSPPG 174
Query: 211 PFPLLAPPLLPGLTRALPAAPRAGP-------------QGPGGPWRPW 245
P L L L AP GP Q WRPW
Sbjct: 175 PGDDLCSDLEEAPEAELSQAPAEGPDLVPAALGSLTTAQIARSVWRPW 222
>gi|21361763 hairy and enhancer of split 6 isoform a [Homo sapiens]
Length = 224
Score = 88.6 bits (218), Expect = 5e-18
Identities = 69/228 (30%), Positives = 102/228 (44%), Gaps = 33/228 (14%)
Query: 41 PGVRGATGGREGRGTQPVPDPQSSKPVMEKRRRARINESLAQLKTLILDALRKESSRHSK 100
PG R G + G + D ++ KP++EK+RRARINESL +L+ L+ A +K
Sbjct: 7 PG-RDRVGREDEDGWETRGDRKARKPLVEKKRRARINESLQELRLLLAGA-----EVQAK 60
Query: 101 LEKADILEMTVRHLRSLRRVQVTAALSADPAVLGKYRAGFHECLAEVNRFLAGCEGVPAD 160
LE A++LE+TVR ++ + R + ++ AG+ +C+ EV+ F++ C+ + A
Sbjct: 61 LENAEVLELTVRRVQGVLRGRAREREQLQAEASERFAAGYIQCMHEVHTFVSTCQAIDAT 120
Query: 161 VRSRLLGHLAACLRQLGPSRRPASLS----------PAAPAEAPAPEVYAGRPLLPSLGG 210
V + LL HL + P R +S P AP + P A +PS G
Sbjct: 121 VAAELLNHLLESM----PLREGSSFQDLLGDALAGPPRAPGRSGWPAGGAPGSPIPSPPG 176
Query: 211 PFPLLAPPLLPGLTRALPAAPRAGP-------------QGPGGPWRPW 245
P L L L AP GP Q WRPW
Sbjct: 177 PGDDLCSDLEEAPEAELSQAPAEGPDLVPAALGSLTTAQIARSVWRPW 224
>gi|105990528 hairy/enhancer-of-split related with YRPW motif 1
isoform a [Homo sapiens]
Length = 304
Score = 87.4 bits (215), Expect = 1e-17
Identities = 74/193 (38%), Positives = 93/193 (48%), Gaps = 21/193 (10%)
Query: 67 VMEKRRRARINESLAQLKTLILDALRKESSRHSKLEKADILEMTVRHLRSLRRVQVTAAL 126
++EKRRR RIN SL++L+ L+ A K+ S +KLEKA+IL+MTV HL+ L
Sbjct: 56 IIEKRRRDRINNSLSELRRLVPSAFEKQGS--AKLEKAEILQMTVDHLKMLHTAGGKGYF 113
Query: 127 SADPAVLGKYRAGFHECLAEVNRFLAGCEGVPAD--VRSRLLGHLAACLRQLGPSRRPAS 184
A + GF ECLAEV R+L+ EG+ A +R RL+ H L R AS
Sbjct: 114 DAHALAMDYRSLGFRECLAEVARYLSIIEGLDASDPLRVRLVSH----LNNYASQREAAS 169
Query: 185 LSPAAPAEAPAPEVYAGRP------LLPSLG-GPFPLLAPPLLP----GLTRALPAAP-- 231
+ A P V+ P LLP G G A P P L A P AP
Sbjct: 170 GAHAGLGHIPWGTVFGHHPHIAHPLLLPQNGHGNAGTTASPTEPHHQGRLGSAHPEAPAL 229
Query: 232 RAGPQGPGGPWRP 244
RA P G GP P
Sbjct: 230 RAPPSGSLGPVLP 242
>gi|105990526 hairy/enhancer-of-split related with YRPW motif 1
isoform b [Homo sapiens]
Length = 308
Score = 84.7 bits (208), Expect = 7e-17
Identities = 73/195 (37%), Positives = 92/195 (47%), Gaps = 21/195 (10%)
Query: 67 VMEKRRRARINESLAQLKTLILDALRKESSRH--SKLEKADILEMTVRHLRSLRRVQVTA 124
++EKRRR RIN SL++L+ L+ A K+ +KLEKA+IL+MTV HL+ L
Sbjct: 56 IIEKRRRDRINNSLSELRRLVPSAFEKQVMEQGSAKLEKAEILQMTVDHLKMLHTAGGKG 115
Query: 125 ALSADPAVLGKYRAGFHECLAEVNRFLAGCEGVPAD--VRSRLLGHLAACLRQLGPSRRP 182
A + GF ECLAEV R+L+ EG+ A +R RL+ H L R
Sbjct: 116 YFDAHALAMDYRSLGFRECLAEVARYLSIIEGLDASDPLRVRLVSH----LNNYASQREA 171
Query: 183 ASLSPAAPAEAPAPEVYAGRP------LLPSLG-GPFPLLAPPLLP----GLTRALPAAP 231
AS + A P V+ P LLP G G A P P L A P AP
Sbjct: 172 ASGAHAGLGHIPWGTVFGHHPHIAHPLLLPQNGHGNAGTTASPTEPHHQGRLGSAHPEAP 231
Query: 232 --RAGPQGPGGPWRP 244
RA P G GP P
Sbjct: 232 ALRAPPSGSLGPVLP 246
>gi|6912414 hairy/enhancer-of-split related with YRPW motif 2 [Homo
sapiens]
Length = 337
Score = 83.6 bits (205), Expect = 1e-16
Identities = 49/134 (36%), Positives = 76/134 (56%), Gaps = 4/134 (2%)
Query: 55 TQPVPDPQSSKPVMEKRRRARINESLAQLKTLILDALRKESSRHSKLEKADILEMTVRHL 114
T + + + ++EKRRR RIN SL++L+ L+ A K+ S +KLEKA+IL+MTV HL
Sbjct: 43 TSQIMARKKRRGIIEKRRRDRINNSLSELRRLVPTAFEKQGS--AKLEKAEILQMTVDHL 100
Query: 115 RSLRRVQVTAALSADPAVLGKYRAGFHECLAEVNRFLAGCEGVPAD--VRSRLLGHLAAC 172
+ L+ A + GF ECL EV R+L+ EG+ + +R RL+ HL+ C
Sbjct: 101 KMLQATGGKGYFDAHALAMDFMSIGFRECLTEVARYLSSVEGLDSSDPLRVRLVSHLSTC 160
Query: 173 LRQLGPSRRPASLS 186
Q + +S++
Sbjct: 161 ATQREAAAMTSSMA 174
>gi|66912172 hairy and enhancer of split 3 [Homo sapiens]
Length = 186
Score = 79.3 bits (194), Expect = 3e-15
Identities = 71/189 (37%), Positives = 95/189 (50%), Gaps = 22/189 (11%)
Query: 68 MEKRRRARINESLAQLKTLILDALRKESSRHSKLEKADILEMTVRHLRSLRRVQVTAALS 127
MEK+RRARIN SL QLK+L L+ R KLEKADILE++V+++RSL+ +
Sbjct: 1 MEKKRRARINVSLEQLKSL-LEKHYSHQIRKRKLEKADILELSVKYMRSLQ----NSLQG 55
Query: 128 ADPAVLG-KYRAGFHECLAEVNRFLAGCEGVPADVRSRLLGHLAA--CLRQLGPSRR-PA 183
P G + +GF CL V++ L + V + +R L+ AA + G + PA
Sbjct: 56 LWPVPRGAEQPSGFRSCLPGVSQLLRRGDEVGSGLRCPLVPESAAGSTMDSAGLGQEAPA 115
Query: 184 SLSPAAPAE-APAPEVYAGRPLLPSLGGPFPLLAPPLLPGLTRALPAAPRAGPQGPGGP- 241
P PA APAP AG P P P LL P LPG + ++P A + P
Sbjct: 116 LFRPCTPAVWAPAPA--AGGPRSP----PPLLLLPESLPGSSASVPPPQPASSRCAESPG 169
Query: 242 -----WRPW 245
WRPW
Sbjct: 170 LGLRVWRPW 178
>gi|58219048 hairy and enhancer of split 5 [Homo sapiens]
Length = 166
Score = 78.2 bits (191), Expect = 6e-15
Identities = 71/184 (38%), Positives = 88/184 (47%), Gaps = 41/184 (22%)
Query: 65 KPVMEKRRRARINESLAQLKTLILDALRKESSRH---SKLEKADILEMTVRHLRSLRRVQ 121
KPV+EK RR RIN S+ QLK L L +E +RH SKLEKADILEM V + L+ +
Sbjct: 21 KPVVEKMRRDRINSSIEQLKLL----LEQEFARHQPNSKLEKADILEMAVSY---LKHSK 73
Query: 122 VTAALSADPAVLGKYRAGFHECLAEVNRFLAGCEGVPADVRSRLLGHLAACLRQLGPSRR 181
A + ++ Y G+ CL E +FL +D + +LL H +R
Sbjct: 74 AFVAAAGPKSLHQDYSEGYSWCLQEAVQFLT--LHAASDTQMKLLYHF----------QR 121
Query: 182 PASLSPAAPAEAPAPEVYAGRPLLPSLGGPFPLLAPPLLPGLTRALPAAPRAGPQGPGGP 241
P PAAPA APA E A P APP P L+ AA A Q G
Sbjct: 122 P----PAAPA-APAKEPKA------------PGAAPP--PALSAKATAAAAAAHQPACGL 162
Query: 242 WRPW 245
WRPW
Sbjct: 163 WRPW 166
>gi|13540521 basic helix-loop-helix domain containing, class B, 3
[Homo sapiens]
Length = 482
Score = 62.8 bits (151), Expect = 3e-10
Identities = 58/186 (31%), Positives = 93/186 (50%), Gaps = 24/186 (12%)
Query: 67 VMEKRRRARINESLAQLKTLILDALRKESSRHSKLEKADILEMTVRHLRSL------RRV 120
++EK+RR RINE +AQLK L+ + L+ + H LEKA +LE+T++HL++L +
Sbjct: 51 LIEKKRRDRINECIAQLKDLLPEHLKLTTLGH--LEKAVVLELTLKHLKALTALTEQQHQ 108
Query: 121 QVTAALSADPAV-------LGKYRAGFHECLAEVNRFLAGCEG-VPADVRS-RLLGHLAA 171
++ A + + ++ L + +GF C EV ++L+ E P + R +L+ HL A
Sbjct: 109 KIIALQNGERSLKSPIQSDLDAFHSGFQTCAKEVLQYLSRFESWTPREPRCVQLINHLHA 168
Query: 172 CLRQLGPSRRPASLSPAAPAE----APAPEVYAGRPLLPSLGGPFPLLAPPLLPGLTRAL 227
Q P+ P L+ P AP+ A P L G LA +P + R
Sbjct: 169 VATQFLPT--PQLLTQQVPLSKGTGAPSAAGSAAAPCLERAGQKLEPLA-YCVPVIQRTQ 225
Query: 228 PAAPRA 233
P+A A
Sbjct: 226 PSAELA 231
>gi|4503299 basic helix-loop-helix family, member e40 [Homo sapiens]
Length = 412
Score = 61.2 bits (147), Expect = 8e-10
Identities = 68/233 (29%), Positives = 110/233 (47%), Gaps = 50/233 (21%)
Query: 9 PSASPMAGAPASASRTPDKPRSAAEHRKVGSRPGVRGATGGREGRGTQPVPDPQSSKP-- 66
PSA P PA + P EH G PG+ A + + + + + SK
Sbjct: 5 PSAQP---PPACLPKAP-----GLEH---GDLPGMYPAHMYQVYKSRRGIKRSEDSKETY 53
Query: 67 -----VMEKRRRARINESLAQLKTLILDALRKESSRHSKLEKADILEMTVRHLRSL---- 117
++EK+RR RINE +AQLK L+ + L+ + H LEKA +LE+T++H+++L
Sbjct: 54 KLPHRLIEKKRRDRINECIAQLKDLLPEHLKLTTLGH--LEKAVVLELTLKHVKALTNLI 111
Query: 118 --RRVQVTAALSADPA--VLGK--------YRAGFHECLAEVNRFLAGCEGVPADVRSRL 165
++ ++ A S A + G+ + +GF C EV ++LA E S+L
Sbjct: 112 DQQQQKIIALQSGLQAGELSGRNVETGQEMFCSGFQTCAREVLQYLAKHENTRDLKSSQL 171
Query: 166 LGHLAACLRQL---GPSRRPASLSPAAPAEAPAPEV--YAGRPLLPSLGGPFP 213
+ HL + +L G SR+P+ PAP+V + +P P+ G P
Sbjct: 172 VTHLHRVVSELLQGGTSRKPSD---------PAPKVMDFKEKPSSPAKGSEGP 215
>gi|71274142 HES/HEY-like transcription factor [Homo sapiens]
Length = 327
Score = 48.9 bits (115), Expect = 4e-06
Identities = 66/251 (26%), Positives = 90/251 (35%), Gaps = 71/251 (28%)
Query: 45 GATGGREGRGTQPVPDPQSSKPV----MEKRRRARINESLAQLKTLILDALRKESSRHS- 99
G G+ GT V + + PV +EKRRR RIN L +L + AL K+
Sbjct: 35 GPMAGKCPHGTLSVEESRVRTPVSHKVIEKRRRDRINRCLNELGKTVPMALAKQGEPQEA 94
Query: 100 --------------------------------------KLEKADILEMTVRHLRSLR--- 118
KLEKA+ILEMTV++LR+L
Sbjct: 95 LAQIRSRVRSLVLSSATVPDQQALGRCEGPFLLLQSSGKLEKAEILEMTVQYLRALHSAD 154
Query: 119 --RVQVTAALSADPAVLGKYRAGFHECLAEVNRFLAGCEGVPADVRSRLLGHLAACLRQL 176
R + A L A+ A + G+HEC+ + +L E + + + + A L+
Sbjct: 155 FPRGREKAELLAEFA--NYFHYGYHECMKNLVHYLTTVERM--ETKDTKYARILAFLQ-- 208
Query: 177 GPSRRPASLSPAAPAEAPAPE---VYAGRPLLPSLGGPFPLLAPPLLPGLTRALPAAPRA 233
S+ PA P PE Y P P G PG P A
Sbjct: 209 --SKARLGAEPAFPPLGSLPEPDFSYQLHPAGPEFAGH--------SPGEAAVFPQGSGA 258
Query: 234 GPQGPGGPWRP 244
GP PW P
Sbjct: 259 GP----FPWPP 265
>gi|145309322 insulinoma-associated protein IA-6 [Homo sapiens]
Length = 566
Score = 42.0 bits (97), Expect = 5e-04
Identities = 29/88 (32%), Positives = 37/88 (42%), Gaps = 8/88 (9%)
Query: 2 AADTPGKPSASPMA------GAPASASRTPDKP--RSAAEHRKVGSRPGVRGATGGREGR 53
+A PG A+P G A A+R R+A G R G GGREG
Sbjct: 43 SASLPGAERATPPTREEPGKGLTAEAAREQSGSPCRAAGVSPGTGGREGAEWRAGGREGP 102
Query: 54 GTQPVPDPQSSKPVMEKRRRARINESLA 81
G P P P +KP + RRA + L+
Sbjct: 103 GPSPSPSPSPAKPAGAELRRAFLERCLS 130
>gi|119703742 vitelliform macular dystrophy 2-like 1 [Homo sapiens]
Length = 509
Score = 40.4 bits (93), Expect = 0.001
Identities = 27/69 (39%), Positives = 29/69 (42%), Gaps = 8/69 (11%)
Query: 183 ASLSPAAPAEAPAPEVYAGRPLLPSLGGPFPLLAPP-------LLPGLTRALPAAPRAGP 235
AS S A E APE G PLL G P P PP L+PG GP
Sbjct: 431 ASCSCAVVPEGAAPECSCGDPLLDP-GLPEPEAPPPAGPEPLTLIPGPVEPFSIVTMPGP 489
Query: 236 QGPGGPWRP 244
+GP PW P
Sbjct: 490 RGPAPPWLP 498
>gi|45120115 hypothetical protein LOC56905 [Homo sapiens]
Length = 1047
Score = 40.0 bits (92), Expect = 0.002
Identities = 58/229 (25%), Positives = 91/229 (39%), Gaps = 44/229 (19%)
Query: 18 PASASRTPDKPRSAAEHRKVGSRPGVRGATGGREGRGTQPVPDPQSSKPVMEKRRRARIN 77
P SA+ PD + +E G G RG +EG P SKP+ R +
Sbjct: 527 PDSATAEPDSAPATSE----GQDKGCRGTLPAQEG--------PSGSKPL-----RGSLK 569
Query: 78 ESLAQLKTLILD-ALRKESSRHSKLEKADILEMTVRHLRSLRRVQVTAALSADPAVLGKY 136
E +A LD ++RK ++ S ++ + RS+ + TAA+ D +G
Sbjct: 570 EEVA------LDLSVRKPTAEASPVKAS----------RSVEHAKPTAAM--DVPDVGNM 611
Query: 137 RAGFHECLAEVNRFLAGCEGVPADV----RSRLLGHLAACLRQ---LGPSRRPASLSPAA 189
+ L +++ G GVP R+ +A R+ L P+ PA++ P+
Sbjct: 612 VSDLPG-LKKIDTEAPGLPGVPVTTDAMPRTNFHSSVAFMFRKFKILRPAPLPAAVVPST 670
Query: 190 PAEAPAPEVYAGRPLLPSLGGPFPLLAPPLLPGLTRALPAAPRAGPQGP 238
P APAP A P +G P + + ALP+ P P
Sbjct: 671 PTSAPAPTQPAPTPTSGPIGLRILAQQPLSVTCFSLALPSPPAVAVASP 719
Score = 29.6 bits (65), Expect = 2.5
Identities = 31/98 (31%), Positives = 39/98 (39%), Gaps = 15/98 (15%)
Query: 15 AGAPASASRTP--DKPRSAA--------EHRKVGSRPGVRG-----ATGGREGRGTQPVP 59
AGA +S+ T D+P S A + RK G +P G A G E G P P
Sbjct: 932 AGAVSSSEPTVARDEPESLALAQKSPAPKVRKPGRKPPTPGPEKAEAAAGEESCGASPTP 991
Query: 60 DPQSSKPVMEKRRRARINESLAQLKTLILDALRKESSR 97
+S P + R R A L L L +SSR
Sbjct: 992 ATSASPPGPTLKARFRSLLETAWLNGLALPTWGHKSSR 1029
>gi|91208437 GEM interacting protein [Homo sapiens]
Length = 970
Score = 39.7 bits (91), Expect = 0.002
Identities = 58/209 (27%), Positives = 77/209 (36%), Gaps = 44/209 (21%)
Query: 48 GGREGRGTQPVPDPQSSKPVMEKRRRARINESLAQLKTLILDALRKESSRHSKLEKADI- 106
G E Q P P + E+RRR+R AQ K +AL + R + + D+
Sbjct: 233 GSPEDSAPQASPGPSKQQ---ERRRRSREE---AQAKAQEAEALYQACVREANARQQDLE 286
Query: 107 --LEMTVRHLRSLRRVQVTAALSADPAVLGKYRAGFHECLAEVNRFLAGCEGVPADVRSR 164
+ V H+R L D E L V L G G A+ R
Sbjct: 287 IAKQRIVSHVRKL-------VFQGD------------EVLRRVTLSLFGLRGAQAERGPR 327
Query: 165 LLGHLAACLRQLGPSRR----PASLSPAAPAEAPAPEVYAGRPLLPSLGGPFPL-----L 215
LA C P +R +L P AP P P ++ + LPSL PL L
Sbjct: 328 AFAALAECCAPFEPGQRYQEFVRALRPEAP--PPPPPAFSFQEFLPSLNSS-PLDIRKKL 384
Query: 216 APPLLPGLTRALPAAPRAGP-QGPGGPWR 243
+ PL P L + GP + PG WR
Sbjct: 385 SGPLPPRLDE---NSAEPGPWEDPGTGWR 410
>gi|9945318 MAX binding protein [Homo sapiens]
Length = 582
Score = 39.3 bits (90), Expect = 0.003
Identities = 24/56 (42%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
Query: 182 PASLSPAAPAEAPAPEVYAGRPL----LPSL-GGPFPLLAPPLLPGLTRALPAAPR 232
P LSP AP AP P + PL +P + P PL PP LP + LP APR
Sbjct: 64 PLPLSPPAPPPAPPPPLATPAPLTVIPIPVVTNSPQPLPPPPPLPAAAQPLPLAPR 119
Score = 30.4 bits (67), Expect = 1.5
Identities = 31/118 (26%), Positives = 49/118 (41%), Gaps = 22/118 (18%)
Query: 3 ADTPG-KPSASPMAGAPASASRTPDKPRSAAEHRKVGSRPGVRGATGGREGRGTQPVPDP 61
A PG +P +P P + P + + RPG G GT+ V +
Sbjct: 177 APHPGVQPQLAPQQPPPPTLGTLKLAPAEEVKSSEQKKRPG---------GIGTREVHNK 227
Query: 62 QSSKPVMEKRRRARINESLAQLKTLILDALRKESSRHSKLEKADILEMTVRHLRSLRR 119
+EK RRA + E LK I + K++S S +L +R+++SL+R
Sbjct: 228 ------LEKNRRAHLKECFETLKRNIPNVDDKKTSNLS------VLRTALRYIQSLKR 273
Score = 28.5 bits (62), Expect = 5.6
Identities = 20/65 (30%), Positives = 25/65 (38%), Gaps = 5/65 (7%)
Query: 180 RRPASLSPAAPAEAPAPEVYAGRPLLPSLGGPFPLLAPPLLPGLTRALPAAPRAGPQGPG 239
+ PA L PAP + + +P G P PL P T L AP G Q
Sbjct: 132 KEPAPLPSRPQVPTPAPLLPDSKATIPPNGSPKPLQPLP-----TPVLTIAPHPGVQPQL 186
Query: 240 GPWRP 244
P +P
Sbjct: 187 APQQP 191
>gi|8924248 SRY-box 18 [Homo sapiens]
Length = 384
Score = 38.5 bits (88), Expect = 0.005
Identities = 73/270 (27%), Positives = 96/270 (35%), Gaps = 54/270 (20%)
Query: 2 AADTPGKPSASPMAGAPASASRTPDKPRS---AAEHRKVGSRPGVRGATGGREGRGTQPV 58
AADT G + APA+ + P RS + E + G P RG R+ +
Sbjct: 29 AADTRGLAAGPAALAAPAAPASPPSPQRSPPRSPEPGRYGLSPAGRGE---RQAADESRI 85
Query: 59 PDPQSSKPVMEKRRRARINESLAQLKTLILD-ALRKESSRHSKLEKADILE----MTVRH 113
P ++ V K R R+ + L +L L K + EK +E + V+H
Sbjct: 86 RRPMNAFMVWAKDERKRLAQQNPDLHNAVLSKMLGKAWKELNAAEKRPFVEEAERLRVQH 145
Query: 114 LRS--------LRRVQVTAALSADPAVL------------------GKYRAGFHECLAEV 147
LR R+ Q A +P +L G RA F E L +
Sbjct: 146 LRDHPNYKYRPRRKKQARKARRLEPGLLLPGLAPPQPPPEPFPAASGSARA-FRE-LPPL 203
Query: 148 NRFLAGCEGVPADVRSRLLGHLAACLRQLGPSRRPASLSPAAPAEA---PAPEVYAGRPL 204
G G+P RS L G L P PAAP + P YA L
Sbjct: 204 GAEFDGL-GLPTPERSPLDG--------LEPGEAAFFPPPAAPEDCALRPFRAPYAPTEL 254
Query: 205 LPSLGGPFPLLAPPLLPGLTRALPAAPRAG 234
GG + PL L A PAAP AG
Sbjct: 255 SRDPGGCY---GAPLAEALRTAPPAAPLAG 281
>gi|29789008 Huntingtin interacting protein C isoform 2 [Homo
sapiens]
Length = 858
Score = 38.5 bits (88), Expect = 0.005
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 15/66 (22%)
Query: 179 SRRPASLSPAAPAEAPAPEVYAGRPLLPSLGGPFPL-----LAPPLLPGLTRALPAAPRA 233
S+RP ++ P P P P+LP +G P PL + PP++PG+ +PA P
Sbjct: 19 SQRPPAIPPMPPGILP--------PMLPPMGAPPPLTQIPGMVPPMMPGM--LMPAVPVT 68
Query: 234 GPQGPG 239
PG
Sbjct: 69 AATAPG 74
>gi|72534686 Huntingtin interacting protein C isoform 1 [Homo
sapiens]
Length = 871
Score = 38.5 bits (88), Expect = 0.005
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 15/66 (22%)
Query: 179 SRRPASLSPAAPAEAPAPEVYAGRPLLPSLGGPFPL-----LAPPLLPGLTRALPAAPRA 233
S+RP ++ P P P P+LP +G P PL + PP++PG+ +PA P
Sbjct: 25 SQRPPAIPPMPPGILP--------PMLPPMGAPPPLTQIPGMVPPMMPGM--LMPAVPVT 74
Query: 234 GPQGPG 239
PG
Sbjct: 75 AATAPG 80
>gi|192807323 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform A [Homo sapiens]
Length = 1679
Score = 38.1 bits (87), Expect = 0.007
Identities = 36/134 (26%), Positives = 55/134 (41%), Gaps = 22/134 (16%)
Query: 128 ADPAVLGKYRAG--------FHECLAEVNRF--LAGCEGVPADVRSRLLGHLAAC-LRQL 176
ADP LG+ G H+ A++ + LA + +P ++ + G ++Q
Sbjct: 157 ADPQALGQQNRGPTPFNQNQLHQLRAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQ 216
Query: 177 GPSRRPASLSPAAPAEAPAPEVYAGR-PLLPSLGGPF----PLLAPPLLPGLTRALPAAP 231
P+ P S+S P P P G P P+ P P + PP G+ +P P
Sbjct: 217 MPTLPPPSVSATGPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQP 276
Query: 232 RAGPQGPGGPWRPW 245
PGGP +PW
Sbjct: 277 ------PGGPPKPW 284
>gi|192807320 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform F [Homo sapiens]
Length = 1613
Score = 38.1 bits (87), Expect = 0.007
Identities = 36/134 (26%), Positives = 55/134 (41%), Gaps = 22/134 (16%)
Query: 128 ADPAVLGKYRAG--------FHECLAEVNRF--LAGCEGVPADVRSRLLGHLAAC-LRQL 176
ADP LG+ G H+ A++ + LA + +P ++ + G ++Q
Sbjct: 157 ADPQALGQQNRGPTPFNQNQLHQLRAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQ 216
Query: 177 GPSRRPASLSPAAPAEAPAPEVYAGR-PLLPSLGGPF----PLLAPPLLPGLTRALPAAP 231
P+ P S+S P P P G P P+ P P + PP G+ +P P
Sbjct: 217 MPTLPPPSVSATGPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQP 276
Query: 232 RAGPQGPGGPWRPW 245
PGGP +PW
Sbjct: 277 ------PGGPPKPW 284
>gi|192807318 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform E [Homo sapiens]
Length = 1614
Score = 38.1 bits (87), Expect = 0.007
Identities = 36/134 (26%), Positives = 55/134 (41%), Gaps = 22/134 (16%)
Query: 128 ADPAVLGKYRAG--------FHECLAEVNRF--LAGCEGVPADVRSRLLGHLAAC-LRQL 176
ADP LG+ G H+ A++ + LA + +P ++ + G ++Q
Sbjct: 157 ADPQALGQQNRGPTPFNQNQLHQLRAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQ 216
Query: 177 GPSRRPASLSPAAPAEAPAPEVYAGR-PLLPSLGGPF----PLLAPPLLPGLTRALPAAP 231
P+ P S+S P P P G P P+ P P + PP G+ +P P
Sbjct: 217 MPTLPPPSVSATGPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQP 276
Query: 232 RAGPQGPGGPWRPW 245
PGGP +PW
Sbjct: 277 ------PGGPPKPW 284
>gi|192807316 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform D [Homo sapiens]
Length = 1616
Score = 38.1 bits (87), Expect = 0.007
Identities = 36/134 (26%), Positives = 55/134 (41%), Gaps = 22/134 (16%)
Query: 128 ADPAVLGKYRAG--------FHECLAEVNRF--LAGCEGVPADVRSRLLGHLAAC-LRQL 176
ADP LG+ G H+ A++ + LA + +P ++ + G ++Q
Sbjct: 157 ADPQALGQQNRGPTPFNQNQLHQLRAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQ 216
Query: 177 GPSRRPASLSPAAPAEAPAPEVYAGR-PLLPSLGGPF----PLLAPPLLPGLTRALPAAP 231
P+ P S+S P P P G P P+ P P + PP G+ +P P
Sbjct: 217 MPTLPPPSVSATGPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQP 276
Query: 232 RAGPQGPGGPWRPW 245
PGGP +PW
Sbjct: 277 ------PGGPPKPW 284
>gi|192807314 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform C [Homo sapiens]
Length = 1617
Score = 38.1 bits (87), Expect = 0.007
Identities = 36/134 (26%), Positives = 55/134 (41%), Gaps = 22/134 (16%)
Query: 128 ADPAVLGKYRAG--------FHECLAEVNRF--LAGCEGVPADVRSRLLGHLAAC-LRQL 176
ADP LG+ G H+ A++ + LA + +P ++ + G ++Q
Sbjct: 157 ADPQALGQQNRGPTPFNQNQLHQLRAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQ 216
Query: 177 GPSRRPASLSPAAPAEAPAPEVYAGR-PLLPSLGGPF----PLLAPPLLPGLTRALPAAP 231
P+ P S+S P P P G P P+ P P + PP G+ +P P
Sbjct: 217 MPTLPPPSVSATGPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQP 276
Query: 232 RAGPQGPGGPWRPW 245
PGGP +PW
Sbjct: 277 ------PGGPPKPW 284
>gi|192807312 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform B [Homo sapiens]
Length = 1647
Score = 38.1 bits (87), Expect = 0.007
Identities = 36/134 (26%), Positives = 55/134 (41%), Gaps = 22/134 (16%)
Query: 128 ADPAVLGKYRAG--------FHECLAEVNRF--LAGCEGVPADVRSRLLGHLAAC-LRQL 176
ADP LG+ G H+ A++ + LA + +P ++ + G ++Q
Sbjct: 157 ADPQALGQQNRGPTPFNQNQLHQLRAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQ 216
Query: 177 GPSRRPASLSPAAPAEAPAPEVYAGR-PLLPSLGGPF----PLLAPPLLPGLTRALPAAP 231
P+ P S+S P P P G P P+ P P + PP G+ +P P
Sbjct: 217 MPTLPPPSVSATGPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQP 276
Query: 232 RAGPQGPGGPWRPW 245
PGGP +PW
Sbjct: 277 ------PGGPPKPW 284
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.134 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,012,403
Number of Sequences: 37866
Number of extensions: 733739
Number of successful extensions: 8335
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 140
Number of HSP's successfully gapped in prelim test: 570
Number of HSP's that attempted gapping in prelim test: 6538
Number of HSP's gapped (non-prelim): 2343
length of query: 247
length of database: 18,247,518
effective HSP length: 100
effective length of query: 147
effective length of database: 14,460,918
effective search space: 2125754946
effective search space used: 2125754946
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.