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Search of human proteins with 211063479
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|211063479 major facilitator superfamily domain containing 2
isoform 1 [Homo sapiens]
(543 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|211063479 major facilitator superfamily domain containing 2 i... 1085 0.0
gi|42713696 major facilitator superfamily domain containing 2 is... 1049 0.0
gi|122937339 major facilitator superfamily domain-containing pro... 376 e-104
gi|111378391 hypothetical protein LOC126321 isoform c [Homo sapi... 48 2e-05
gi|111378395 hypothetical protein LOC126321 isoform b [Homo sapi... 48 2e-05
gi|111378386 hypothetical protein LOC126321 isoform a [Homo sapi... 48 2e-05
gi|161377472 cyclin A1 isoform c [Homo sapiens] 31 2.5
gi|161377470 cyclin A1 isoform c [Homo sapiens] 31 2.5
gi|161377468 cyclin A1 isoform b [Homo sapiens] 31 2.5
gi|4502611 cyclin A1 isoform a [Homo sapiens] 31 2.5
gi|67782317 solute carrier family 6 member 9 isoform 3 [Homo sap... 30 4.3
gi|67782315 solute carrier family 6 member 9 isoform 2 [Homo sap... 30 4.3
gi|67782313 solute carrier family 6 member 9 isoform 1 [Homo sap... 30 4.3
gi|8923532 CLN6 protein [Homo sapiens] 30 5.6
gi|13376097 NIPA-like domain containing 2 [Homo sapiens] 30 5.6
gi|125987596 sodium bicarbonate transporter 4 isoform a [Homo sa... 29 9.6
gi|19743827 sodium bicarbonate transporter 4 isoform c [Homo sap... 29 9.6
gi|42794265 MAS-related GPR, member D [Homo sapiens] 29 9.6
>gi|211063479 major facilitator superfamily domain containing 2
isoform 1 [Homo sapiens]
Length = 543
Score = 1085 bits (2806), Expect = 0.0
Identities = 543/543 (100%), Positives = 543/543 (100%)
Query: 1 MAKGEGAESGSAAGLLPTSILQSTERPAQVKKEPKKKKQQLSVCNKLCYALGGAPYQVTG 60
MAKGEGAESGSAAGLLPTSILQSTERPAQVKKEPKKKKQQLSVCNKLCYALGGAPYQVTG
Sbjct: 1 MAKGEGAESGSAAGLLPTSILQSTERPAQVKKEPKKKKQQLSVCNKLCYALGGAPYQVTG 60
Query: 61 CALGFFLQIYLLDVAQKDEEVVFCFSSFQVGPFSASIILFVGRAWDAITDPLVGLCISKS 120
CALGFFLQIYLLDVAQKDEEVVFCFSSFQVGPFSASIILFVGRAWDAITDPLVGLCISKS
Sbjct: 61 CALGFFLQIYLLDVAQKDEEVVFCFSSFQVGPFSASIILFVGRAWDAITDPLVGLCISKS 120
Query: 121 PWTCLGRLMPWIIFSTPLAVIAYFLIWFVPDFPHGQTYWYLLFYCLFETMVTCFHVPYSA 180
PWTCLGRLMPWIIFSTPLAVIAYFLIWFVPDFPHGQTYWYLLFYCLFETMVTCFHVPYSA
Sbjct: 121 PWTCLGRLMPWIIFSTPLAVIAYFLIWFVPDFPHGQTYWYLLFYCLFETMVTCFHVPYSA 180
Query: 181 LTMFISTEQTERDSATAYRMTVEVLGTVLGTAIQGQIVGQADTPCFQDLNSSTVASQSAN 240
LTMFISTEQTERDSATAYRMTVEVLGTVLGTAIQGQIVGQADTPCFQDLNSSTVASQSAN
Sbjct: 181 LTMFISTEQTERDSATAYRMTVEVLGTVLGTAIQGQIVGQADTPCFQDLNSSTVASQSAN 240
Query: 241 HTHGTTSHRETQKAYLLAAGVIVCIYIICAVILILGVREQREPYEAQQSEPIAYFRGLRL 300
HTHGTTSHRETQKAYLLAAGVIVCIYIICAVILILGVREQREPYEAQQSEPIAYFRGLRL
Sbjct: 241 HTHGTTSHRETQKAYLLAAGVIVCIYIICAVILILGVREQREPYEAQQSEPIAYFRGLRL 300
Query: 301 VMSHGPYIKLITGFLFTSLAFMLVEGNFVLFCTYTLGFRNEFQNLLLAIMLSATLTIPIW 360
VMSHGPYIKLITGFLFTSLAFMLVEGNFVLFCTYTLGFRNEFQNLLLAIMLSATLTIPIW
Sbjct: 301 VMSHGPYIKLITGFLFTSLAFMLVEGNFVLFCTYTLGFRNEFQNLLLAIMLSATLTIPIW 360
Query: 361 QWFLTRFGKKTAVYVGISSAVPFLILVALMESNLIITYAVAVAAGISVAAAFLLPWSMLP 420
QWFLTRFGKKTAVYVGISSAVPFLILVALMESNLIITYAVAVAAGISVAAAFLLPWSMLP
Sbjct: 361 QWFLTRFGKKTAVYVGISSAVPFLILVALMESNLIITYAVAVAAGISVAAAFLLPWSMLP 420
Query: 421 DVIDDFHLKQPHFHGTEPIFFSFYVFFTKFASGVSLGISTLSLDFAGYQTRGCSQPERVK 480
DVIDDFHLKQPHFHGTEPIFFSFYVFFTKFASGVSLGISTLSLDFAGYQTRGCSQPERVK
Sbjct: 421 DVIDDFHLKQPHFHGTEPIFFSFYVFFTKFASGVSLGISTLSLDFAGYQTRGCSQPERVK 480
Query: 481 FTLNMLVTMAPIVLILLGLLLFKMYPIDEERRRQNKKALQALRDEASSSGCSETDSTELA 540
FTLNMLVTMAPIVLILLGLLLFKMYPIDEERRRQNKKALQALRDEASSSGCSETDSTELA
Sbjct: 481 FTLNMLVTMAPIVLILLGLLLFKMYPIDEERRRQNKKALQALRDEASSSGCSETDSTELA 540
Query: 541 SIL 543
SIL
Sbjct: 541 SIL 543
>gi|42713696 major facilitator superfamily domain containing 2
isoform 2 [Homo sapiens]
Length = 530
Score = 1049 bits (2713), Expect = 0.0
Identities = 530/543 (97%), Positives = 530/543 (97%), Gaps = 13/543 (2%)
Query: 1 MAKGEGAESGSAAGLLPTSILQSTERPAQVKKEPKKKKQQLSVCNKLCYALGGAPYQVTG 60
MAKGEGAESGSAAGLLPTSILQSTERPAQVKKEPKKKKQQLSVCNKLCYALGGAPYQVTG
Sbjct: 1 MAKGEGAESGSAAGLLPTSILQSTERPAQVKKEPKKKKQQLSVCNKLCYALGGAPYQVTG 60
Query: 61 CALGFFLQIYLLDVAQKDEEVVFCFSSFQVGPFSASIILFVGRAWDAITDPLVGLCISKS 120
CALGFFLQIYLLDVAQ VGPFSASIILFVGRAWDAITDPLVGLCISKS
Sbjct: 61 CALGFFLQIYLLDVAQ-------------VGPFSASIILFVGRAWDAITDPLVGLCISKS 107
Query: 121 PWTCLGRLMPWIIFSTPLAVIAYFLIWFVPDFPHGQTYWYLLFYCLFETMVTCFHVPYSA 180
PWTCLGRLMPWIIFSTPLAVIAYFLIWFVPDFPHGQTYWYLLFYCLFETMVTCFHVPYSA
Sbjct: 108 PWTCLGRLMPWIIFSTPLAVIAYFLIWFVPDFPHGQTYWYLLFYCLFETMVTCFHVPYSA 167
Query: 181 LTMFISTEQTERDSATAYRMTVEVLGTVLGTAIQGQIVGQADTPCFQDLNSSTVASQSAN 240
LTMFISTEQTERDSATAYRMTVEVLGTVLGTAIQGQIVGQADTPCFQDLNSSTVASQSAN
Sbjct: 168 LTMFISTEQTERDSATAYRMTVEVLGTVLGTAIQGQIVGQADTPCFQDLNSSTVASQSAN 227
Query: 241 HTHGTTSHRETQKAYLLAAGVIVCIYIICAVILILGVREQREPYEAQQSEPIAYFRGLRL 300
HTHGTTSHRETQKAYLLAAGVIVCIYIICAVILILGVREQREPYEAQQSEPIAYFRGLRL
Sbjct: 228 HTHGTTSHRETQKAYLLAAGVIVCIYIICAVILILGVREQREPYEAQQSEPIAYFRGLRL 287
Query: 301 VMSHGPYIKLITGFLFTSLAFMLVEGNFVLFCTYTLGFRNEFQNLLLAIMLSATLTIPIW 360
VMSHGPYIKLITGFLFTSLAFMLVEGNFVLFCTYTLGFRNEFQNLLLAIMLSATLTIPIW
Sbjct: 288 VMSHGPYIKLITGFLFTSLAFMLVEGNFVLFCTYTLGFRNEFQNLLLAIMLSATLTIPIW 347
Query: 361 QWFLTRFGKKTAVYVGISSAVPFLILVALMESNLIITYAVAVAAGISVAAAFLLPWSMLP 420
QWFLTRFGKKTAVYVGISSAVPFLILVALMESNLIITYAVAVAAGISVAAAFLLPWSMLP
Sbjct: 348 QWFLTRFGKKTAVYVGISSAVPFLILVALMESNLIITYAVAVAAGISVAAAFLLPWSMLP 407
Query: 421 DVIDDFHLKQPHFHGTEPIFFSFYVFFTKFASGVSLGISTLSLDFAGYQTRGCSQPERVK 480
DVIDDFHLKQPHFHGTEPIFFSFYVFFTKFASGVSLGISTLSLDFAGYQTRGCSQPERVK
Sbjct: 408 DVIDDFHLKQPHFHGTEPIFFSFYVFFTKFASGVSLGISTLSLDFAGYQTRGCSQPERVK 467
Query: 481 FTLNMLVTMAPIVLILLGLLLFKMYPIDEERRRQNKKALQALRDEASSSGCSETDSTELA 540
FTLNMLVTMAPIVLILLGLLLFKMYPIDEERRRQNKKALQALRDEASSSGCSETDSTELA
Sbjct: 468 FTLNMLVTMAPIVLILLGLLLFKMYPIDEERRRQNKKALQALRDEASSSGCSETDSTELA 527
Query: 541 SIL 543
SIL
Sbjct: 528 SIL 530
>gi|122937339 major facilitator superfamily domain-containing
protein 2b [Homo sapiens]
Length = 497
Score = 376 bits (966), Expect = e-104
Identities = 197/464 (42%), Positives = 274/464 (59%), Gaps = 28/464 (6%)
Query: 40 QLSVCNKLCYALGGAPYQVTGCALGFFLQIYLLDVAQKDEEVVFCFSSFQVGPFSASIIL 99
+LS C K+CY +GG P Q+ A F+LQ++LLD+AQ + S++L
Sbjct: 38 RLSFCTKVCYGIGGVPNQIASSATAFYLQLFLLDIAQ-------------IPAAQVSLVL 84
Query: 100 FVGRAWDAITDPLVGLCISKSPWTCLGRLMPWIIFSTPLAVIAYFLIWFVPDFPHGQTYW 159
F G+ A DP+ G I++S T GRLMPW++ TP +AYF +WF+P F + W
Sbjct: 85 FGGKVSGAAADPVAGFFINRSQRTGSGRLMPWVLGCTPFIALAYFFLWFLPPFTSLRGLW 144
Query: 160 YLLFYCLFETMVTCFHVPYSALTMFISTEQTERDSATAYRMTVEVLGTVLGTAIQGQIVG 219
Y FYCLF+ + T F VPY+ALTM ++ ERDSATAYRMTVE+ GT++G + G IV
Sbjct: 145 YTTFYCLFQALATFFQVPYTALTMLLTPCPRERDSATAYRMTVEMAGTLMGATVHGLIVS 204
Query: 220 QADTP--CFQDLNSSTVASQSANHTHGTTSHRETQKAYLLAAGVIVCIYIICAVILILGV 277
A P C V + S N H Y +AA V+V Y +C +L LGV
Sbjct: 205 GAHRPHRCEATATPGPV-TVSPNAAH----------LYCIAAAVVVVTYPVCISLLCLGV 253
Query: 278 REQREPYEAQQSEPIAYFRGLRLVMSHGPYIKLITGFLFTSLAFMLVEGNFVLFCTYTLG 337
+E+ +P +++ GL L H PY+KL+ FLF S A + + VLFCT+
Sbjct: 254 KERPDPSAPASGPGLSFLAGLSLTTRHPPYLKLVISFLFISAAVQVEQSYLVLFCTHASQ 313
Query: 338 FRNEFQNLLLAIMLSATLTIPIWQWFLTRFGKKTAVYVGISSAVPFLILVALMESNLIIT 397
+ Q L+L +++SA L+ P+W+W L RFGKKT+ + GI + VPF IL+A + + +
Sbjct: 314 LHDHVQGLVLTVLVSAVLSTPLWEWVLQRFGKKTSAF-GIFAMVPFAILLAAVPT-APVA 371
Query: 398 YAVAVAAGISVAAAFLLPWSMLPDVIDDFHLKQPHFHGTEPIFFSFYVFFTKFASGVSLG 457
Y VA +G+S+A + LLPWSMLPDV+DDF L+ H G E IF+S YVFFTK + +LG
Sbjct: 372 YVVAFVSGVSIAVSLLLPWSMLPDVVDDFQLQHRHGPGLETIFYSSYVFFTKLSGACALG 431
Query: 458 ISTLSLDFAGYQTRGCSQPERVKFTLNMLVTMAPIVLILLGLLL 501
ISTLSL+F+GY+ C Q E V TL +L+ P +IL GL +
Sbjct: 432 ISTLSLEFSGYKAGVCKQAEEVVVTLKVLIGAVPTCMILAGLCI 475
>gi|111378391 hypothetical protein LOC126321 isoform c [Homo
sapiens]
Length = 480
Score = 48.1 bits (113), Expect = 2e-05
Identities = 93/437 (21%), Positives = 163/437 (37%), Gaps = 54/437 (12%)
Query: 41 LSVCNKLCYALGGAPYQVTGCALGFFLQIYLLDVAQKDEEVVFCFSSFQVGPFSASIILF 100
LS+ +L YA+G + +L +YL V A ++L
Sbjct: 17 LSLVARLSYAVGHFLNDLCASMWFTYLLLYLHSVRAYSSR-------------GAGLLLL 63
Query: 101 VGRAWDAITDPLVGLCISKSPWTCL--GRLMPWIIFSTPLAVIAYFLIWFVPDFPHGQTY 158
+G+ D + PLVG ++ C G W + T ++++ I F P G
Sbjct: 64 LGQVADGLCTPLVGYEADRAASCCARYGPRKAWHLVGTVCVLLSFPFI-FSPCLGCGAAT 122
Query: 159 --WYLLFY-----CLFETMVTCFHVPYSALTMFISTEQTERDSATAYRMTVEVLG--TVL 209
W L Y +F+ + + +L + T E+ TA R V+ TV
Sbjct: 123 PEWAALLYYGPFIVIFQFGWASTQISHLSLIPELVTNDHEKVELTALRYAFTVVANITVY 182
Query: 210 GTA-IQGQIVGQADTPCFQDLNSSTVASQSANHTHGTTSHRETQKAYLLAAGVIVCIYII 268
G A + + G + QD++ S G + LL GV +
Sbjct: 183 GAAWLLLHLQGSSRVEPTQDISISDQL--------GGQDVPVFRNLSLLVVGVGA----V 230
Query: 269 CAVILILGVREQREPYEAQQSEPIAYFRGLR----LVMSHG----PYIKLITGFLFTSLA 320
+++ LG RE+R P+ + E L+ H + ++ ++ T L
Sbjct: 231 FSLLFHLGTRERRRPHAEEPGEHTPLLAPATAQPLLLWKHWLREPAFYQVGILYMTTRLI 290
Query: 321 FMLVEGNFVLFCTYTLGFRNEF-QNLLLAIMLSATLTIPIWQWFLTRFGKKTAVYVGISS 379
L + ++ TY+L +F + L + LS L+ + + G+ + G+
Sbjct: 291 VNLSQTYMAMYLTYSLHLPKKFIATIPLVMYLSGFLSSFLMKPINKCIGRNMTYFSGLLV 350
Query: 380 AVPFLILVALMESNLIITYAVAVAAGISVAAAFLLPWSMLPDVIDDFHLKQPHFHGTEPI 439
+ F VAL E + YA AV G A + +M D+I PH + +
Sbjct: 351 ILAFAAWVALAEGLGVAVYAAAVLLGAGCATILVTSLAMTADLIG------PHTNSGAFV 404
Query: 440 FFSFYVFFTKFASGVSL 456
+ S F K A+G+++
Sbjct: 405 YGSM-SFLDKVANGLAV 420
>gi|111378395 hypothetical protein LOC126321 isoform b [Homo
sapiens]
Length = 473
Score = 48.1 bits (113), Expect = 2e-05
Identities = 93/437 (21%), Positives = 163/437 (37%), Gaps = 54/437 (12%)
Query: 41 LSVCNKLCYALGGAPYQVTGCALGFFLQIYLLDVAQKDEEVVFCFSSFQVGPFSASIILF 100
LS+ +L YA+G + +L +YL V A ++L
Sbjct: 17 LSLVARLSYAVGHFLNDLCASMWFTYLLLYLHSVRAYSSR-------------GAGLLLL 63
Query: 101 VGRAWDAITDPLVGLCISKSPWTCL--GRLMPWIIFSTPLAVIAYFLIWFVPDFPHGQTY 158
+G+ D + PLVG ++ C G W + T ++++ I F P G
Sbjct: 64 LGQVADGLCTPLVGYEADRAASCCARYGPRKAWHLVGTVCVLLSFPFI-FSPCLGCGAAT 122
Query: 159 --WYLLFY-----CLFETMVTCFHVPYSALTMFISTEQTERDSATAYRMTVEVLG--TVL 209
W L Y +F+ + + +L + T E+ TA R V+ TV
Sbjct: 123 PEWAALLYYGPFIVIFQFGWASTQISHLSLIPELVTNDHEKVELTALRYAFTVVANITVY 182
Query: 210 GTA-IQGQIVGQADTPCFQDLNSSTVASQSANHTHGTTSHRETQKAYLLAAGVIVCIYII 268
G A + + G + QD++ S G + LL GV +
Sbjct: 183 GAAWLLLHLQGSSRVEPTQDISISDQL--------GGQDVPVFRNLSLLVVGVGA----V 230
Query: 269 CAVILILGVREQREPYEAQQSEPIAYFRGLR----LVMSHG----PYIKLITGFLFTSLA 320
+++ LG RE+R P+ + E L+ H + ++ ++ T L
Sbjct: 231 FSLLFHLGTRERRRPHAEEPGEHTPLLAPATAQPLLLWKHWLREPAFYQVGILYMTTRLI 290
Query: 321 FMLVEGNFVLFCTYTLGFRNEF-QNLLLAIMLSATLTIPIWQWFLTRFGKKTAVYVGISS 379
L + ++ TY+L +F + L + LS L+ + + G+ + G+
Sbjct: 291 VNLSQTYMAMYLTYSLHLPKKFIATIPLVMYLSGFLSSFLMKPINKCIGRNMTYFSGLLV 350
Query: 380 AVPFLILVALMESNLIITYAVAVAAGISVAAAFLLPWSMLPDVIDDFHLKQPHFHGTEPI 439
+ F VAL E + YA AV G A + +M D+I PH + +
Sbjct: 351 ILAFAAWVALAEGLGVAVYAAAVLLGAGCATILVTSLAMTADLIG------PHTNSGAFV 404
Query: 440 FFSFYVFFTKFASGVSL 456
+ S F K A+G+++
Sbjct: 405 YGSM-SFLDKVANGLAV 420
>gi|111378386 hypothetical protein LOC126321 isoform a [Homo
sapiens]
Length = 538
Score = 48.1 bits (113), Expect = 2e-05
Identities = 93/437 (21%), Positives = 163/437 (37%), Gaps = 54/437 (12%)
Query: 41 LSVCNKLCYALGGAPYQVTGCALGFFLQIYLLDVAQKDEEVVFCFSSFQVGPFSASIILF 100
LS+ +L YA+G + +L +YL V A ++L
Sbjct: 17 LSLVARLSYAVGHFLNDLCASMWFTYLLLYLHSVRAYSSR-------------GAGLLLL 63
Query: 101 VGRAWDAITDPLVGLCISKSPWTCL--GRLMPWIIFSTPLAVIAYFLIWFVPDFPHGQTY 158
+G+ D + PLVG ++ C G W + T ++++ I F P G
Sbjct: 64 LGQVADGLCTPLVGYEADRAASCCARYGPRKAWHLVGTVCVLLSFPFI-FSPCLGCGAAT 122
Query: 159 --WYLLFY-----CLFETMVTCFHVPYSALTMFISTEQTERDSATAYRMTVEVLG--TVL 209
W L Y +F+ + + +L + T E+ TA R V+ TV
Sbjct: 123 PEWAALLYYGPFIVIFQFGWASTQISHLSLIPELVTNDHEKVELTALRYAFTVVANITVY 182
Query: 210 GTA-IQGQIVGQADTPCFQDLNSSTVASQSANHTHGTTSHRETQKAYLLAAGVIVCIYII 268
G A + + G + QD++ S G + LL GV +
Sbjct: 183 GAAWLLLHLQGSSRVEPTQDISISDQL--------GGQDVPVFRNLSLLVVGVGA----V 230
Query: 269 CAVILILGVREQREPYEAQQSEPIAYFRGLR----LVMSHG----PYIKLITGFLFTSLA 320
+++ LG RE+R P+ + E L+ H + ++ ++ T L
Sbjct: 231 FSLLFHLGTRERRRPHAEEPGEHTPLLAPATAQPLLLWKHWLREPAFYQVGILYMTTRLI 290
Query: 321 FMLVEGNFVLFCTYTLGFRNEF-QNLLLAIMLSATLTIPIWQWFLTRFGKKTAVYVGISS 379
L + ++ TY+L +F + L + LS L+ + + G+ + G+
Sbjct: 291 VNLSQTYMAMYLTYSLHLPKKFIATIPLVMYLSGFLSSFLMKPINKCIGRNMTYFSGLLV 350
Query: 380 AVPFLILVALMESNLIITYAVAVAAGISVAAAFLLPWSMLPDVIDDFHLKQPHFHGTEPI 439
+ F VAL E + YA AV G A + +M D+I PH + +
Sbjct: 351 ILAFAAWVALAEGLGVAVYAAAVLLGAGCATILVTSLAMTADLIG------PHTNSGAFV 404
Query: 440 FFSFYVFFTKFASGVSL 456
+ S F K A+G+++
Sbjct: 405 YGSM-SFLDKVANGLAV 420
>gi|161377472 cyclin A1 isoform c [Homo sapiens]
Length = 421
Score = 31.2 bits (69), Expect = 2.5
Identities = 23/82 (28%), Positives = 44/82 (53%), Gaps = 5/82 (6%)
Query: 333 TYTLGFRNEFQNLLLAIMLSATLTIPIWQWFLTRFGKKTAVYVGISSAVPFLILVALMES 392
TYT + ++LLL + L+ LT+P FL ++ ++ V V + ++ ++L+E+
Sbjct: 274 TYTKRQLLKMEHLLLKV-LAFDLTVPTTNQFLLQYLRRQGVCVRTENLAKYVAELSLLEA 332
Query: 393 NLIITYAVAVAAGISVAAAFLL 414
+ + Y ++ A AAAF L
Sbjct: 333 DPFLKYLPSLIA----AAAFCL 350
>gi|161377470 cyclin A1 isoform c [Homo sapiens]
Length = 421
Score = 31.2 bits (69), Expect = 2.5
Identities = 23/82 (28%), Positives = 44/82 (53%), Gaps = 5/82 (6%)
Query: 333 TYTLGFRNEFQNLLLAIMLSATLTIPIWQWFLTRFGKKTAVYVGISSAVPFLILVALMES 392
TYT + ++LLL + L+ LT+P FL ++ ++ V V + ++ ++L+E+
Sbjct: 274 TYTKRQLLKMEHLLLKV-LAFDLTVPTTNQFLLQYLRRQGVCVRTENLAKYVAELSLLEA 332
Query: 393 NLIITYAVAVAAGISVAAAFLL 414
+ + Y ++ A AAAF L
Sbjct: 333 DPFLKYLPSLIA----AAAFCL 350
>gi|161377468 cyclin A1 isoform b [Homo sapiens]
Length = 464
Score = 31.2 bits (69), Expect = 2.5
Identities = 23/82 (28%), Positives = 44/82 (53%), Gaps = 5/82 (6%)
Query: 333 TYTLGFRNEFQNLLLAIMLSATLTIPIWQWFLTRFGKKTAVYVGISSAVPFLILVALMES 392
TYT + ++LLL + L+ LT+P FL ++ ++ V V + ++ ++L+E+
Sbjct: 317 TYTKRQLLKMEHLLLKV-LAFDLTVPTTNQFLLQYLRRQGVCVRTENLAKYVAELSLLEA 375
Query: 393 NLIITYAVAVAAGISVAAAFLL 414
+ + Y ++ A AAAF L
Sbjct: 376 DPFLKYLPSLIA----AAAFCL 393
>gi|4502611 cyclin A1 isoform a [Homo sapiens]
Length = 465
Score = 31.2 bits (69), Expect = 2.5
Identities = 23/82 (28%), Positives = 44/82 (53%), Gaps = 5/82 (6%)
Query: 333 TYTLGFRNEFQNLLLAIMLSATLTIPIWQWFLTRFGKKTAVYVGISSAVPFLILVALMES 392
TYT + ++LLL + L+ LT+P FL ++ ++ V V + ++ ++L+E+
Sbjct: 318 TYTKRQLLKMEHLLLKV-LAFDLTVPTTNQFLLQYLRRQGVCVRTENLAKYVAELSLLEA 376
Query: 393 NLIITYAVAVAAGISVAAAFLL 414
+ + Y ++ A AAAF L
Sbjct: 377 DPFLKYLPSLIA----AAAFCL 394
>gi|67782317 solute carrier family 6 member 9 isoform 3 [Homo
sapiens]
Length = 633
Score = 30.4 bits (67), Expect = 4.3
Identities = 38/167 (22%), Positives = 65/167 (38%), Gaps = 19/167 (11%)
Query: 256 LLAAGVIVCIY--IICAVILILGVRE--QREPYEAQQSEPIAYFRGLRLVMSHGPYIKLI 311
LL G C+ ++ A++ +G Q++ Y + G+ L G Y L+
Sbjct: 394 LLGLGTQFCLLETLVTAIVDEVGNEWILQKKTYVTLGVAVAGFLLGIPLTSQAGIYWLLL 453
Query: 312 TGFLFTSLAFMLVEGNFVLFCTYTLGFRNEFQNLLLAIMLSATLTIPI-WQWFLTRFGKK 370
S + +++ + Y G RN FQ++ + + L I W++
Sbjct: 454 MDNYAASFSLVVISCIMCVAIMYIYGHRNYFQDIQMMLGFPPPLFFQICWRF-------- 505
Query: 371 TAVYVGISSAVPFLILVALMESNLIITYAVAVAAGISVAAAFLLPWS 417
+S A+ F ILV + ITY G +VA FL+ S
Sbjct: 506 ------VSPAIIFFILVFTVIQYQPITYNHYQYPGWAVAIGFLMALS 546
>gi|67782315 solute carrier family 6 member 9 isoform 2 [Homo
sapiens]
Length = 706
Score = 30.4 bits (67), Expect = 4.3
Identities = 38/167 (22%), Positives = 65/167 (38%), Gaps = 19/167 (11%)
Query: 256 LLAAGVIVCIY--IICAVILILGVRE--QREPYEAQQSEPIAYFRGLRLVMSHGPYIKLI 311
LL G C+ ++ A++ +G Q++ Y + G+ L G Y L+
Sbjct: 467 LLGLGTQFCLLETLVTAIVDEVGNEWILQKKTYVTLGVAVAGFLLGIPLTSQAGIYWLLL 526
Query: 312 TGFLFTSLAFMLVEGNFVLFCTYTLGFRNEFQNLLLAIMLSATLTIPI-WQWFLTRFGKK 370
S + +++ + Y G RN FQ++ + + L I W++
Sbjct: 527 MDNYAASFSLVVISCIMCVAIMYIYGHRNYFQDIQMMLGFPPPLFFQICWRF-------- 578
Query: 371 TAVYVGISSAVPFLILVALMESNLIITYAVAVAAGISVAAAFLLPWS 417
+S A+ F ILV + ITY G +VA FL+ S
Sbjct: 579 ------VSPAIIFFILVFTVIQYQPITYNHYQYPGWAVAIGFLMALS 619
>gi|67782313 solute carrier family 6 member 9 isoform 1 [Homo
sapiens]
Length = 652
Score = 30.4 bits (67), Expect = 4.3
Identities = 38/167 (22%), Positives = 65/167 (38%), Gaps = 19/167 (11%)
Query: 256 LLAAGVIVCIY--IICAVILILGVRE--QREPYEAQQSEPIAYFRGLRLVMSHGPYIKLI 311
LL G C+ ++ A++ +G Q++ Y + G+ L G Y L+
Sbjct: 413 LLGLGTQFCLLETLVTAIVDEVGNEWILQKKTYVTLGVAVAGFLLGIPLTSQAGIYWLLL 472
Query: 312 TGFLFTSLAFMLVEGNFVLFCTYTLGFRNEFQNLLLAIMLSATLTIPI-WQWFLTRFGKK 370
S + +++ + Y G RN FQ++ + + L I W++
Sbjct: 473 MDNYAASFSLVVISCIMCVAIMYIYGHRNYFQDIQMMLGFPPPLFFQICWRF-------- 524
Query: 371 TAVYVGISSAVPFLILVALMESNLIITYAVAVAAGISVAAAFLLPWS 417
+S A+ F ILV + ITY G +VA FL+ S
Sbjct: 525 ------VSPAIIFFILVFTVIQYQPITYNHYQYPGWAVAIGFLMALS 565
>gi|8923532 CLN6 protein [Homo sapiens]
Length = 311
Score = 30.0 bits (66), Expect = 5.6
Identities = 22/89 (24%), Positives = 39/89 (43%), Gaps = 18/89 (20%)
Query: 128 LMPWII-FSTPLAVIAYFLIWFVPDFPHGQTYWYLLFYCLFETMVTCFHVPYSALTMFIS 186
L W++ F P+A++ + L WF + P Y FH+ Y+ +T F+
Sbjct: 53 LQNWVLDFGRPIAMLVFPLEWFPLNKPSVGDY---------------FHMAYNVITPFLL 97
Query: 187 TEQTERDSATAYRMT--VEVLGTVLGTAI 213
+ ER T R V ++ ++G +I
Sbjct: 98 LKLIERSPRTLPRSITYVSIIIFIMGASI 126
>gi|13376097 NIPA-like domain containing 2 [Homo sapiens]
Length = 368
Score = 30.0 bits (66), Expect = 5.6
Identities = 49/219 (22%), Positives = 89/219 (40%), Gaps = 31/219 (14%)
Query: 260 GVIVCIYIICAVILILGVREQREPYEAQQSEPIAYFRGLR-----LVMSHGPYIKLIT-G 313
GV++ I + + L +++ AQQ P YF+ + L+M+ G G
Sbjct: 50 GVLLAILGNLVISISLNIQKYSHLQLAQQEHPRPYFKSVLWWGGVLLMAVGETGNFAAYG 109
Query: 314 F----LFTSLAFMLVEGNFVLFCTY-------------TLGFRNEFQNLLLAIMLSATLT 356
F L L + V G+ ++ T+ TL F + + A ++ ++
Sbjct: 110 FAPITLIAPLGCVSVTGSAIISVTFLKDNLRASDLLGTTLAFAGTYLLVNFAPNITQAIS 169
Query: 357 IPIWQWFLTRFGKKTAVYVGISSAVPFLILVAL-----MESNLIITYAVAVAAGISVAAA 411
Q++L G + +YV I + F IL+ M+ +I+ VA+ A ++V +
Sbjct: 170 ARTVQYYLV--GWQFLIYV-ILEILIFCILLYFYKRKGMKHMVILLTLVAILASLTVISV 226
Query: 412 FLLPWSMLPDVIDDFHLKQPHFHGTEPIFFSFYVFFTKF 450
+ + V+D L P F+ I + VF KF
Sbjct: 227 KAVSGMITFSVMDKMQLTYPIFYIMFIIMIASCVFQVKF 265
>gi|125987596 sodium bicarbonate transporter 4 isoform a [Homo
sapiens]
Length = 1137
Score = 29.3 bits (64), Expect = 9.6
Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 7/85 (8%)
Query: 349 IMLSATLTIPIWQWFLTRFGKKTAV-------YVGISSAVPFLILVALMESNLIITYAVA 401
I+LS+T I I++ L F K + ++G+ SAV LILVA S +I
Sbjct: 576 IILSSTGPILIFEKLLFDFSKGNGLDYMEFRLWIGLHSAVQCLILVATDASFIIKYITRF 635
Query: 402 VAAGISVAAAFLLPWSMLPDVIDDF 426
G S +F+ + + +I F
Sbjct: 636 TEEGFSTLISFIFIYDAIKKMIGAF 660
>gi|19743827 sodium bicarbonate transporter 4 isoform c [Homo
sapiens]
Length = 1121
Score = 29.3 bits (64), Expect = 9.6
Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 7/85 (8%)
Query: 349 IMLSATLTIPIWQWFLTRFGKKTAV-------YVGISSAVPFLILVALMESNLIITYAVA 401
I+LS+T I I++ L F K + ++G+ SAV LILVA S +I
Sbjct: 576 IILSSTGPILIFEKLLFDFSKGNGLDYMEFRLWIGLHSAVQCLILVATDASFIIKYITRF 635
Query: 402 VAAGISVAAAFLLPWSMLPDVIDDF 426
G S +F+ + + +I F
Sbjct: 636 TEEGFSTLISFIFIYDAIKKMIGAF 660
>gi|42794265 MAS-related GPR, member D [Homo sapiens]
Length = 321
Score = 29.3 bits (64), Expect = 9.6
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 5/61 (8%)
Query: 227 QDLNSSTVASQSANHTHGTTSHRETQKAYLLAAGVIVCIYIICA---VILILGVREQREP 283
Q LNSS + N++ G+T H T L + + C+ + VI +LG R R P
Sbjct: 3 QTLNSSGTVESALNYSRGSTVH--TAYLVLSSLAMFTCLCGMAGNSMVIWLLGFRMHRNP 60
Query: 284 Y 284
+
Sbjct: 61 F 61
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.326 0.139 0.424
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,504,397
Number of Sequences: 37866
Number of extensions: 755669
Number of successful extensions: 2850
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 2836
Number of HSP's gapped (non-prelim): 21
length of query: 543
length of database: 18,247,518
effective HSP length: 107
effective length of query: 436
effective length of database: 14,195,856
effective search space: 6189393216
effective search space used: 6189393216
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.