Guide to the Human Genome
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Name: MFSD2 Sequence: fasta or formatted (530aa) NCBI GI: 42713696
Description:

major facilitator superfamily domain containing 2 isoform 2

Referenced in:

Solute Carrier Families

Other entries for this name:
alt prot [543aa] major facilitator superfamily domain containing 2 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.9         47           3
 C cysteine            2.5         13           1
 D aspartate           2.6         14           2
 E glutamate           4.3         23           2
 F phenylalanine       6.8         36           2
 G glycine             6.6         35           2
 H histidine           1.7          9           1
 I isoleucine          7.0         37           2
 K lysine              3.6         19           4
 L leucine            12.3         65           3
 M methionine          2.5         13           1
 N asparagine          1.7          9           1
 P proline             4.7         25           1
 Q glutamine           4.7         25           2
 R arginine            3.4         18           3
 S serine              7.4         39           3
 T threonine           7.4         39           2
 V valine              6.8         36           1
 W tryptophan          1.5          8           1
 Y tyrosine            3.8         20           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   major facilitator superfamily domain containing 2 is... 
MFSD2                 0.991   major facilitator superfamily domain containing 2 i...
MFSD2B                0.348   major facilitator superfamily domain-containing pro...
C19orf28              0.030   hypothetical protein LOC126321 isoform c 
C19orf28              0.030   hypothetical protein LOC126321 isoform b 
C19orf28              0.030   hypothetical protein LOC126321 isoform a 
CCNA1                 0.006   cyclin A1 isoform c 
CCNA1                 0.006   cyclin A1 isoform c 
CCNA1                 0.006   cyclin A1 isoform b 
CCNA1                 0.006   cyclin A1 isoform a 
SLC6A9                0.005   solute carrier family 6 member 9 isoform 3 
SLC6A9                0.005   solute carrier family 6 member 9 isoform 2 
SLC6A9                0.005   solute carrier family 6 member 9 isoform 1 
CLN6                  0.005   CLN6 protein 
NIPAL2                0.005   NIPA-like domain containing 2 
SLC4A5                0.004   sodium bicarbonate transporter 4 isoform a 
SLC4A5                0.004   sodium bicarbonate transporter 4 isoform c 
MRGPRD                0.004   MAS-related GPR, member D 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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