Guide to the Human Genome
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Name: MFSD2B Sequence: fasta or formatted (497aa) NCBI GI: 122937339
Description:

major facilitator superfamily domain-containing protein 2b

Referenced in:

Solute Carrier Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.7         58           3
 C cysteine            2.8         14           1
 D aspartate           2.0         10           2
 E glutamate           2.6         13           2
 F phenylalanine       5.8         29           2
 G glycine             7.6         38           2
 H histidine           2.2         11           1
 I isoleucine          3.8         19           1
 K lysine              2.6         13           2
 L leucine            12.1         60           3
 M methionine          2.0         10           1
 N asparagine          0.6          3           1
 P proline             8.0         40           2
 Q glutamine           3.2         16           1
 R arginine            4.2         21           2
 S serine              8.2         41           2
 T threonine           6.6         33           2
 V valine              9.5         47           4
 W tryptophan          1.2          6           1
 Y tyrosine            3.0         15           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   major facilitator superfamily domain-containing pro... 
MFSD2                 0.371   major facilitator superfamily domain containing 2 is...
MFSD2                 0.361   major facilitator superfamily domain containing 2 i...
C19orf28              0.046   hypothetical protein LOC126321 isoform c 
C19orf28              0.046   hypothetical protein LOC126321 isoform b 
C19orf28              0.046   hypothetical protein LOC126321 isoform a 
SLC2A12               0.011   solute carrier family 2 (facilitated glucose transpo...
UTF1                  0.010   undifferentiated embryonic cell transcription factor...
LOC100291176          0.010   PREDICTED: hypothetical protein XP_002346954 
HCN2                  0.009   hyperpolarization activated cyclic nucleotide-gated...
DBP                   0.009   D site of albumin promoter (albumin D-box) binding p...
BOD1L                 0.008   biorientation of chromosomes in cell division 1-like...
USP51                 0.008   ubiquitin specific protease 51 
ZNF469                0.007   zinc finger protein 469 
DLGAP3                0.007   discs, large (Drosophila) homolog-associated protei...
H1FOO                 0.007   H1 histone family, member O, oocyte-specific 
CDKN1C                0.007   cyclin-dependent kinase inhibitor 1C isoform b [Hom...
CDKN1C                0.007   cyclin-dependent kinase inhibitor 1C isoform b [Hom...
CDKN1C                0.007   cyclin-dependent kinase inhibitor 1C isoform a 
NCOR2                 0.007   nuclear receptor co-repressor 2 isoform 2 
NCOR2                 0.007   nuclear receptor co-repressor 2 isoform 1 
ANKRD43               0.007   ankyrin repeat domain 43 
SPRED3                0.007   sprouty-related, EVH1 domain containing 3 isoform a...
CIC                   0.007   capicua homolog 
VAX1                  0.007   ventral anterior homeobox 1 isoform a 
GPRIN1                0.007   G protein-regulated inducer of neurite outgrowth 1 ...
WAS                   0.006   Wiskott-Aldrich syndrome protein 
LOC100287322          0.006   PREDICTED: hypothetical protein XP_002342818 
FOXD1                 0.006   forkhead box D1 
NHS                   0.006   Nance-Horan syndrome protein isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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