SPTAN1 5662

Name: SPTAN1	Sequence: fasta or formatted (2472aa)		NCBI GI: 154759259
Description: spectrin, alpha, non-erythrocytic 1 (alpha-fodrin) isoform 2		Referenced in: Spectrin and Plectin Families
Other entries for this name: alt prot [2477aa] spectrin, alpha, non-erythrocytic 1 (alpha-fodrin) isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.1 249 3 C cysteine 0.6 14 1 D aspartate 7.2 178 2 E glutamate 11.4 282 4 F phenylalanine 3.4 85 2 G glycine 3.8 95 1 H histidine 2.9 71 2 I isoleucine 3.6 90 2 K lysine 8.0 198 3 L leucine 10.9 269 3 M methionine 2.0 50 2 N asparagine 3.9 96 2 P proline 1.1 28 1 Q glutamine 7.8 192 4 R arginine 6.0 149 3 S serine 6.1 150 2 T threonine 3.6 89 2 V valine 4.3 106 2 W tryptophan 1.6 40 2 Y tyrosine 1.7 41 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 spectrin, alpha, non-erythrocytic 1 (alpha-fodrin) ... SPTAN1 0.999 spectrin, alpha, non-erythrocytic 1 (alpha-fodrin) ... SPTA1 0.552 spectrin, alpha, erythrocytic 1 SPTBN5 0.128 spectrin, beta, non-erythrocytic 5 SPTBN1 0.121 spectrin, beta, non-erythrocytic 1 isoform 2 SPTBN1 0.121 spectrin, beta, non-erythrocytic 1 isoform 1 SPTB 0.114 spectrin beta isoform a SPTB 0.114 spectrin beta isoform b SPTBN2 0.112 spectrin, beta, non-erythrocytic 2 SPTBN4 0.084 spectrin, beta, non-erythrocytic 4 isoform sigma1 [... ACTN4 0.055 actinin, alpha 4 ACTN1 0.054 actinin, alpha 1 isoform b DST 0.054 dystonin isoform 4 DST 0.054 dystonin isoform 3 DST 0.054 dystonin isoform 2 DST 0.054 dystonin isoform 1 DST 0.054 dystonin isoform 1eA precursor ACTN2 0.053 actinin, alpha 2 ACTN1 0.053 actinin, alpha 1 isoform a ACTN1 0.052 actinin, alpha 1 isoform c MACF1 0.049 microfilament and actin filament cross-linker protei... MACF1 0.049 microfilament and actin filament cross-linker protei... ACTN3 0.049 actinin, alpha 3 SPTBN4 0.037 spectrin, beta, non-erythrocytic 4 isoform sigma5 [... DMD 0.036 dystrophin Dp427c isoform DMD 0.036 dystrophin Dp427p2 isoform DMD 0.036 dystrophin Dp427p1 isoform DMD 0.036 dystrophin Dp427l isoform DMD 0.036 dystrophin Dp427m isoform SYNE1 0.030 spectrin repeat containing, nuclear envelope 1 isof... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.