THRA 11838

Name: THRA	Sequence: fasta or formatted (490aa)		NCBI GI: 20127452
Description: thyroid hormone receptor, alpha isoform 2		Referenced in: Organs and Hormones Nuclear Receptors Retroviral Oncogene Homologs Thyroid and Thyroid Hormone Receptor
Other entries for this name: alt prot [410aa] thyroid hormone receptor, alpha isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.1 30 3 C cysteine 3.9 19 2 D aspartate 5.9 29 2 E glutamate 8.4 41 3 F phenylalanine 2.4 12 2 G glycine 6.7 33 2 H histidine 2.9 14 1 I isoleucine 4.7 23 2 K lysine 7.1 35 2 L leucine 9.6 47 2 M methionine 2.7 13 1 N asparagine 2.2 11 1 P proline 5.3 26 1 Q glutamine 5.9 29 2 R arginine 6.3 31 3 S serine 8.4 41 3 T threonine 3.3 16 1 V valine 5.5 27 2 W tryptophan 0.6 3 1 Y tyrosine 2.0 10 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 thyroid hormone receptor, alpha isoform 2 THRA 0.757 thyroid hormone receptor, alpha isoform 1 THRB 0.568 thyroid hormone receptor, beta THRB 0.568 thyroid hormone receptor, beta THRB 0.568 thyroid hormone receptor, beta RARB 0.206 retinoic acid receptor, beta isoform 1 RARA 0.204 retinoic acid receptor, alpha isoform 1 RARA 0.204 retinoic acid receptor, alpha isoform 2 RARA 0.204 retinoic acid receptor, alpha isoform 1 RARG 0.200 retinoic acid receptor, gamma isoform 2 RARG 0.200 retinoic acid receptor, gamma isoform 1 NR1H3 0.161 nuclear receptor subfamily 1, group H, member 3 iso... NR1H3 0.161 nuclear receptor subfamily 1, group H, member 3 iso... RARB 0.156 retinoic acid receptor, beta isoform 2 NR1H4 0.145 nuclear receptor subfamily 1, group H, member 4 [Homo... RXRA 0.136 retinoid X receptor, alpha NR1I3 0.135 constitutive androstane receptor isoform 3 NR1I3 0.131 constitutive androstane receptor isoform 2 NR1I3 0.130 constitutive androstane receptor isoform 6 NR1I3 0.130 constitutive androstane receptor isoform 7 NR4A2 0.127 nuclear receptor subfamily 4, group A, member 2 [Homo... NR1I3 0.127 constitutive androstane receptor isoform 1 RXRB 0.123 retinoid X receptor, beta NR1I2 0.120 nuclear receptor subfamily 1, group I, member 2 isof... VDR 0.117 vitamin D (1,25-dihydroxyvitamin D3) receptor VDR 0.117 vitamin D (1,25-dihydroxyvitamin D3) receptor NR4A3 0.117 nuclear receptor subfamily 4, group A, member 3 isof... NR4A3 0.117 nuclear receptor subfamily 4, group A, member 3 isof... NR4A3 0.117 nuclear receptor subfamily 4, group A, member 3 isof... RARA 0.115 retinoic acid receptor, alpha isoform 4 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.