VDR 34380

Name: VDR	Sequence: fasta or formatted (427aa)		NCBI GI: 63054845
Description: vitamin D (1,25-dihydroxyvitamin D3) receptor		Referenced in: Nuclear Receptors
Other entries for this name: alt mRNA [427aa] vitamin D (1,25-dihydroxyvitamin D3) receptor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.7 20 2 C cysteine 4.0 17 1 D aspartate 7.5 32 2 E glutamate 6.6 28 3 F phenylalanine 4.2 18 2 G glycine 4.7 20 3 H histidine 3.3 14 2 I isoleucine 5.6 24 2 K lysine 5.6 24 2 L leucine 9.8 42 2 M methionine 4.0 17 2 N asparagine 3.0 13 1 P proline 5.2 22 3 Q glutamine 3.7 16 2 R arginine 6.8 29 2 S serine 10.5 45 4 T threonine 4.2 18 1 V valine 4.4 19 1 W tryptophan 0.2 1 1 Y tyrosine 1.9 8 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 vitamin D (1,25-dihydroxyvitamin D3) receptor VDR 1.000 vitamin D (1,25-dihydroxyvitamin D3) receptor NR1I2 0.326 nuclear receptor subfamily 1, group I, member 2 isof... NR1I2 0.326 nuclear receptor subfamily 1, group I, member 2 isof... NR1I2 0.313 nuclear receptor subfamily 1, group I, member 2 isof... NR1H3 0.218 nuclear receptor subfamily 1, group H, member 3 iso... NR1H3 0.218 nuclear receptor subfamily 1, group H, member 3 iso... NR1H2 0.204 nuclear receptor subfamily 1, group H, member 2 [Hom... NR1H4 0.172 nuclear receptor subfamily 1, group H, member 4 [Homo... THRB 0.160 thyroid hormone receptor, beta THRB 0.160 thyroid hormone receptor, beta THRB 0.160 thyroid hormone receptor, beta THRA 0.155 thyroid hormone receptor, alpha isoform 1 RARG 0.155 retinoic acid receptor, gamma isoform 2 RARG 0.155 retinoic acid receptor, gamma isoform 1 RARA 0.148 retinoic acid receptor, alpha isoform 1 RARA 0.148 retinoic acid receptor, alpha isoform 2 RARA 0.148 retinoic acid receptor, alpha isoform 1 THRA 0.135 thyroid hormone receptor, alpha isoform 2 NR1I3 0.135 constitutive androstane receptor isoform 1 NR1I3 0.135 constitutive androstane receptor isoform 4 NR1I3 0.135 constitutive androstane receptor isoform 2 NR1I3 0.135 constitutive androstane receptor isoform 7 NR1I3 0.135 constitutive androstane receptor isoform 8 NR1I3 0.135 constitutive androstane receptor isoform 5 NR1I3 0.135 constitutive androstane receptor isoform 6 NR1I3 0.135 constitutive androstane receptor isoform 3 PPARA 0.132 peroxisome proliferative activated receptor, alpha [... PPARA 0.132 peroxisome proliferative activated receptor, alpha [H... NR1I3 0.125 constitutive androstane receptor isoform 10 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.