Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: NR4A2 Sequence: fasta or formatted (598aa) NCBI GI: 5453822
Description:

nuclear receptor subfamily 4, group A, member 2

Referenced in:

Nuclear Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.8         29           2
 C cysteine            3.0         18           1
 D aspartate           4.7         28           2
 E glutamate           4.2         25           2
 F phenylalanine       4.8         29           2
 G glycine             6.2         37           2
 H histidine           3.2         19           2
 I isoleucine          3.5         21           2
 K lysine              4.8         29           1
 L leucine             8.7         52           2
 M methionine          3.0         18           2
 N asparagine          4.3         26           2
 P proline             9.2         55           3
 Q glutamine           6.2         37           2
 R arginine            4.7         28           3
 S serine              9.9         59           2
 T threonine           4.7         28           2
 V valine              6.2         37           2
 W tryptophan          0.5          3           1
 Y tyrosine            3.3         20           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   nuclear receptor subfamily 4, group A, member 2 [Homo... 
NR4A3                 0.516   nuclear receptor subfamily 4, group A, member 3 isof...
NR4A3                 0.516   nuclear receptor subfamily 4, group A, member 3 isof...
NR4A3                 0.516   nuclear receptor subfamily 4, group A, member 3 isof...
NR4A1                 0.481   nuclear receptor subfamily 4, group A, member 1 [Hom...
NR4A1                 0.481   nuclear receptor subfamily 4, group A, member 1 [Hom...
NR4A3                 0.288   nuclear receptor subfamily 4, group A, member 3 isof...
RARB                  0.143   retinoic acid receptor, beta isoform 1 
RARG                  0.142   retinoic acid receptor, gamma isoform 1 
RARA                  0.141   retinoic acid receptor, alpha isoform 2 
RARA                  0.141   retinoic acid receptor, alpha isoform 1 
RARA                  0.141   retinoic acid receptor, alpha isoform 1 
RARG                  0.141   retinoic acid receptor, gamma isoform 2 
RXRA                  0.134   retinoid X receptor, alpha 
ESRRG                 0.133   estrogen-related receptor gamma isoform 2 
ESRRG                 0.133   estrogen-related receptor gamma isoform 2 
ESRRG                 0.133   estrogen-related receptor gamma isoform 1 
ESRRG                 0.133   estrogen-related receptor gamma isoform 2 
ESRRB                 0.130   estrogen-related receptor beta 
RXRB                  0.128   retinoid X receptor, beta 
RXRG                  0.125   retinoid X receptor, gamma isoform a 
NR2F1                 0.123   nuclear receptor subfamily 2, group F, member 1 [Homo...
NR2F2                 0.121   nuclear receptor subfamily 2, group F, member 2 isof...
ESRRA                 0.120   estrogen-related receptor alpha 
NR2F6                 0.113   nuclear receptor subfamily 2, group F, member 6 [Hom...
THRA                  0.109   thyroid hormone receptor, alpha isoform 1 
ESR1                  0.107   estrogen receptor alpha isoform 4 
ESR1                  0.107   estrogen receptor alpha isoform 3 
ESR1                  0.107   estrogen receptor alpha isoform 2 
ESR1                  0.107   estrogen receptor alpha isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press