Search of human proteins with 195963433

Search of human proteins with 195963433

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|195963433 syncytin precursor [Homo sapiens]
         (538 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|195963433 syncytin precursor [Homo sapiens]                       1110   0.0  
gi|48949851 syncytin precursor [Homo sapiens]                        1110   0.0  
gi|46485773 syncytin 2 [Homo sapiens]                                 187   2e-47
gi|239753837 PREDICTED: similar to Uncharacterized protein LP905...    56   7e-08
gi|239748400 PREDICTED: hypothetical protein XP_002346661 [Homo ...    56   7e-08
gi|239742330 PREDICTED: hypothetical protein XP_002342492 [Homo ...    56   7e-08
gi|145651814 endogenous retroviral sequence 3 [Homo sapiens]           48   2e-05
gi|161019170 mucin 5AC [Homo sapiens]                                  34   0.39 
gi|169171558 PREDICTED: hypothetical protein [Homo sapiens]            33   0.86 
gi|151301154 mucin 6, gastric [Homo sapiens]                           33   0.86 
gi|29294649 dicer1 [Homo sapiens]                                      32   1.9  
gi|29294651 dicer1 [Homo sapiens]                                      32   1.9  
gi|90403586 heparanase 2 [Homo sapiens]                                31   3.3  
gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens]       30   4.3  
gi|110349719 titin isoform N2-A [Homo sapiens]                         30   7.3  
gi|154759277 monocyte to macrophage differentiation-associated 2...    30   7.3  
gi|53829385 leucine rich repeat containing 37B [Homo sapiens]          30   7.3  
gi|62243374 MAD1-like 1 protein [Homo sapiens]                         30   7.3  
gi|62243369 MAD1-like 1 protein [Homo sapiens]                         30   7.3  
gi|62243332 MAD1-like 1 protein [Homo sapiens]                         30   7.3  

>gi|195963433 syncytin precursor [Homo sapiens]
          Length = 538

 Score = 1110 bits (2871), Expect = 0.0
 Identities = 538/538 (100%), Positives = 538/538 (100%)

Query: 1   MALPYHIFLFTVLLPSFTLTAPPPCRCMTSSSPYQEFLWRMQRPGNIDAPSYRSLSKGTP 60
           MALPYHIFLFTVLLPSFTLTAPPPCRCMTSSSPYQEFLWRMQRPGNIDAPSYRSLSKGTP
Sbjct: 1   MALPYHIFLFTVLLPSFTLTAPPPCRCMTSSSPYQEFLWRMQRPGNIDAPSYRSLSKGTP 60

Query: 61  TFTAHTHMPRNCYHSATLCMHANTHYWTGKMINPSCPGGLGVTVCWTYFTQTGMSDGGGV 120
           TFTAHTHMPRNCYHSATLCMHANTHYWTGKMINPSCPGGLGVTVCWTYFTQTGMSDGGGV
Sbjct: 61  TFTAHTHMPRNCYHSATLCMHANTHYWTGKMINPSCPGGLGVTVCWTYFTQTGMSDGGGV 120

Query: 121 QDQAREKHVKEVISQLTRVHGTSSPYKGLDLSKLHETLRTHTRLVSLFNTTLTGLHEVSA 180
           QDQAREKHVKEVISQLTRVHGTSSPYKGLDLSKLHETLRTHTRLVSLFNTTLTGLHEVSA
Sbjct: 121 QDQAREKHVKEVISQLTRVHGTSSPYKGLDLSKLHETLRTHTRLVSLFNTTLTGLHEVSA 180

Query: 181 QNPTNCWICLPLNFRPYVSIPVPEQWNNFSTEINTTSVLVGPLVSNLEITHTSNLTCVKF 240
           QNPTNCWICLPLNFRPYVSIPVPEQWNNFSTEINTTSVLVGPLVSNLEITHTSNLTCVKF
Sbjct: 181 QNPTNCWICLPLNFRPYVSIPVPEQWNNFSTEINTTSVLVGPLVSNLEITHTSNLTCVKF 240

Query: 241 SNTTYTTNSQCIRWVTPPTQIVCLPSGIFFVCGTSAYRCLNGSSESMCFLSFLVPPMTIY 300
           SNTTYTTNSQCIRWVTPPTQIVCLPSGIFFVCGTSAYRCLNGSSESMCFLSFLVPPMTIY
Sbjct: 241 SNTTYTTNSQCIRWVTPPTQIVCLPSGIFFVCGTSAYRCLNGSSESMCFLSFLVPPMTIY 300

Query: 301 TEQDLYSYVISKPRNKRVPILPFVIGAGVLGALGTGIGGITTSTQFYYKLSQELNGDMER 360
           TEQDLYSYVISKPRNKRVPILPFVIGAGVLGALGTGIGGITTSTQFYYKLSQELNGDMER
Sbjct: 301 TEQDLYSYVISKPRNKRVPILPFVIGAGVLGALGTGIGGITTSTQFYYKLSQELNGDMER 360

Query: 361 VADSLVTLQDQLNSLAAVVLQNRRALDLLTAERGGTCLFLGEECCYYVNQSGIVTEKVKE 420
           VADSLVTLQDQLNSLAAVVLQNRRALDLLTAERGGTCLFLGEECCYYVNQSGIVTEKVKE
Sbjct: 361 VADSLVTLQDQLNSLAAVVLQNRRALDLLTAERGGTCLFLGEECCYYVNQSGIVTEKVKE 420

Query: 421 IRDRIQRRAEELRNTGPWGLLSQWMPWILPFLGPLAAIILLLLFGPCIFNLLVNFVSSRI 480
           IRDRIQRRAEELRNTGPWGLLSQWMPWILPFLGPLAAIILLLLFGPCIFNLLVNFVSSRI
Sbjct: 421 IRDRIQRRAEELRNTGPWGLLSQWMPWILPFLGPLAAIILLLLFGPCIFNLLVNFVSSRI 480

Query: 481 EAVKLQMEPKMQSKTKIYRRPLDRPASPRSDVNDIKGTPPEEISAAQPLLRPNSAGSS 538
           EAVKLQMEPKMQSKTKIYRRPLDRPASPRSDVNDIKGTPPEEISAAQPLLRPNSAGSS
Sbjct: 481 EAVKLQMEPKMQSKTKIYRRPLDRPASPRSDVNDIKGTPPEEISAAQPLLRPNSAGSS 538


>gi|48949851 syncytin precursor [Homo sapiens]
          Length = 538

 Score = 1110 bits (2871), Expect = 0.0
 Identities = 538/538 (100%), Positives = 538/538 (100%)

Query: 1   MALPYHIFLFTVLLPSFTLTAPPPCRCMTSSSPYQEFLWRMQRPGNIDAPSYRSLSKGTP 60
           MALPYHIFLFTVLLPSFTLTAPPPCRCMTSSSPYQEFLWRMQRPGNIDAPSYRSLSKGTP
Sbjct: 1   MALPYHIFLFTVLLPSFTLTAPPPCRCMTSSSPYQEFLWRMQRPGNIDAPSYRSLSKGTP 60

Query: 61  TFTAHTHMPRNCYHSATLCMHANTHYWTGKMINPSCPGGLGVTVCWTYFTQTGMSDGGGV 120
           TFTAHTHMPRNCYHSATLCMHANTHYWTGKMINPSCPGGLGVTVCWTYFTQTGMSDGGGV
Sbjct: 61  TFTAHTHMPRNCYHSATLCMHANTHYWTGKMINPSCPGGLGVTVCWTYFTQTGMSDGGGV 120

Query: 121 QDQAREKHVKEVISQLTRVHGTSSPYKGLDLSKLHETLRTHTRLVSLFNTTLTGLHEVSA 180
           QDQAREKHVKEVISQLTRVHGTSSPYKGLDLSKLHETLRTHTRLVSLFNTTLTGLHEVSA
Sbjct: 121 QDQAREKHVKEVISQLTRVHGTSSPYKGLDLSKLHETLRTHTRLVSLFNTTLTGLHEVSA 180

Query: 181 QNPTNCWICLPLNFRPYVSIPVPEQWNNFSTEINTTSVLVGPLVSNLEITHTSNLTCVKF 240
           QNPTNCWICLPLNFRPYVSIPVPEQWNNFSTEINTTSVLVGPLVSNLEITHTSNLTCVKF
Sbjct: 181 QNPTNCWICLPLNFRPYVSIPVPEQWNNFSTEINTTSVLVGPLVSNLEITHTSNLTCVKF 240

Query: 241 SNTTYTTNSQCIRWVTPPTQIVCLPSGIFFVCGTSAYRCLNGSSESMCFLSFLVPPMTIY 300
           SNTTYTTNSQCIRWVTPPTQIVCLPSGIFFVCGTSAYRCLNGSSESMCFLSFLVPPMTIY
Sbjct: 241 SNTTYTTNSQCIRWVTPPTQIVCLPSGIFFVCGTSAYRCLNGSSESMCFLSFLVPPMTIY 300

Query: 301 TEQDLYSYVISKPRNKRVPILPFVIGAGVLGALGTGIGGITTSTQFYYKLSQELNGDMER 360
           TEQDLYSYVISKPRNKRVPILPFVIGAGVLGALGTGIGGITTSTQFYYKLSQELNGDMER
Sbjct: 301 TEQDLYSYVISKPRNKRVPILPFVIGAGVLGALGTGIGGITTSTQFYYKLSQELNGDMER 360

Query: 361 VADSLVTLQDQLNSLAAVVLQNRRALDLLTAERGGTCLFLGEECCYYVNQSGIVTEKVKE 420
           VADSLVTLQDQLNSLAAVVLQNRRALDLLTAERGGTCLFLGEECCYYVNQSGIVTEKVKE
Sbjct: 361 VADSLVTLQDQLNSLAAVVLQNRRALDLLTAERGGTCLFLGEECCYYVNQSGIVTEKVKE 420

Query: 421 IRDRIQRRAEELRNTGPWGLLSQWMPWILPFLGPLAAIILLLLFGPCIFNLLVNFVSSRI 480
           IRDRIQRRAEELRNTGPWGLLSQWMPWILPFLGPLAAIILLLLFGPCIFNLLVNFVSSRI
Sbjct: 421 IRDRIQRRAEELRNTGPWGLLSQWMPWILPFLGPLAAIILLLLFGPCIFNLLVNFVSSRI 480

Query: 481 EAVKLQMEPKMQSKTKIYRRPLDRPASPRSDVNDIKGTPPEEISAAQPLLRPNSAGSS 538
           EAVKLQMEPKMQSKTKIYRRPLDRPASPRSDVNDIKGTPPEEISAAQPLLRPNSAGSS
Sbjct: 481 EAVKLQMEPKMQSKTKIYRRPLDRPASPRSDVNDIKGTPPEEISAAQPLLRPNSAGSS 538


>gi|46485773 syncytin 2 [Homo sapiens]
          Length = 538

 Score =  187 bits (476), Expect = 2e-47
 Identities = 99/242 (40%), Positives = 151/242 (62%), Gaps = 29/242 (11%)

Query: 263 CLPS-GIFFVCGTSAYRCLNGSSESMCFLSFLVP-----------PMTIYTEQDLYSYVI 310
           CL + G F++CG S ++CL  +    C + ++ P           P+ IY    L     
Sbjct: 291 CLKTQGAFYICGQSIHQCLPSNWTGTCTIGYVTPDIFIAPGNLSLPIPIYGNSPL----- 345

Query: 311 SKPRNKR-VPILPFVIGAGVLGALGTGIGGITTSTQFYYKLSQELNGDMERVADSLVTLQ 369
             PR +R +  +P + G G+L   GTGI GIT ++  Y +LS+E+  +++ +A +L T+Q
Sbjct: 346 --PRVRRAIHFIPLLAGLGILAGTGTGIAGITKASLTYSQLSKEIANNIDTMAKALTTMQ 403

Query: 370 DQLNSLAAVVLQNRRALDLLTAERGGTCLFLGEECCYYVNQSGIVTEKVKEIRDRIQRRA 429
           +Q++SLAAVVLQNRR LD+LTA +GG CL L E+CC++VNQSG V + ++++ +    +A
Sbjct: 404 EQIDSLAAVVLQNRRGLDMLTAAQGGICLALDEKCCFWVNQSGKVQDNIRQLLN----QA 459

Query: 430 EELRNTGPWGLLS-----QWMPWILPFLGPLAAIILLLLFGPCIFNLLVNFVSSRIEAVK 484
             LR     G L+     +W  W+LP  GPL +++LLLLFGPC+ NL+  FVSSR++A+K
Sbjct: 460 SSLRERATQGWLNWEGTWKWFSWVLPLTGPLVSLLLLLLFGPCLLNLITQFVSSRLQAIK 519

Query: 485 LQ 486
           LQ
Sbjct: 520 LQ 521


>gi|239753837 PREDICTED: similar to Uncharacterized protein LP9056
           [Homo sapiens]
          Length = 563

 Score = 56.2 bits (134), Expect = 7e-08
 Identities = 54/229 (23%), Positives = 99/229 (43%), Gaps = 32/229 (13%)

Query: 266 SGIFFVCGTSAYRCLNGSSESMCFLSFLVPPMTIYTEQDLYSYVISKPRNKRVPILPFVI 325
           SG+FF+CG   Y+         C L +LVP +T Y    L +  I+  R+    + P   
Sbjct: 295 SGLFFLCGNGVYKGFPPKWSGRCGLGYLVPSLTRYLT--LNASQITNLRSFIHKVTPHRC 352

Query: 326 GAG---------------VLGALGTGIGGITTSTQFYYKLSQELNGDMERVADSLVTLQD 370
             G                + AL   +G           +S+ +  +      +L   Q 
Sbjct: 353 TQGDTDNPPLYCNPKDNSTIRALFPSLGTYDLEKAIL-NISKAMEQEFSATKQTLEAHQS 411

Query: 371 QLNSLAAVVLQNRRALDLLTAERGGTCLFLGEECCYYVNQSGIVTEKVKEIRDRIQRRAE 430
           +++SLA+   ++   LD+ T +R   C  +G++CC Y+N S    E++K    R+   +E
Sbjct: 412 KVSSLASASRKDH-VLDIPTTQRQTACGTVGKQCCLYINYS----EEIKSNIQRLHEASE 466

Query: 431 ELRNTG--PW-GLLSQWMPWILPFLGPLAAIILLLLFGPCIFNLLVNFV 476
            L+N     W G+ ++   W   +      ++L++LF  C+F  ++ +V
Sbjct: 467 NLKNVPLLDWQGIFAKVGDWFRSW----GYVLLIVLF--CLFIFVLIYV 509


>gi|239748400 PREDICTED: hypothetical protein XP_002346661 [Homo
           sapiens]
          Length = 563

 Score = 56.2 bits (134), Expect = 7e-08
 Identities = 54/229 (23%), Positives = 99/229 (43%), Gaps = 32/229 (13%)

Query: 266 SGIFFVCGTSAYRCLNGSSESMCFLSFLVPPMTIYTEQDLYSYVISKPRNKRVPILPFVI 325
           SG+FF+CG   Y+         C L +LVP +T Y    L +  I+  R+    + P   
Sbjct: 295 SGLFFLCGNGVYKGFPPKWSGRCGLGYLVPSLTRYLT--LNASQITNLRSFIHKVTPHRC 352

Query: 326 GAG---------------VLGALGTGIGGITTSTQFYYKLSQELNGDMERVADSLVTLQD 370
             G                + AL   +G           +S+ +  +      +L   Q 
Sbjct: 353 TQGDTDNPPLYCNPKDNSTIRALFPSLGTYDLEKAIL-NISKAMEQEFSATKQTLEAHQS 411

Query: 371 QLNSLAAVVLQNRRALDLLTAERGGTCLFLGEECCYYVNQSGIVTEKVKEIRDRIQRRAE 430
           +++SLA+   ++   LD+ T +R   C  +G++CC Y+N S    E++K    R+   +E
Sbjct: 412 KVSSLASASRKDH-VLDIPTTQRQTACGTVGKQCCLYINYS----EEIKSNIQRLHEASE 466

Query: 431 ELRNTG--PW-GLLSQWMPWILPFLGPLAAIILLLLFGPCIFNLLVNFV 476
            L+N     W G+ ++   W   +      ++L++LF  C+F  ++ +V
Sbjct: 467 NLKNVPLLDWQGIFAKVGDWFRSW----GYVLLIVLF--CLFIFVLIYV 509


>gi|239742330 PREDICTED: hypothetical protein XP_002342492 [Homo
           sapiens]
          Length = 563

 Score = 56.2 bits (134), Expect = 7e-08
 Identities = 54/229 (23%), Positives = 99/229 (43%), Gaps = 32/229 (13%)

Query: 266 SGIFFVCGTSAYRCLNGSSESMCFLSFLVPPMTIYTEQDLYSYVISKPRNKRVPILPFVI 325
           SG+FF+CG   Y+         C L +LVP +T Y    L +  I+  R+    + P   
Sbjct: 295 SGLFFLCGNGVYKGFPPKWSGRCGLGYLVPSLTRYLT--LNASQITNLRSFIHKVTPHRC 352

Query: 326 GAG---------------VLGALGTGIGGITTSTQFYYKLSQELNGDMERVADSLVTLQD 370
             G                + AL   +G           +S+ +  +      +L   Q 
Sbjct: 353 TQGDTDNPPLYCNPKDNSTIRALFPSLGTYDLEKAIL-NISKAMEQEFSATKQTLEAHQS 411

Query: 371 QLNSLAAVVLQNRRALDLLTAERGGTCLFLGEECCYYVNQSGIVTEKVKEIRDRIQRRAE 430
           +++SLA+   ++   LD+ T +R   C  +G++CC Y+N S    E++K    R+   +E
Sbjct: 412 KVSSLASASRKDH-VLDIPTTQRQTACGTVGKQCCLYINYS----EEIKSNIQRLHEASE 466

Query: 431 ELRNTG--PW-GLLSQWMPWILPFLGPLAAIILLLLFGPCIFNLLVNFV 476
            L+N     W G+ ++   W   +      ++L++LF  C+F  ++ +V
Sbjct: 467 NLKNVPLLDWQGIFAKVGDWFRSW----GYVLLIVLF--CLFIFVLIYV 509


>gi|145651814 endogenous retroviral sequence 3 [Homo sapiens]
          Length = 604

 Score = 48.1 bits (113), Expect = 2e-05
 Identities = 52/185 (28%), Positives = 72/185 (38%), Gaps = 23/185 (12%)

Query: 265 PSGIFFVCGTSAYRCLNGSSESMCFL-----SFLVPPMT--------IYTEQDLYS---Y 308
           PSG++++CG  AYR L       C L     SF + P+         IY E    S    
Sbjct: 414 PSGLYWICGPQAYRQLPAKWSGACVLGTIRPSFFLMPLKQGEALGYPIYDETKRKSKRGI 473

Query: 309 VISKPRNKRVPILPFVIGAGVLGALGTGIGGITTSTQFY---YKLSQELNGDMERVADSL 365
            I   ++   P    +   G       G+ G  T         +L   L       A +L
Sbjct: 474 TIGDWKDNEWPPERIIQYYGPATWAEDGMWGYRTPVYMLNRIIRLQAVLEIITNETAGAL 533

Query: 366 VTLQDQLNSLAAVVLQNRRALDLLTAERGGTC-LFLGEECCYYVNQSGIVTEKVKEIRDR 424
             L  Q   +  V+ QNR ALD L A+  G C  F    CC  ++  G V   +KEI  +
Sbjct: 534 NLLAQQATKMRNVIYQNRLALDYLLAQEEGVCGKFNLTNCCLELDDEGKV---IKEITAK 590

Query: 425 IQRRA 429
           IQ+ A
Sbjct: 591 IQKLA 595


>gi|161019170 mucin 5AC [Homo sapiens]
          Length = 6207

 Score = 33.9 bits (76), Expect = 0.39
 Identities = 68/321 (21%), Positives = 109/321 (33%), Gaps = 45/321 (14%)

Query: 14   LPSFTLTAPPPCRCMTSSSPYQEFLWRMQRPGNIDAPSYRSLSKGTPTFTAHTHMPRNCY 73
            LP+   TA  P     ++ P         R      P+  ++S  TP+ T     P   +
Sbjct: 4980 LPALRSTATTPTATSFTAIPSSSLGTTWTRLSQTTTPT-ATMSTATPSST-----PETVH 5033

Query: 74   HSATLCMHANTHYWTGKMINPSCPGGLG-----VTVCWTYFTQTGMSDGGGVQDQAREKH 128
             S  L   A T   TG +  PS   G        T   T FT T  S  G     A    
Sbjct: 5034 TSTVLTATATTTGATGSVATPSSTPGTAHTTKVPTTTTTGFTATPSSSPG----TALTPP 5089

Query: 129  VKEVISQLTRVHGTSSPYKGLDLSKLHETLRTHTR---------------------LVSL 167
                +S ++ +H +S+P +    S +  T  T TR                       + 
Sbjct: 5090 TTTPMSTMSTIHTSSTP-ETTHTSTVLTTTATMTRATNSTATPSSTLGTTRILTELTTTA 5148

Query: 168  FNTTLTGLHEVSAQNPTNCWICLPLNFRPYVSIPVPEQWNNFSTEINTTSVLVGP-LVSN 226
              T  TG     +  P   WI    +    V +P      + +T  +T      P +V+ 
Sbjct: 5149 TTTAATGSTATLSSTPGTTWILTEPSTIATVMVPT----GSTATASSTLGTAHTPKVVTT 5204

Query: 227  LEITHTSNLTCVKFSNTTYTTNSQCIRWVTPPT-QIVCLPSGIFFVCGTSAYRCLNGSSE 285
            +    T+  + V  S+T  TT +  +   + PT  +  + S +      + +   + S+ 
Sbjct: 5205 MATMPTATASTVPSSSTVGTTRTPAVLPSSLPTFSVSTVSSSVLTTLRPTGFPSSHFSTP 5264

Query: 286  SMC--FLSFLVPPMTIYTEQD 304
              C  F  F  P   IY + D
Sbjct: 5265 CFCRAFGQFFSPGEVIYNKTD 5285


>gi|169171558 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 303

 Score = 32.7 bits (73), Expect = 0.86
 Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 6/69 (8%)

Query: 257 PPTQIVCLPS------GIFFVCGTSAYRCLNGSSESMCFLSFLVPPMTIYTEQDLYSYVI 310
           PP ++   PS      G+   C T+   C    S S+  L  L P +TI T Q+L S   
Sbjct: 32  PPQEVPMWPSEDHGSAGLQLQCSTTGTSCWGHESSSIDVLLSLAPVITIATRQNLCSLAS 91

Query: 311 SKPRNKRVP 319
           ++P  +  P
Sbjct: 92  AEPGEQYRP 100


>gi|151301154 mucin 6, gastric [Homo sapiens]
          Length = 2439

 Score = 32.7 bits (73), Expect = 0.86
 Identities = 58/254 (22%), Positives = 87/254 (34%), Gaps = 30/254 (11%)

Query: 18   TLTAPPPCRCMTSSSPYQEFLWRMQRPGNIDAPSYRSLSKGTPTFTAHTHMPRNCYHSAT 77
            T T PPP     + S +      +   G   A S  + +K + +  +HT        S+T
Sbjct: 1650 TGTIPPPTTLKATGSTHTAPTMTLTTSGTSQALSSLNTAKTSTSLHSHT--------SST 1701

Query: 78   LCMHANTHYWTGKMINPSCPGGLGVTVCWTYFTQTGMS-----DGGGVQDQAREKHVKEV 132
                A +   T    NP+  G   +TV  +  +Q+  S         +       H  EV
Sbjct: 1702 HHAEATSTSTTNITPNPTSTGTPPMTVTTSGTSQSRSSFSTAKTSTSLHSHTSSTHHPEV 1761

Query: 133  ISQLTRVHGTSSPYKGLDLSKLHETLRTHTRLVSLFNT--TLTGLHEVSAQNPTNCWICL 190
             S  T     +    G      H T  T +RL + F T    TG   +S+  P       
Sbjct: 1762 TSTSTTSITPNHTSTGTRTPVAHTTSATSSRLPTPFTTHSPPTGTTPISSTGPVTATSFQ 1821

Query: 191  PLNFRPYVSIP---VPEQWNNFSTEINTTSVLVGPLVSNLEITHTSNLTCVKFSNTTYTT 247
                 P  S P   +P    +FST + T S            THT  +       T+ + 
Sbjct: 1822 TTTTYPTPSHPHTTLPTHVPSFSTSLVTPS------------THTVIIPTHTQMATSASI 1869

Query: 248  NSQCIRWVTPPTQI 261
            +S     + PPT I
Sbjct: 1870 HSMPTGTIPPPTTI 1883


>gi|29294649 dicer1 [Homo sapiens]
          Length = 1922

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 23/83 (27%), Positives = 33/83 (39%)

Query: 310 ISKPRNKRVPILPFVIGAGVLGALGTGIGGITTSTQFYYKLSQELNGDMERVADSLVTLQ 369
           I  PR  +V +L   +    +  L TG G    +     +LS ++ GD  R     V L 
Sbjct: 41  IYTPRKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFSRNGKRTVFLV 100

Query: 370 DQLNSLAAVVLQNRRALDLLTAE 392
           +  N +A  V   R   DL   E
Sbjct: 101 NSANQVAQQVSAVRTHSDLKVGE 123


>gi|29294651 dicer1 [Homo sapiens]
          Length = 1922

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 23/83 (27%), Positives = 33/83 (39%)

Query: 310 ISKPRNKRVPILPFVIGAGVLGALGTGIGGITTSTQFYYKLSQELNGDMERVADSLVTLQ 369
           I  PR  +V +L   +    +  L TG G    +     +LS ++ GD  R     V L 
Sbjct: 41  IYTPRKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFSRNGKRTVFLV 100

Query: 370 DQLNSLAAVVLQNRRALDLLTAE 392
           +  N +A  V   R   DL   E
Sbjct: 101 NSANQVAQQVSAVRTHSDLKVGE 123


>gi|90403586 heparanase 2 [Homo sapiens]
          Length = 592

 Score = 30.8 bits (68), Expect = 3.3
 Identities = 27/109 (24%), Positives = 47/109 (43%), Gaps = 19/109 (17%)

Query: 278 RCLNGSSESMCFLSF--LVPPMTIYTEQDLYSYVISKPRNKRVPILPFVIGAGVLGALGT 335
           R +NGS     ++    L+ P+ IY+   LY   I +PR   + +L      G +   G+
Sbjct: 272 RAVNGSQLGKDYIQLKSLLQPIRIYSRASLYGPNIGRPRKNVIALLD-----GFMKVAGS 326

Query: 336 GIGGITTSTQFYYKLSQELNGDMERVADSLV-----TLQDQLNSLAAVV 379
            +  +T    +       ++G + +V D L      TL DQ+  +  VV
Sbjct: 327 TVDAVTWQHCY-------IDGRVVKVMDFLKTRLLDTLSDQIRKIQKVV 368


>gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens]
          Length = 2217

 Score = 30.4 bits (67), Expect = 4.3
 Identities = 13/32 (40%), Positives = 17/32 (53%)

Query: 501 PLDRPASPRSDVNDIKGTPPEEISAAQPLLRP 532
           P D P SP   V +++ TPP+     QP L P
Sbjct: 921 PTDVPPSPHHTVQNMRATPPQPALPPQPTLPP 952


>gi|110349719 titin isoform N2-A [Homo sapiens]
          Length = 33423

 Score = 29.6 bits (65), Expect = 7.3
 Identities = 23/75 (30%), Positives = 32/75 (42%), Gaps = 9/75 (12%)

Query: 199  SIPVPEQWNNFSTEINTTSVL--------VGPLVSNLEITHTSNLTCVKFSNTTYTTNSQ 250
            S+P+  QW     EI+T++          V   V+NLE+  T+N TC K SN        
Sbjct: 5263 SLPISAQWFKDGKEISTSAKYRLVCHERSVSLEVNNLELEDTANYTC-KVSNVAGDDACS 5321

Query: 251  CIRWVTPPTQIVCLP 265
             I  V  P   +  P
Sbjct: 5322 GILTVKEPPSFLVKP 5336


>gi|154759277 monocyte to macrophage differentiation-associated 2
           isoform 1 [Homo sapiens]
          Length = 270

 Score = 29.6 bits (65), Expect = 7.3
 Identities = 11/37 (29%), Positives = 17/37 (45%)

Query: 432 LRNTGPWGLLSQWMPWILPFLGPLAAIILLLLFGPCI 468
           LR  GPW    +W+ WI+  +G +         G C+
Sbjct: 125 LRELGPWASHMRWLVWIMASVGTIYVFFFHERTGSCV 161


>gi|53829385 leucine rich repeat containing 37B [Homo sapiens]
          Length = 947

 Score = 29.6 bits (65), Expect = 7.3
 Identities = 31/117 (26%), Positives = 45/117 (38%), Gaps = 16/117 (13%)

Query: 421 IRDRIQRRAEELRNTGPWGLLSQWMPWILPFL-GPLAAIILLLLFGPCIFNLLVNFVSSR 479
           ++D +Q  +  L    PW   S  +PW  P    P AA        P  F+ L    SS+
Sbjct: 31  VKDPLQLTSNPLGPPEPWSSRSSHLPWESPHAPAPPAA--------PGDFDYLGPSASSQ 82

Query: 480 IEAVKLQMEPKMQSKTKIYRRPLDRPASP------RSDVNDIKGTPPEEISAAQPLL 530
           + A+  +    +    K      + P  P        D+ND K TP E +    PLL
Sbjct: 83  MSALPQEPTENLAPFLKELDSAGELPLGPEPFLAAHQDLND-KRTPEERLPEVVPLL 138


>gi|62243374 MAD1-like 1 protein [Homo sapiens]
          Length = 718

 Score = 29.6 bits (65), Expect = 7.3
 Identities = 21/90 (23%), Positives = 45/90 (50%), Gaps = 2/90 (2%)

Query: 340 ITTSTQFYYKLSQELNGDMERVADSLVTLQDQLNSLAAVVLQNRRALDLLTAERGGTCLF 399
           +T+S +   K  Q+L  ++ +V+  L+  + +  +  A+  + ++ + LLT ER G    
Sbjct: 355 VTSSARGLEKARQQLQEELRQVSGQLLEERKKRETHEALARRLQKRVLLLTKERDGMRAI 414

Query: 400 LG--EECCYYVNQSGIVTEKVKEIRDRIQR 427
           LG  +        S  +T +++E  D +Q+
Sbjct: 415 LGSYDSELTPAEYSPQLTRRMREAEDMVQK 444


>gi|62243369 MAD1-like 1 protein [Homo sapiens]
          Length = 718

 Score = 29.6 bits (65), Expect = 7.3
 Identities = 21/90 (23%), Positives = 45/90 (50%), Gaps = 2/90 (2%)

Query: 340 ITTSTQFYYKLSQELNGDMERVADSLVTLQDQLNSLAAVVLQNRRALDLLTAERGGTCLF 399
           +T+S +   K  Q+L  ++ +V+  L+  + +  +  A+  + ++ + LLT ER G    
Sbjct: 355 VTSSARGLEKARQQLQEELRQVSGQLLEERKKRETHEALARRLQKRVLLLTKERDGMRAI 414

Query: 400 LG--EECCYYVNQSGIVTEKVKEIRDRIQR 427
           LG  +        S  +T +++E  D +Q+
Sbjct: 415 LGSYDSELTPAEYSPQLTRRMREAEDMVQK 444


>gi|62243332 MAD1-like 1 protein [Homo sapiens]
          Length = 718

 Score = 29.6 bits (65), Expect = 7.3
 Identities = 21/90 (23%), Positives = 45/90 (50%), Gaps = 2/90 (2%)

Query: 340 ITTSTQFYYKLSQELNGDMERVADSLVTLQDQLNSLAAVVLQNRRALDLLTAERGGTCLF 399
           +T+S +   K  Q+L  ++ +V+  L+  + +  +  A+  + ++ + LLT ER G    
Sbjct: 355 VTSSARGLEKARQQLQEELRQVSGQLLEERKKRETHEALARRLQKRVLLLTKERDGMRAI 414

Query: 400 LG--EECCYYVNQSGIVTEKVKEIRDRIQR 427
           LG  +        S  +T +++E  D +Q+
Sbjct: 415 LGSYDSELTPAEYSPQLTRRMREAEDMVQK 444


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.135    0.426 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,158,101
Number of Sequences: 37866
Number of extensions: 1030084
Number of successful extensions: 2856
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 2829
Number of HSP's gapped (non-prelim): 38
length of query: 538
length of database: 18,247,518
effective HSP length: 107
effective length of query: 431
effective length of database: 14,195,856
effective search space: 6118413936
effective search space used: 6118413936
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.