DICER1 24980

Name: DICER1	Sequence: fasta or formatted (1922aa)		NCBI GI: 29294651
Description: dicer1		Referenced in: DEAD / H Helicase Family MicroRNAs RNases and RNA Stability Stem Cells and Early Development
Other entries for this name: alt mRNA [1922aa] dicer1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.7 110 3 C cysteine 2.5 48 2 D aspartate 6.5 124 4 E glutamate 7.9 151 4 F phenylalanine 3.9 74 2 G glycine 4.3 82 2 H histidine 2.2 42 1 I isoleucine 5.1 98 2 K lysine 6.6 127 3 L leucine 10.2 197 2 M methionine 2.2 42 2 N asparagine 4.7 91 2 P proline 5.9 113 2 Q glutamine 3.4 65 2 R arginine 5.1 98 3 S serine 8.1 155 3 T threonine 5.1 98 2 V valine 5.6 108 2 W tryptophan 0.8 16 1 Y tyrosine 4.3 83 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 dicer1 DICER1 1.000 dicer1 DDX58 0.023 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide RIG-I [... DHX58 0.019 RNA helicase LGP2 IFIH1 0.014 interferon induced with helicase C domain 1 FANCM 0.011 Fanconi anemia, complementation group M RNASEN 0.010 ribonuclease III, nuclear isoform 2 RNASEN 0.010 ribonuclease III, nuclear isoform 1 DDX47 0.007 DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 isoform 2 ... DDX47 0.007 DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 isoform 1 ... DDX3X 0.006 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3 [Homo... DDX3Y 0.006 DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked ... DDX3Y 0.006 DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked [... EIF4A2 0.006 eukaryotic translation initiation factor 4A2 EIF4A1 0.006 eukaryotic translation initiation factor 4A isoform 1... EIF4A3 0.006 eukaryotic translation initiation factor 4A, isoform ... DDX27 0.005 DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 FAM161A 0.005 hypothetical protein LOC84140 DDX4 0.005 DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 isoform 3 ... DDX4 0.005 DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 isoform 1 [... DDX4 0.005 DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 isoform 2 ... DDX20 0.005 DEAD (Asp-Glu-Ala-Asp) box polypeptide 20 DDX24 0.005 DEAD (Asp-Glu-Ala-Asp) box polypeptide 24 DDX55 0.005 DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 DDX21 0.005 DEAD (Asp-Glu-Ala-Asp) box polypeptide 21 LOC652147 0.004 PREDICTED: similar to U5 snRNP-specific 200kD prote... DDX6 0.004 DEAD (Asp-Glu-Ala-Asp) box polypeptide 6 DDX50 0.004 nucleolar protein GU2 DDX41 0.004 DEAD-box protein abstrakt YTHDC1 0.004 splicing factor YT521-B isoform 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.