Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: LRRC37B Sequence: fasta or formatted (947aa) NCBI GI: 53829385
Description:

leucine rich repeat containing 37B

Referenced in:

Testes and Sperm

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.5         52           2
 C cysteine            1.7         16           2
 D aspartate           4.2         40           2
 E glutamate           9.3         88           2
 F phenylalanine       2.2         21           1
 G glycine             3.8         36           2
 H histidine           2.5         24           1
 I isoleucine          4.0         38           3
 K lysine              5.2         49           2
 L leucine            12.7        120           2
 M methionine          1.9         18           1
 N asparagine          4.0         38           1
 P proline             9.8         93           3
 Q glutamine           6.8         64           2
 R arginine            2.6         25           1
 S serine              8.1         77           3
 T threonine           7.8         74           2
 V valine              4.5         43           2
 W tryptophan          1.4         13           1
 Y tyrosine            1.9         18           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   leucine rich repeat containing 37B 
LOC100294335          0.387   PREDICTED: similar to c114 SLIT-like testicular pro...
LOC100294335          0.387   PREDICTED: similar to c114 SLIT-like testicular pro...
LRRC37A               0.385   leucine rich repeat containing 37A 
LRRC37A3              0.384   leucine rich repeat containing 37, member A3 
LRRC37A2              0.383   c114 SLIT-like testicular protein 
LOC100288229          0.242   PREDICTED: hypothetical protein XP_002343606 
MLL2                  0.022   myeloid/lymphoid or mixed-lineage leukemia 2 
SLITRK4               0.022   slit and trk like 4 protein 
ZAN                   0.022   zonadhesin isoform 3 
ZAN                   0.022   zonadhesin isoform 6 
RXFP1                 0.022   relaxin/insulin-like family peptide receptor 1 [Homo...
FLJ22184              0.021   PREDICTED: hypothetical protein FLJ22184 
LRTM1                 0.021   leucine-rich repeats and transmembrane domains 1 [Ho...
PRG4                  0.021   proteoglycan 4 isoform D 
PRG4                  0.021   proteoglycan 4 isoform C 
PRG4                  0.021   proteoglycan 4 isoform B 
PRG4                  0.021   proteoglycan 4 isoform A 
LRRTM2                0.021   leucine rich repeat transmembrane neuronal 2 
SLIT2                 0.020   slit homolog 2 
LRRTM4                0.020   leucine rich repeat transmembrane neuronal 4 isofor...
LRRTM4                0.020   leucine rich repeat transmembrane neuronal 4 isofor...
LRIG2                 0.020   leucine-rich repeats and immunoglobulin-like domains ...
LRIG3                 0.020   leucine-rich repeats and immunoglobulin-like domains...
LRIG3                 0.020   leucine-rich repeats and immunoglobulin-like domain...
GPR124                0.019   G protein-coupled receptor 124 
TTN                   0.018   titin isoform N2-A 
SLIT1                 0.018   slit homolog 1 
SLITRK2               0.018   SLIT and NTRK-like family, member 2 
SLITRK2               0.018   SLIT and NTRK-like family, member 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press