Guide to the Human Genome
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Name: MRPS7 Sequence: fasta or formatted (242aa) NCBI GI: 186928852
Description:

mitochondrial ribosomal protein S7

Referenced in:

Ribosomes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.1         22           2
 C cysteine            0.8          2           1
 D aspartate           2.5          6           1
 E glutamate           7.9         19           3
 F phenylalanine       3.3          8           1
 G glycine             4.5         11           2
 H histidine           3.3          8           1
 I isoleucine          4.5         11           1
 K lysine              9.9         24           2
 L leucine             9.5         23           2
 M methionine          4.1         10           3
 N asparagine          2.5          6           1
 P proline             6.2         15           1
 Q glutamine           4.1         10           1
 R arginine            8.3         20           4
 S serine              3.7          9           2
 T threonine           4.1         10           1
 V valine              6.2         15           1
 W tryptophan          2.1          5           2
 Y tyrosine            3.3          8           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   mitochondrial ribosomal protein S7 
RPS5                  0.026   ribosomal protein S5 
WNK3                  0.013   WNK lysine deficient protein kinase 3 isoform 1 [Hom...
WNK3                  0.013   WNK lysine deficient protein kinase 3 isoform 2 [Hom...
NOC3L                 0.013   nucleolar complex associated 3 homolog 
HMG20A                0.011   high-mobility group 20A 
DST                   0.009   dystonin isoform 4 
DST                   0.009   dystonin isoform 3 
DST                   0.009   dystonin isoform 2 
DST                   0.009   dystonin isoform 1 
DST                   0.009   dystonin isoform 1eA precursor 
GAST                  0.009   gastrin preproprotein 
FRMPD3                0.009   PREDICTED: FERM and PDZ domain containing 3 
FRMPD3                0.009   PREDICTED: FERM and PDZ domain containing 3 
FRMPD3                0.009   PREDICTED: FERM and PDZ domain containing 3 
PALM2-AKAP2           0.006   PALM2-AKAP2 protein isoform 2 
PALM2-AKAP2           0.006   PALM2-AKAP2 protein isoform 1 
AKAP2                 0.006   A kinase (PRKA) anchor protein 2 isoform 2 
AKAP2                 0.006   A kinase (PRKA) anchor protein 2 isoform 1 
PECI                  0.006   peroxisomal D3,D2-enoyl-CoA isomerase isoform 2 [Hom...
PECI                  0.006   peroxisomal D3,D2-enoyl-CoA isomerase isoform 1 [Hom...
ZFHX2                 0.006   PREDICTED: zinc finger homeobox 2 
ZFHX2                 0.006   PREDICTED: zinc finger homeobox 2 
ZFHX2                 0.006   PREDICTED: zinc finger homeobox 2 
POLA1                 0.006   DNA-directed DNA polymerase alpha 1 
FRY                   0.006   furry homolog 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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