Guide to the Human Genome
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Name: NOC3L Sequence: fasta or formatted (800aa) NCBI GI: 20806097
Description:

nucleolar complex associated 3 homolog

Referenced in:

Nucleus and Nucleolus

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.5         44           2
 C cysteine            1.0          8           2
 D aspartate           4.2         34           2
 E glutamate          10.6         85           7
 F phenylalanine       3.8         30           2
 G glycine             2.9         23           1
 H histidine           2.6         21           1
 I isoleucine          5.6         45           2
 K lysine             12.1         97           3
 L leucine            12.9        103           3
 M methionine          2.4         19           2
 N asparagine          3.2         26           2
 P proline             4.4         35           2
 Q glutamine           4.2         34           2
 R arginine            5.5         44           2
 S serine              6.4         51           3
 T threonine           4.8         38           2
 V valine              5.5         44           2
 W tryptophan          0.4          3           1
 Y tyrosine            2.0         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   nucleolar complex associated 3 homolog 
ERC2                  0.020   cytomatrix protein p110 
CENPE                 0.020   centromere protein E 
WDR87                 0.019   NYD-SP11 protein 
TTN                   0.019   titin isoform N2-A 
LOC727832             0.019   golgi autoantigen, golgin subfamily a-like 
LOC400352             0.018   PREDICTED: similar to Putative golgin subfamily A m...
LOC100132816          0.018   PREDICTED: similar to Putative golgin subfamily A m...
CCDC146               0.018   coiled-coil domain containing 146 
LOC283685             0.018   PREDICTED: golgi autoantigen, golgin subfamily a-li...
MYH11                 0.018   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
MYH11                 0.018   smooth muscle myosin heavy chain 11 isoform SM1B [Ho...
MYH11                 0.018   smooth muscle myosin heavy chain 11 isoform SM2B [Ho...
MYH11                 0.018   smooth muscle myosin heavy chain 11 isoform SM2A [Ho...
C14orf145             0.018   hypothetical protein LOC145508 
ROCK2                 0.018   Rho-associated, coiled-coil containing protein kinas...
CGNL1                 0.018   cingulin-like 1 
GCC2                  0.017   GRIP and coiled-coil domain-containing 2 
MYH10                 0.017   myosin, heavy polypeptide 10, non-muscle 
LOC645202             0.016   PREDICTED: hypothetical protein LOC645202 
LOC283685             0.016   PREDICTED: golgi autoantigen, golgin subfamily a-li...
NOC4L                 0.016   nucleolar complex associated 4 homolog 
MYH13                 0.016   myosin, heavy polypeptide 13, skeletal muscle [Homo...
EEA1                  0.016   early endosome antigen 1, 162kD 
GOLGA4                0.016   golgi autoantigen, golgin subfamily a, 4 
INCENP                0.016   inner centromere protein antigens 135/155kDa isofor...
MYH7                  0.016   myosin, heavy chain 7, cardiac muscle, beta 
TAF3                  0.016   RNA polymerase II transcription factor TAFII140 [Ho...
AKAP9                 0.016   A-kinase anchor protein 9 isoform 2 
AKAP9                 0.016   A-kinase anchor protein 9 isoform 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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