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Search of human proteins with 186700625
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|186700625 Rab-like GTP-binding protein 1 isoform 2 [Homo
sapiens]
(520 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|186700625 Rab-like GTP-binding protein 1 isoform 2 [Homo sapi... 1084 0.0
gi|186700623 Rab-like GTP-binding protein 1 isoform 1 [Homo sapi... 735 0.0
gi|157168329 formin 1 [Homo sapiens] 54 5e-07
gi|4758988 RAB1A, member RAS oncogene family isoform 1 [Homo sap... 50 7e-06
gi|40548415 dishevelled associated activator of morphogenesis 2 ... 49 1e-05
gi|119395760 diaphanous 1 isoform 2 [Homo sapiens] 49 1e-05
gi|119395758 diaphanous 1 isoform 1 [Homo sapiens] 49 1e-05
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 49 1e-05
gi|5453555 ras-related nuclear protein [Homo sapiens] 48 2e-05
gi|7662302 TBK1 binding protein 1 [Homo sapiens] 47 4e-05
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 47 4e-05
gi|237757312 synaptojanin 1 isoform c [Homo sapiens] 46 7e-05
gi|237757310 synaptojanin 1 isoform a [Homo sapiens] 46 7e-05
gi|237757308 synaptojanin 1 isoform b [Homo sapiens] 46 7e-05
gi|237757326 synaptojanin 1 isoform d [Homo sapiens] 46 7e-05
gi|34147513 RAB7, member RAS oncogene family [Homo sapiens] 46 7e-05
gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo sap... 46 9e-05
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 46 9e-05
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 46 9e-05
gi|4758996 Ras-related protein Rab-33A [Homo sapiens] 46 9e-05
gi|33356148 formin-like 1 [Homo sapiens] 46 9e-05
gi|7661922 RAB21, member RAS oncogene family [Homo sapiens] 45 1e-04
gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens] 45 2e-04
gi|6382071 diaphanous 2 isoform 12C [Homo sapiens] 45 2e-04
gi|5803003 diaphanous 2 isoform 156 [Homo sapiens] 45 2e-04
gi|115298682 HBxAg transactivated protein 2 [Homo sapiens] 45 2e-04
gi|189181724 proteoglycan 4 isoform D [Homo sapiens] 45 2e-04
gi|189181722 proteoglycan 4 isoform C [Homo sapiens] 45 2e-04
gi|189181720 proteoglycan 4 isoform B [Homo sapiens] 45 2e-04
gi|67190163 proteoglycan 4 isoform A [Homo sapiens] 45 2e-04
>gi|186700625 Rab-like GTP-binding protein 1 isoform 2 [Homo
sapiens]
Length = 520
Score = 1084 bits (2804), Expect = 0.0
Identities = 520/520 (100%), Positives = 520/520 (100%)
Query: 1 MFSALKKLVGSDQAPGRDKNIPAGLQSMNQALQRRFAKGVQYNMKIVIRGDRNTGKTALW 60
MFSALKKLVGSDQAPGRDKNIPAGLQSMNQALQRRFAKGVQYNMKIVIRGDRNTGKTALW
Sbjct: 1 MFSALKKLVGSDQAPGRDKNIPAGLQSMNQALQRRFAKGVQYNMKIVIRGDRNTGKTALW 60
Query: 61 HRLQGRPFVEEYIPTQEIQVTSIHWSYKTTDDIVKVEVWDVVDKGKCKKRGDGLKMENDP 120
HRLQGRPFVEEYIPTQEIQVTSIHWSYKTTDDIVKVEVWDVVDKGKCKKRGDGLKMENDP
Sbjct: 61 HRLQGRPFVEEYIPTQEIQVTSIHWSYKTTDDIVKVEVWDVVDKGKCKKRGDGLKMENDP 120
Query: 121 QEAESEMALDAEFLDVYKNCNGVVMMFDITKQWTFNYILRELPKVPTHVPVCVLGNYRDM 180
QEAESEMALDAEFLDVYKNCNGVVMMFDITKQWTFNYILRELPKVPTHVPVCVLGNYRDM
Sbjct: 121 QEAESEMALDAEFLDVYKNCNGVVMMFDITKQWTFNYILRELPKVPTHVPVCVLGNYRDM 180
Query: 181 GEHRVILPDDVRDFIDNLDRPPGSSYFRYAESSMKNSFGLKYLHKFFNIPFLQLQRETLL 240
GEHRVILPDDVRDFIDNLDRPPGSSYFRYAESSMKNSFGLKYLHKFFNIPFLQLQRETLL
Sbjct: 181 GEHRVILPDDVRDFIDNLDRPPGSSYFRYAESSMKNSFGLKYLHKFFNIPFLQLQRETLL 240
Query: 241 RQLETNQLDMDATLEELSVQQETEDQNYGIFLEMMEARSRGHASPLAANGQSPSPGSQSP 300
RQLETNQLDMDATLEELSVQQETEDQNYGIFLEMMEARSRGHASPLAANGQSPSPGSQSP
Sbjct: 241 RQLETNQLDMDATLEELSVQQETEDQNYGIFLEMMEARSRGHASPLAANGQSPSPGSQSP 300
Query: 301 VVPAGAVSTGSSSPGTPQPAPQLPLNAAPPSSVPPVPPSEALPPPACPSAPAPRRSIISR 360
VVPAGAVSTGSSSPGTPQPAPQLPLNAAPPSSVPPVPPSEALPPPACPSAPAPRRSIISR
Sbjct: 301 VVPAGAVSTGSSSPGTPQPAPQLPLNAAPPSSVPPVPPSEALPPPACPSAPAPRRSIISR 360
Query: 361 PPPWGWRLRGALGRRGQWPPWGGGRACHCLGRHLPLYHRLCRCPVAAVCASELEEAGHWW 420
PPPWGWRLRGALGRRGQWPPWGGGRACHCLGRHLPLYHRLCRCPVAAVCASELEEAGHWW
Sbjct: 361 PPPWGWRLRGALGRRGQWPPWGGGRACHCLGRHLPLYHRLCRCPVAAVCASELEEAGHWW 420
Query: 421 SPGWALQVLGLQAQCEPALQEGRGQLASARLGGHPGPLGAEPPVFLRDVTEAQEGPVRVC 480
SPGWALQVLGLQAQCEPALQEGRGQLASARLGGHPGPLGAEPPVFLRDVTEAQEGPVRVC
Sbjct: 421 SPGWALQVLGLQAQCEPALQEGRGQLASARLGGHPGPLGAEPPVFLRDVTEAQEGPVRVC 480
Query: 481 LQRLGRGRLAVGCALPRHLLALRAHLGPQHAYGSASGREP 520
LQRLGRGRLAVGCALPRHLLALRAHLGPQHAYGSASGREP
Sbjct: 481 LQRLGRGRLAVGCALPRHLLALRAHLGPQHAYGSASGREP 520
>gi|186700623 Rab-like GTP-binding protein 1 isoform 1 [Homo
sapiens]
Length = 729
Score = 735 bits (1897), Expect = 0.0
Identities = 360/360 (100%), Positives = 360/360 (100%)
Query: 1 MFSALKKLVGSDQAPGRDKNIPAGLQSMNQALQRRFAKGVQYNMKIVIRGDRNTGKTALW 60
MFSALKKLVGSDQAPGRDKNIPAGLQSMNQALQRRFAKGVQYNMKIVIRGDRNTGKTALW
Sbjct: 1 MFSALKKLVGSDQAPGRDKNIPAGLQSMNQALQRRFAKGVQYNMKIVIRGDRNTGKTALW 60
Query: 61 HRLQGRPFVEEYIPTQEIQVTSIHWSYKTTDDIVKVEVWDVVDKGKCKKRGDGLKMENDP 120
HRLQGRPFVEEYIPTQEIQVTSIHWSYKTTDDIVKVEVWDVVDKGKCKKRGDGLKMENDP
Sbjct: 61 HRLQGRPFVEEYIPTQEIQVTSIHWSYKTTDDIVKVEVWDVVDKGKCKKRGDGLKMENDP 120
Query: 121 QEAESEMALDAEFLDVYKNCNGVVMMFDITKQWTFNYILRELPKVPTHVPVCVLGNYRDM 180
QEAESEMALDAEFLDVYKNCNGVVMMFDITKQWTFNYILRELPKVPTHVPVCVLGNYRDM
Sbjct: 121 QEAESEMALDAEFLDVYKNCNGVVMMFDITKQWTFNYILRELPKVPTHVPVCVLGNYRDM 180
Query: 181 GEHRVILPDDVRDFIDNLDRPPGSSYFRYAESSMKNSFGLKYLHKFFNIPFLQLQRETLL 240
GEHRVILPDDVRDFIDNLDRPPGSSYFRYAESSMKNSFGLKYLHKFFNIPFLQLQRETLL
Sbjct: 181 GEHRVILPDDVRDFIDNLDRPPGSSYFRYAESSMKNSFGLKYLHKFFNIPFLQLQRETLL 240
Query: 241 RQLETNQLDMDATLEELSVQQETEDQNYGIFLEMMEARSRGHASPLAANGQSPSPGSQSP 300
RQLETNQLDMDATLEELSVQQETEDQNYGIFLEMMEARSRGHASPLAANGQSPSPGSQSP
Sbjct: 241 RQLETNQLDMDATLEELSVQQETEDQNYGIFLEMMEARSRGHASPLAANGQSPSPGSQSP 300
Query: 301 VVPAGAVSTGSSSPGTPQPAPQLPLNAAPPSSVPPVPPSEALPPPACPSAPAPRRSIISR 360
VVPAGAVSTGSSSPGTPQPAPQLPLNAAPPSSVPPVPPSEALPPPACPSAPAPRRSIISR
Sbjct: 301 VVPAGAVSTGSSSPGTPQPAPQLPLNAAPPSSVPPVPPSEALPPPACPSAPAPRRSIISR 360
>gi|157168329 formin 1 [Homo sapiens]
Length = 1196
Score = 53.5 bits (127), Expect = 5e-07
Identities = 51/161 (31%), Positives = 69/161 (42%), Gaps = 20/161 (12%)
Query: 225 KFFNIPFLQLQRETLLRQLET-------NQLDMD----ATLEELSVQQETEDQNYGIF-L 272
K F +Q RET L+ E+ NQL ++L +LS + +D + + +
Sbjct: 575 KTFRNVCVQTDRETFLKPCESESKTTRSNQLVPKKLNISSLSQLSPPNDHKDIHAALQPM 634
Query: 273 EMMEARSRGHASPLAANGQSPSP-----GSQSPVVPAGAVSTGSSSPGTPQPAPQLP--L 325
E M + + P A+ P P GS SP P VS G P P P P LP
Sbjct: 635 EGMASNQQKALPPPPASIPPPPPLPSGLGSLSPAPPMPPVSAGPPLPPPPPPPPPLPPPS 694
Query: 326 NAAPPSSVPPVP-PSEALPPPACPSAPAPRRSIISRPPPWG 365
+A PP PP P P+ PP PAP ++ PPP G
Sbjct: 695 SAGPPPPPPPPPLPNSPAPPNPGGPPPAPPPPGLAPPPPPG 735
>gi|4758988 RAB1A, member RAS oncogene family isoform 1 [Homo
sapiens]
Length = 205
Score = 49.7 bits (117), Expect = 7e-06
Identities = 39/182 (21%), Positives = 83/182 (45%), Gaps = 39/182 (21%)
Query: 42 YNMKIVIRGDRNTGKTALWHRLQGRPFVEEYIPT--QEIQVTSIHWSYKTTDDIVKVEVW 99
Y K+++ GD GK+ L R + E YI T + ++ +I KT +K+++W
Sbjct: 10 YLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKT----IKLQIW 65
Query: 100 DVVDKGKCKKRGDGLKMENDPQEAESEMALDAEFLDVYKNCNGVVMMFDITKQWTFNYIL 159
D + + + + + + Y+ +G+++++D+T Q +FN +
Sbjct: 66 DTAGQERFR-------------------TITSSY---YRGAHGIIVVYDVTDQESFNNVK 103
Query: 160 RELPKVPTH----VPVCVLGNYRDMGEHRVILPDDVRDFIDNLDRPPGSSYFRYAESSMK 215
+ L ++ + V ++GN D+ +V+ ++F D+L P + E+S K
Sbjct: 104 QWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIP-------FLETSAK 156
Query: 216 NS 217
N+
Sbjct: 157 NA 158
>gi|40548415 dishevelled associated activator of morphogenesis 2
[Homo sapiens]
Length = 1067
Score = 48.9 bits (115), Expect = 1e-05
Identities = 37/115 (32%), Positives = 49/115 (42%), Gaps = 5/115 (4%)
Query: 239 LLRQLETNQLDMDA-TLEELSVQQETEDQNYGIFLEMMEAR-SRGHASPLAANGQSPSPG 296
L+ +LE + + + TLE+ + + + E E R +RG + L A S G
Sbjct: 458 LVSRLERKERECETKTLEKEEMMRTLNKMKDKLARESQELRQARGQVAELVAQLSELSTG 517
Query: 297 SQSPVVPAGAVSTGSSSPGT---PQPAPQLPLNAAPPSSVPPVPPSEALPPPACP 348
S P G T SSS T P P P LP PP PP+PP PP P
Sbjct: 518 PVSSPPPPGGPLTLSSSMTTNDLPPPPPPLPFACCPPPPPPPLPPGGPPTPPGAP 572
>gi|119395760 diaphanous 1 isoform 2 [Homo sapiens]
Length = 1263
Score = 48.5 bits (114), Expect = 1e-05
Identities = 38/125 (30%), Positives = 58/125 (46%), Gaps = 10/125 (8%)
Query: 241 RQLETNQLDMDATLEELSVQQETEDQNYGIFLEMMEARSRGHASPLAANGQSPSPGSQSP 300
+Q+ T + D++A + +L+ + + E+ +A+ + AA PS S++P
Sbjct: 519 QQIATEKQDLEAEVSQLTGEVAK------LTKELEDAKKEMASLSAAAITVPPSVPSRAP 572
Query: 301 VVPAGAVSTGSSSPGTPQPAPQLPLNAAPPSSVPPVPPSEALPPPACPSAP--APRRSII 358
V PA + S + P PAP PP PP PP LP C S+P P + I
Sbjct: 573 VPPAPPLPGDSGTIIPPPPAPGDSTTPPPPPPPPPPPP--PLPGGVCISSPPSLPGGTAI 630
Query: 359 SRPPP 363
S PPP
Sbjct: 631 SPPPP 635
Score = 42.0 bits (97), Expect = 0.001
Identities = 29/82 (35%), Positives = 39/82 (47%), Gaps = 10/82 (12%)
Query: 285 PLAANGQSPSPGSQSPVVPAGA-VSTGSSSPGTPQ--PAPQLPLNAAPPSSVPPVPPSEA 341
PL+ + P P P +P G + + SS PG P P LP +A P PP+P S
Sbjct: 635 PLSGDATIPPP----PPLPEGVGIPSPSSLPGGTAIPPPPPLPGSARIPPPPPPLPGSAG 690
Query: 342 LPPPACPSAPAPRRSIISRPPP 363
+PP P P P + + PPP
Sbjct: 691 IPP---PPPPLPGEAGMPPPPP 709
Score = 42.0 bits (97), Expect = 0.001
Identities = 29/84 (34%), Positives = 39/84 (46%), Gaps = 8/84 (9%)
Query: 293 PSPGSQSPVVPAGAVSTGSSSPGTPQPAPQLPLNAAPPSSVPPVPPSEALPP----PACP 348
P PGS + + P GS+ G P P P LP A P PP+P +PP P P
Sbjct: 671 PLPGS-ARIPPPPPPLPGSA--GIPPPPPPLPGEAGMPPPPPPLPGGPGIPPPPPFPGGP 727
Query: 349 SAPAPRRSI-ISRPPPWGWRLRGA 371
P P + + PPP+G+ + A
Sbjct: 728 GIPPPPPGMGMPPPPPFGFGVPAA 751
Score = 38.5 bits (88), Expect = 0.015
Identities = 30/86 (34%), Positives = 37/86 (43%), Gaps = 15/86 (17%)
Query: 285 PLAANGQSPSPGSQSPVVPAG-AVSTGSSSPGT---PQPAPQLPLNAAPPSSVPPVPPSE 340
PL PSP S +P G A+ PG+ P P P LP +A P PP+P
Sbjct: 647 PLPEGVGIPSPSS----LPGGTAIPPPPPLPGSARIPPPPPPLPGSAGIPPPPPPLPGEA 702
Query: 341 ALPPPA--CPSAPAPRRSIISRPPPW 364
+PPP P P I PPP+
Sbjct: 703 GMPPPPPPLPGGPG-----IPPPPPF 723
Score = 36.2 bits (82), Expect = 0.075
Identities = 37/118 (31%), Positives = 44/118 (37%), Gaps = 32/118 (27%)
Query: 293 PSPGSQSPVVPAGA-VSTGSSSPG--------------TPQPAPQLPLNAAPPS------ 331
P P P +P G +S+ S PG T P P LP PS
Sbjct: 603 PPPPPPPPPLPGGVCISSPPSLPGGTAISPPPPLSGDATIPPPPPLPEGVGIPSPSSLPG 662
Query: 332 --SVPPVPP---SEALPPPACPSAPAPRRSIISRPPPWGWRLRGALGRRGQWPPWGGG 384
++PP PP S +PP P P P + I PPP L G G PP GG
Sbjct: 663 GTAIPPPPPLPGSARIPP---PPPPLPGSAGIPPPPP---PLPGEAGMPPPPPPLPGG 714
>gi|119395758 diaphanous 1 isoform 1 [Homo sapiens]
Length = 1272
Score = 48.5 bits (114), Expect = 1e-05
Identities = 38/125 (30%), Positives = 58/125 (46%), Gaps = 10/125 (8%)
Query: 241 RQLETNQLDMDATLEELSVQQETEDQNYGIFLEMMEARSRGHASPLAANGQSPSPGSQSP 300
+Q+ T + D++A + +L+ + + E+ +A+ + AA PS S++P
Sbjct: 528 QQIATEKQDLEAEVSQLTGEVAK------LTKELEDAKKEMASLSAAAITVPPSVPSRAP 581
Query: 301 VVPAGAVSTGSSSPGTPQPAPQLPLNAAPPSSVPPVPPSEALPPPACPSAP--APRRSII 358
V PA + S + P PAP PP PP PP LP C S+P P + I
Sbjct: 582 VPPAPPLPGDSGTIIPPPPAPGDSTTPPPPPPPPPPPP--PLPGGVCISSPPSLPGGTAI 639
Query: 359 SRPPP 363
S PPP
Sbjct: 640 SPPPP 644
Score = 42.0 bits (97), Expect = 0.001
Identities = 29/82 (35%), Positives = 39/82 (47%), Gaps = 10/82 (12%)
Query: 285 PLAANGQSPSPGSQSPVVPAGA-VSTGSSSPGTPQ--PAPQLPLNAAPPSSVPPVPPSEA 341
PL+ + P P P +P G + + SS PG P P LP +A P PP+P S
Sbjct: 644 PLSGDATIPPP----PPLPEGVGIPSPSSLPGGTAIPPPPPLPGSARIPPPPPPLPGSAG 699
Query: 342 LPPPACPSAPAPRRSIISRPPP 363
+PP P P P + + PPP
Sbjct: 700 IPP---PPPPLPGEAGMPPPPP 718
Score = 42.0 bits (97), Expect = 0.001
Identities = 29/84 (34%), Positives = 39/84 (46%), Gaps = 8/84 (9%)
Query: 293 PSPGSQSPVVPAGAVSTGSSSPGTPQPAPQLPLNAAPPSSVPPVPPSEALPP----PACP 348
P PGS + + P GS+ G P P P LP A P PP+P +PP P P
Sbjct: 680 PLPGS-ARIPPPPPPLPGSA--GIPPPPPPLPGEAGMPPPPPPLPGGPGIPPPPPFPGGP 736
Query: 349 SAPAPRRSI-ISRPPPWGWRLRGA 371
P P + + PPP+G+ + A
Sbjct: 737 GIPPPPPGMGMPPPPPFGFGVPAA 760
Score = 38.5 bits (88), Expect = 0.015
Identities = 30/86 (34%), Positives = 37/86 (43%), Gaps = 15/86 (17%)
Query: 285 PLAANGQSPSPGSQSPVVPAG-AVSTGSSSPGT---PQPAPQLPLNAAPPSSVPPVPPSE 340
PL PSP S +P G A+ PG+ P P P LP +A P PP+P
Sbjct: 656 PLPEGVGIPSPSS----LPGGTAIPPPPPLPGSARIPPPPPPLPGSAGIPPPPPPLPGEA 711
Query: 341 ALPPPA--CPSAPAPRRSIISRPPPW 364
+PPP P P I PPP+
Sbjct: 712 GMPPPPPPLPGGPG-----IPPPPPF 732
Score = 36.2 bits (82), Expect = 0.075
Identities = 37/118 (31%), Positives = 44/118 (37%), Gaps = 32/118 (27%)
Query: 293 PSPGSQSPVVPAGA-VSTGSSSPG--------------TPQPAPQLPLNAAPPS------ 331
P P P +P G +S+ S PG T P P LP PS
Sbjct: 612 PPPPPPPPPLPGGVCISSPPSLPGGTAISPPPPLSGDATIPPPPPLPEGVGIPSPSSLPG 671
Query: 332 --SVPPVPP---SEALPPPACPSAPAPRRSIISRPPPWGWRLRGALGRRGQWPPWGGG 384
++PP PP S +PP P P P + I PPP L G G PP GG
Sbjct: 672 GTAIPPPPPLPGSARIPP---PPPPLPGSAGIPPPPP---PLPGEAGMPPPPPPLPGG 723
>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
tract binding protein associated) [Homo sapiens]
Length = 707
Score = 48.5 bits (114), Expect = 1e-05
Identities = 42/134 (31%), Positives = 51/134 (38%), Gaps = 21/134 (15%)
Query: 283 ASPLAANGQSPSPG---------SQSPVVPAGAVSTGSSSPG-TPQPAPQL---PLNAAP 329
+ P+ A G P+PG S P P + + S PG TP P P + P A P
Sbjct: 107 SKPVVAQGPGPAPGVGSAPPASSSAPPATPPTSGAPPGSGPGPTPTPPPAVTSAPPGAPP 166
Query: 330 P----SSVPPVPPSEALPPPACPSAPAPRRSIISRPPPWGWRLRGALGRRGQWPPWGGGR 385
P S VP PP PPP + P P P P G + G+ P GGG
Sbjct: 167 PTPPSSGVPTTPPQAGGPPPPPAAVPGPGPGPKQGPGPGGPK----GGKMPGGPKPGGGP 222
Query: 386 ACHCLGRHLPLYHR 399
G H HR
Sbjct: 223 GLSTPGGHPKPPHR 236
Score = 35.4 bits (80), Expect = 0.13
Identities = 30/86 (34%), Positives = 36/86 (41%), Gaps = 18/86 (20%)
Query: 282 HASPLAANGQSPSP-GSQSPVVPAGAVSTGSSSPGTPQPAPQLPLNAAPP--SSVPPV-P 337
H P P P S PVV G P PAP + +APP SS PP P
Sbjct: 90 HPQPHQQQQPPPPPQDSSKPVVAQG-----------PGPAPGV--GSAPPASSSAPPATP 136
Query: 338 PSEALPPPACPS-APAPRRSIISRPP 362
P+ PP + P P P ++ S PP
Sbjct: 137 PTSGAPPGSGPGPTPTPPPAVTSAPP 162
Score = 35.0 bits (79), Expect = 0.17
Identities = 22/80 (27%), Positives = 26/80 (32%), Gaps = 8/80 (10%)
Query: 290 GQSPSPGSQSPVVPAGAVSTGSSSPGTPQPAPQLPLNAAPP-------SSVPPVPPSEAL 342
G P P +P P QP PQ P PP PP PP ++
Sbjct: 48 GPGPGQSGPKPPIPPPPPHQQQQQPPPQQPPPQQPPPHQPPPHPQPHQQQQPPPPPQDS- 106
Query: 343 PPPACPSAPAPRRSIISRPP 362
P P P + S PP
Sbjct: 107 SKPVVAQGPGPAPGVGSAPP 126
Score = 33.9 bits (76), Expect = 0.37
Identities = 19/59 (32%), Positives = 23/59 (38%), Gaps = 5/59 (8%)
Query: 310 GSSSPGTPQPAPQLPLNAAPPSSV-----PPVPPSEALPPPACPSAPAPRRSIISRPPP 363
G PG Q P+ P+ PP P PP + PP P P P + PPP
Sbjct: 45 GPMGPGPGQSGPKPPIPPPPPHQQQQQPPPQQPPPQQPPPHQPPPHPQPHQQQQPPPPP 103
>gi|5453555 ras-related nuclear protein [Homo sapiens]
Length = 216
Score = 48.1 bits (113), Expect = 2e-05
Identities = 48/202 (23%), Positives = 81/202 (40%), Gaps = 43/202 (21%)
Query: 41 QYNMKIVIRGDRNTGKTALWHRLQGRPFVEEYIPTQEIQVTSIHWSYKTTDDIVKVEVWD 100
Q K+V+ GD TGKT R F ++Y+ T ++V + + T +K VWD
Sbjct: 8 QVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPL--VFHTNRGPIKFNVWD 65
Query: 101 VVDKGKCKKRGDGLKMENDPQEAESEMALDAEFLDVYKNCNGVVMMFDITKQWTFNYI-- 158
+ K DG Y ++MFD+T + T+ +
Sbjct: 66 TAGQEKFGGLRDG----------------------YYIQAQCAIIMFDVTSRVTYKNVPN 103
Query: 159 -LRELPKVPTHVPVCVLGNYRDMGEHRVILPDDVRDFIDNLDRPPGSSYFRYAESSMKNS 217
R+L +V ++P+ + GN D+ + +V V NL +Y + S K++
Sbjct: 104 WHRDLVRVCENIPIVLCGNKVDIKDRKVKAKSIVFHRKKNL---------QYYDISAKSN 154
Query: 218 FGLKYLHKFFNIPFLQLQRETL 239
+ F PFL L R+ +
Sbjct: 155 YN-------FEKPFLWLARKLI 169
>gi|7662302 TBK1 binding protein 1 [Homo sapiens]
Length = 615
Score = 47.0 bits (110), Expect = 4e-05
Identities = 35/105 (33%), Positives = 43/105 (40%), Gaps = 17/105 (16%)
Query: 276 EARSRGHASPLAANGQSPSPGSQSPVVPAGAVST---------GSSSPGTPQPAPQLPLN 326
+ARS G + SP+P SP PA A SP P P+PQ +
Sbjct: 326 QARSGGQRHSPLSQRHSPAPQCPSPSPPARAAPPCPPCQSPVPQRRSPVPPCPSPQQRRS 385
Query: 327 AAPPSSVPPVPPSEALPPPACPSAPAPRRSII--------SRPPP 363
A PS PVP + PP+C S RRS + RPPP
Sbjct: 386 PASPSCPSPVPQRRSPVPPSCQSPSPQRRSPVPPSCPAPQPRPPP 430
Score = 31.6 bits (70), Expect = 1.8
Identities = 47/195 (24%), Positives = 62/195 (31%), Gaps = 62/195 (31%)
Query: 283 ASPLAANGQSPSPGSQSPVVPAGAVSTGSS--SPGTPQPAPQ------------------ 322
A+P QSP P +SPV P + S SP P P PQ
Sbjct: 356 AAPPCPPCQSPVPQRRSPVPPCPSPQQRRSPASPSCPSPVPQRRSPVPPSCQSPSPQRRS 415
Query: 323 -LPLNAAPPSSVPPVPPSEALPPPACPSAPAPRRSIISR---PPPWGWRLRGALGRR--- 375
+P + P PP PP P R++ R PP G GRR
Sbjct: 416 PVPPSCPAPQPRPPPPP------------PPGERTLAERAYAKPPSHHVKAGFQGRRSYS 463
Query: 376 ---------GQWPPWGGGRACHCLGRHLPLYHRLCRCPVAAVCASELEEAGHWWSPGWAL 426
G PPW L P SEL G SP A
Sbjct: 464 ELAEGAAYAGASPPW--------------LQAEAATLPKPRAYGSELYGPGRPLSPRRAF 509
Query: 427 QVLGLQAQCEPALQE 441
+ + L+ + +P+ ++
Sbjct: 510 EGIRLRFEKQPSEED 524
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 47.0 bits (110), Expect = 4e-05
Identities = 36/115 (31%), Positives = 43/115 (37%), Gaps = 33/115 (28%)
Query: 280 RGHASPLAANGQSPSPGSQSPVVP------------AGAVSTGSSSPGTPQPAPQL---- 323
RG + AA P+P P P A A +T SPG QP P+
Sbjct: 116 RGAPAAAAAAAPPPTPAPPPPPAPVAAAAPARAPRAAAAAATAPPSPGPAQPGPRAQRAA 175
Query: 324 ------PLNAAPPSSVPPVPPSEALPP---------PACPSAPAPRRSIISRPPP 363
P AAPP+ PP P A PP P P PAP + +PPP
Sbjct: 176 PLAAPPPAPAAPPAVAPPAGPRRAPPPAVAAREPPLPPPPQPPAPPQQ--QQPPP 228
Score = 40.8 bits (94), Expect = 0.003
Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 10/87 (11%)
Query: 287 AANGQSPSPGSQSPVVP-----AGAVSTGSSSPGTPQPAPQ-LPLNAAPPSSVPPVPPSE 340
AA Q P G+ P P A A + ++ P TP P P P+ AA P+ P +
Sbjct: 96 AARVQPPRRGATPPAPPRAPRGAPAAAAAAAPPPTPAPPPPPAPVAAAAPARAPRAAAAA 155
Query: 341 ALPPPAC-PSAPAP---RRSIISRPPP 363
A PP+ P+ P P R + ++ PPP
Sbjct: 156 ATAPPSPGPAQPGPRAQRAAPLAAPPP 182
Score = 38.5 bits (88), Expect = 0.015
Identities = 28/91 (30%), Positives = 34/91 (37%), Gaps = 16/91 (17%)
Query: 277 ARSRGHASPLAANGQSPSPGSQSP------------VVPAGAVSTGSSSPGTPQPAPQLP 324
A +R + AA PSPG P PA A + P P+ AP
Sbjct: 144 APARAPRAAAAAATAPPSPGPAQPGPRAQRAAPLAAPPPAPAAPPAVAPPAGPRRAPPPA 203
Query: 325 LNAA----PPSSVPPVPPSEALPPPACPSAP 351
+ A PP PP PP + PPP P P
Sbjct: 204 VAAREPPLPPPPQPPAPPQQQQPPPPQPQPP 234
Score = 36.6 bits (83), Expect = 0.057
Identities = 29/101 (28%), Positives = 39/101 (38%), Gaps = 22/101 (21%)
Query: 284 SPLAANGQSPSPGSQSPVVPAGAVSTGSSSPGTPQPAPQLPLNAAPPSS----------- 332
+P AA + +P S P P G + ++ P PAP P APP+
Sbjct: 148 APRAAAAAATAPPSPGPAQP-GPRAQRAAPLAAPPPAPAAPPAVAPPAGPRRAPPPAVAA 206
Query: 333 ----VPPVPPSEALPPPACPSAPAPRRSIISRPPPWGWRLR 369
+PP P A P P P P +PPP G +R
Sbjct: 207 REPPLPPPPQPPAPPQQQQPPPPQP------QPPPEGGAVR 241
Score = 32.3 bits (72), Expect = 1.1
Identities = 22/64 (34%), Positives = 27/64 (42%), Gaps = 4/64 (6%)
Query: 283 ASPLAANGQSPS--PGSQSPVVPAGAVSTGSSSPGTPQPAPQLPLNAAPPSSVPPVPPSE 340
A+PLAA +P+ P P P A ++ P P P P APP P PP
Sbjct: 174 AAPLAAPPPAPAAPPAVAPPAGPRRAPPPAVAAREPPLPPPPQP--PAPPQQQQPPPPQP 231
Query: 341 ALPP 344
PP
Sbjct: 232 QPPP 235
>gi|237757312 synaptojanin 1 isoform c [Homo sapiens]
Length = 1295
Score = 46.2 bits (108), Expect = 7e-05
Identities = 33/101 (32%), Positives = 46/101 (45%), Gaps = 20/101 (19%)
Query: 282 HASPLAANGQSPSPGS-------QSPVVPAGAVST--------GSSSPGTPQPAPQLPLN 326
H P +++G SP S QSP + G V + S +PG P A P++
Sbjct: 1029 HLQPSSSSGLGTSPSSSPRTSPCQSPTISEGPVPSLPIRPSRAPSRTPGPPS-AQSSPID 1087
Query: 327 AAPPSSVPPVPPSEAL----PPPACPSAPAPRRSIISRPPP 363
A P + +P P++ L PPP P AP R + RPPP
Sbjct: 1088 AQPATPLPQKDPAQPLEPKRPPPPRPVAPPTRPAPPQRPPP 1128
Score = 39.7 bits (91), Expect = 0.007
Identities = 41/150 (27%), Positives = 55/150 (36%), Gaps = 16/150 (10%)
Query: 249 DMDATLEELSVQQETEDQNYGIFLEMMEA-RSRGHASPLAANGQSPS-------PGSQSP 300
D A +EEL Q + G+ + R+ SP + G PS S++P
Sbjct: 1017 DYSAEVEELLPQHLQPSSSSGLGTSPSSSPRTSPCQSPTISEGPVPSLPIRPSRAPSRTP 1076
Query: 301 VVPAGAVSTGSSSPGTPQPA--PQLPLNAAPPSSVPPVPPSE------ALPPPACPSAPA 352
P+ S + P TP P P PL P PV P PPP+ +PA
Sbjct: 1077 GPPSAQSSPIDAQPATPLPQKDPAQPLEPKRPPPPRPVAPPTRPAPPQRPPPPSGARSPA 1136
Query: 353 PRRSIISRPPPWGWRLRGALGRRGQWPPWG 382
P R P G + +GR P G
Sbjct: 1137 PTRKEFGAPKSPGTTRKDNIGRSQPSPQAG 1166
Score = 35.0 bits (79), Expect = 0.17
Identities = 27/81 (33%), Positives = 33/81 (40%), Gaps = 9/81 (11%)
Query: 291 QSPSPGSQSPVVPAGAVSTGSSSPG-TPQPAPQLPLNAAPPSSVPPVPPSEALPPPACP- 348
QS + S + P T +S G T P P P A PP S P PP++ L P P
Sbjct: 1193 QSHARASAGRLTPESQSKTSETSKGSTFLPEPLKPQAAFPPQSSLP-PPAQRLQEPLVPV 1251
Query: 349 ------SAPAPRRSIISRPPP 363
S P P +PPP
Sbjct: 1252 AAPMPQSGPQPNLETPPQPPP 1272
>gi|237757310 synaptojanin 1 isoform a [Homo sapiens]
Length = 1612
Score = 46.2 bits (108), Expect = 7e-05
Identities = 33/101 (32%), Positives = 46/101 (45%), Gaps = 20/101 (19%)
Query: 282 HASPLAANGQSPSPGS-------QSPVVPAGAVST--------GSSSPGTPQPAPQLPLN 326
H P +++G SP S QSP + G V + S +PG P A P++
Sbjct: 1068 HLQPSSSSGLGTSPSSSPRTSPCQSPTISEGPVPSLPIRPSRAPSRTPGPPS-AQSSPID 1126
Query: 327 AAPPSSVPPVPPSEAL----PPPACPSAPAPRRSIISRPPP 363
A P + +P P++ L PPP P AP R + RPPP
Sbjct: 1127 AQPATPLPQKDPAQPLEPKRPPPPRPVAPPTRPAPPQRPPP 1167
Score = 37.7 bits (86), Expect = 0.026
Identities = 40/136 (29%), Positives = 53/136 (38%), Gaps = 19/136 (13%)
Query: 249 DMDATLEELSVQQETEDQNYGIFLEMMEA-RSRGHASPLAANGQSPS-------PGSQSP 300
D A +EEL Q + G+ + R+ SP + G PS S++P
Sbjct: 1056 DYSAEVEELLPQHLQPSSSSGLGTSPSSSPRTSPCQSPTISEGPVPSLPIRPSRAPSRTP 1115
Query: 301 VVPAGAVSTGSSSPGTPQPA--PQLPLNAA-PPSSVPPVPPSEALPP-----PACPSAPA 352
P+ S + P TP P P PL PP P PP+ PP P+ +PA
Sbjct: 1116 GPPSAQSSPIDAQPATPLPQKDPAQPLEPKRPPPPRPVAPPTRPAPPQRPPPPSGARSPA 1175
Query: 353 PRRSI---ISRPPPWG 365
P R I PP G
Sbjct: 1176 PTRKEFGGIGAPPSPG 1191
Score = 35.0 bits (79), Expect = 0.17
Identities = 27/81 (33%), Positives = 33/81 (40%), Gaps = 9/81 (11%)
Query: 291 QSPSPGSQSPVVPAGAVSTGSSSPG-TPQPAPQLPLNAAPPSSVPPVPPSEALPPPACP- 348
QS + S + P T +S G T P P P A PP S P PP++ L P P
Sbjct: 1248 QSHARASAGRLTPESQSKTSETSKGSTFLPEPLKPQAAFPPQSSLP-PPAQRLQEPLVPV 1306
Query: 349 ------SAPAPRRSIISRPPP 363
S P P +PPP
Sbjct: 1307 AAPMPQSGPQPNLETPPQPPP 1327
Score = 30.8 bits (68), Expect = 3.1
Identities = 25/89 (28%), Positives = 37/89 (41%), Gaps = 10/89 (11%)
Query: 264 EDQNYGIFLEMMEARSRGHASPLAANGQSPSPGSQSPVVPAGAVSTGSSS---PGTPQPA 320
E++++G+ + +S+ S L N S GS + T S P P
Sbjct: 1525 EEEDFGV-----KGKSKSACSDLLGNQPSSFSGSNLTLNDDWNKGTNVSFCVLPSRRPPP 1579
Query: 321 PQLPLNAAPPSSVPPVPPSEALPPPACPS 349
P +PL PP + PPV P L A P+
Sbjct: 1580 PPVPL--LPPGTSPPVDPFTTLASKASPT 1606
>gi|237757308 synaptojanin 1 isoform b [Homo sapiens]
Length = 1350
Score = 46.2 bits (108), Expect = 7e-05
Identities = 33/101 (32%), Positives = 46/101 (45%), Gaps = 20/101 (19%)
Query: 282 HASPLAANGQSPSPGS-------QSPVVPAGAVST--------GSSSPGTPQPAPQLPLN 326
H P +++G SP S QSP + G V + S +PG P A P++
Sbjct: 1068 HLQPSSSSGLGTSPSSSPRTSPCQSPTISEGPVPSLPIRPSRAPSRTPGPPS-AQSSPID 1126
Query: 327 AAPPSSVPPVPPSEAL----PPPACPSAPAPRRSIISRPPP 363
A P + +P P++ L PPP P AP R + RPPP
Sbjct: 1127 AQPATPLPQKDPAQPLEPKRPPPPRPVAPPTRPAPPQRPPP 1167
Score = 37.7 bits (86), Expect = 0.026
Identities = 40/136 (29%), Positives = 53/136 (38%), Gaps = 19/136 (13%)
Query: 249 DMDATLEELSVQQETEDQNYGIFLEMMEA-RSRGHASPLAANGQSPS-------PGSQSP 300
D A +EEL Q + G+ + R+ SP + G PS S++P
Sbjct: 1056 DYSAEVEELLPQHLQPSSSSGLGTSPSSSPRTSPCQSPTISEGPVPSLPIRPSRAPSRTP 1115
Query: 301 VVPAGAVSTGSSSPGTPQPA--PQLPLNAA-PPSSVPPVPPSEALPP-----PACPSAPA 352
P+ S + P TP P P PL PP P PP+ PP P+ +PA
Sbjct: 1116 GPPSAQSSPIDAQPATPLPQKDPAQPLEPKRPPPPRPVAPPTRPAPPQRPPPPSGARSPA 1175
Query: 353 PRRSI---ISRPPPWG 365
P R I PP G
Sbjct: 1176 PTRKEFGGIGAPPSPG 1191
Score = 35.0 bits (79), Expect = 0.17
Identities = 27/81 (33%), Positives = 33/81 (40%), Gaps = 9/81 (11%)
Query: 291 QSPSPGSQSPVVPAGAVSTGSSSPG-TPQPAPQLPLNAAPPSSVPPVPPSEALPPPACP- 348
QS + S + P T +S G T P P P A PP S P PP++ L P P
Sbjct: 1248 QSHARASAGRLTPESQSKTSETSKGSTFLPEPLKPQAAFPPQSSLP-PPAQRLQEPLVPV 1306
Query: 349 ------SAPAPRRSIISRPPP 363
S P P +PPP
Sbjct: 1307 AAPMPQSGPQPNLETPPQPPP 1327
>gi|237757326 synaptojanin 1 isoform d [Homo sapiens]
Length = 1526
Score = 46.2 bits (108), Expect = 7e-05
Identities = 33/101 (32%), Positives = 46/101 (45%), Gaps = 20/101 (19%)
Query: 282 HASPLAANGQSPSPGS-------QSPVVPAGAVST--------GSSSPGTPQPAPQLPLN 326
H P +++G SP S QSP + G V + S +PG P A P++
Sbjct: 1024 HLQPSSSSGLGTSPSSSPRTSPCQSPTISEGPVPSLPIRPSRAPSRTPGPPS-AQSSPID 1082
Query: 327 AAPPSSVPPVPPSEAL----PPPACPSAPAPRRSIISRPPP 363
A P + +P P++ L PPP P AP R + RPPP
Sbjct: 1083 AQPATPLPQKDPAQPLEPKRPPPPRPVAPPTRPAPPQRPPP 1123
Score = 37.0 bits (84), Expect = 0.044
Identities = 36/125 (28%), Positives = 48/125 (38%), Gaps = 14/125 (11%)
Query: 249 DMDATLEELSVQQETEDQNYGIFLEMMEA-RSRGHASPLAANGQSPS-------PGSQSP 300
D A +EEL Q + G+ + R+ SP + G PS S++P
Sbjct: 1012 DYSAEVEELLPQHLQPSSSSGLGTSPSSSPRTSPCQSPTISEGPVPSLPIRPSRAPSRTP 1071
Query: 301 VVPAGAVSTGSSSPGTPQPA--PQLPLNAAPPSSVPPVPPSEALPPPACPSAPAPRRSII 358
P+ S + P TP P P PL P PV P PP P P+ R
Sbjct: 1072 GPPSAQSSPIDAQPATPLPQKDPAQPLEPKRPPPPRPVAPPTRPAPPQRPPPPSGR---- 1127
Query: 359 SRPPP 363
S+P P
Sbjct: 1128 SQPSP 1132
Score = 35.0 bits (79), Expect = 0.17
Identities = 27/81 (33%), Positives = 33/81 (40%), Gaps = 9/81 (11%)
Query: 291 QSPSPGSQSPVVPAGAVSTGSSSPG-TPQPAPQLPLNAAPPSSVPPVPPSEALPPPACP- 348
QS + S + P T +S G T P P P A PP S P PP++ L P P
Sbjct: 1162 QSHARASAGRLTPESQSKTSETSKGSTFLPEPLKPQAAFPPQSSLP-PPAQRLQEPLVPV 1220
Query: 349 ------SAPAPRRSIISRPPP 363
S P P +PPP
Sbjct: 1221 AAPMPQSGPQPNLETPPQPPP 1241
Score = 30.8 bits (68), Expect = 3.1
Identities = 25/89 (28%), Positives = 37/89 (41%), Gaps = 10/89 (11%)
Query: 264 EDQNYGIFLEMMEARSRGHASPLAANGQSPSPGSQSPVVPAGAVSTGSSS---PGTPQPA 320
E++++G+ + +S+ S L N S GS + T S P P
Sbjct: 1439 EEEDFGV-----KGKSKSACSDLLGNQPSSFSGSNLTLNDDWNKGTNVSFCVLPSRRPPP 1493
Query: 321 PQLPLNAAPPSSVPPVPPSEALPPPACPS 349
P +PL PP + PPV P L A P+
Sbjct: 1494 PPVPL--LPPGTSPPVDPFTTLASKASPT 1520
>gi|34147513 RAB7, member RAS oncogene family [Homo sapiens]
Length = 207
Score = 46.2 bits (108), Expect = 7e-05
Identities = 32/150 (21%), Positives = 62/150 (41%), Gaps = 32/150 (21%)
Query: 44 MKIVIRGDRNTGKTALWHRLQGRPFVEEYIPTQEIQVTSIHWSYKTTDDIVKVEVWDVVD 103
+K++I GD GKT+L ++ + F +Y T I + D +V +++WD
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKAT--IGADFLTKEVMVDDRLVTMQIWDTAG 66
Query: 104 KGKCKKRGDGLKMENDPQEAESEMALDAEFLDVYKNCNGVVMMFDIT--------KQWTF 155
+ + + G + Y+ + V++FD+T W
Sbjct: 67 QERFQSLG----------------------VAFYRGADCCVLVFDVTAPNTFKTLDSWRD 104
Query: 156 NYILRELPKVPTHVPVCVLGNYRDMGEHRV 185
++++ P+ P + P VLGN D+ +V
Sbjct: 105 EFLIQASPRDPENFPFVVLGNKIDLENRQV 134
>gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo
sapiens]
Length = 505
Score = 45.8 bits (107), Expect = 9e-05
Identities = 31/89 (34%), Positives = 37/89 (41%), Gaps = 2/89 (2%)
Query: 277 ARSRGHASPLAANGQSPSPGSQSPVVPAGAVSTGSSSPGTPQPAPQLPLNAAPPSSVPPV 336
AR RG P + + +P P P+ AV + P P P LP +A PS PP
Sbjct: 304 ARGRGAPPPPPSRAPTAAPPPPPPSRPSVAVPPPPPNRMYPPPPPALPSSA--PSGPPPP 361
Query: 337 PPSEALPPPACPSAPAPRRSIISRPPPWG 365
PPS P P P P PPP G
Sbjct: 362 PPSVLGVGPVAPPPPPPPPPPPGPPPPPG 390
Score = 40.8 bits (94), Expect = 0.003
Identities = 38/128 (29%), Positives = 46/128 (35%), Gaps = 11/128 (8%)
Query: 246 NQLDMDATLEELSVQQETEDQNYGIF-----LEMMEARSRGHASPLAANGQSPSPGSQSP 300
N DM E +ET Y +E ++ R A P + P P
Sbjct: 234 NLFDMCGISEAQLKDRETSKVIYDFIEKTGGVEAVKNELRRQAPPPPPPSRGGPPPPPPP 293
Query: 301 VVPAGAVSTGSSSPGTPQPAPQLPLNAAPPSSVPPVPPSEALPPPA-----CPSAPAPRR 355
+G + G P P P AAPP PP PS A+PPP P PA
Sbjct: 294 PHNSGPPPPPARGRGAPPPPPSRAPTAAPPPP-PPSRPSVAVPPPPPNRMYPPPPPALPS 352
Query: 356 SIISRPPP 363
S S PPP
Sbjct: 353 SAPSGPPP 360
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 45.8 bits (107), Expect = 9e-05
Identities = 28/77 (36%), Positives = 35/77 (45%), Gaps = 9/77 (11%)
Query: 293 PSPGSQSPVVPAGAVSTGSSSPGTPQPAPQLPLNAAPPSSVPPVPPSE------ALPPPA 346
PSP Q+P P + SP P+ P AAPP VPP PP+ A PPP
Sbjct: 444 PSPPVQAPFSPPASPPV---SPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQ 500
Query: 347 CPSAPAPRRSIISRPPP 363
P A +++PPP
Sbjct: 501 APPPLAAPPLQLAKPPP 517
Score = 40.4 bits (93), Expect = 0.004
Identities = 34/109 (31%), Positives = 47/109 (43%), Gaps = 23/109 (21%)
Query: 272 LEMMEARSRGHASPLAANGQSPSPGS---------QSPVVPAGAVSTGSSSPGTPQPAPQ 322
L ++A ASP + +PSP + Q+P P S +P +P +P
Sbjct: 402 LPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPP--SPPVQAPFSPPASPP 459
Query: 323 LPLNAAPPSSVPP--------VPPSEALPPPACPSAPAPRRSIISRPPP 363
+ +A PPS PP VPPS PP PSA P ++ PPP
Sbjct: 460 VSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQA----PPP 504
Score = 38.5 bits (88), Expect = 0.015
Identities = 29/83 (34%), Positives = 35/83 (42%), Gaps = 4/83 (4%)
Query: 284 SPLAANGQSPSPGSQSPVVPAGAVSTGSSSPGTPQPAPQLPLNAAPPSSVPPV--PPSE- 340
SP A+ SPS S P+ A P P P P PP + PP+ PP +
Sbjct: 453 SPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQL 512
Query: 341 ALPPPACPSAPA-PRRSIISRPP 362
A PPP P A A P + PP
Sbjct: 513 AKPPPQAPPALATPPLQALPSPP 535
Score = 36.6 bits (83), Expect = 0.057
Identities = 36/98 (36%), Positives = 46/98 (46%), Gaps = 21/98 (21%)
Query: 283 ASPLAANGQSPSPGSQS-PVVPAGAVSTGSSSPGTPQPAPQLPL----NAAPPS-----S 332
+SPLA S + SQ+ P +PA T SS T Q A LPL +APPS S
Sbjct: 301 SSPLATPSPSAALQSQAPPTLPA----TPHSSSLTCQLATPLPLAPPSPSAPPSLQTLPS 356
Query: 333 VPPVPPSEALPPPACPS-------APAPRRSIISRPPP 363
P PPS+A P+ P+P S ++ PPP
Sbjct: 357 PPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPP 394
Score = 36.2 bits (82), Expect = 0.075
Identities = 34/106 (32%), Positives = 42/106 (39%), Gaps = 27/106 (25%)
Query: 285 PLAANGQSPSPGSQS-PVVPAGAVSTGSSSPGTPQ--------PAPQLPLNAAPPSSVPP 335
PLA S P Q+ P PA S ++S G+P P+P L A PP PP
Sbjct: 339 PLAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPP 398
Query: 336 ---VPPSEALPPP---------ACPSAPAPRRSIIS------RPPP 363
+PP +A P P A PS AP + PPP
Sbjct: 399 ALALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPP 444
Score = 35.8 bits (81), Expect = 0.097
Identities = 28/76 (36%), Positives = 35/76 (46%), Gaps = 7/76 (9%)
Query: 285 PLAANGQSPS--PGSQSPVVPAGAVSTGSSSPGTPQPAPQLPLNAAPPSSVPPVPP-SEA 341
PL A P+ PG Q+P P+ ++ + PQ P L AAP VPP PP S
Sbjct: 527 PLQALPSPPASFPG-QAPFSPSASLPMSPLATPPPQAPPVL---AAPLLQVPPSPPASPT 582
Query: 342 LPPPACPSAPAPRRSI 357
L P P P P S+
Sbjct: 583 LQAPRRPPTPGPDTSV 598
Score = 34.3 bits (77), Expect = 0.28
Identities = 33/91 (36%), Positives = 39/91 (42%), Gaps = 26/91 (28%)
Query: 285 PLAANG-QSPSPGSQSPVVPAGAVSTGSSSPGTP---------QPAPQLPLN--AAPPSS 332
PLAA Q P Q+P PA A + P P P+ LP++ A PP
Sbjct: 504 PLAAPPLQLAKPPPQAP--PALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQ 561
Query: 333 VPP--------VPPSEALPPPACPSAPAPRR 355
PP VPPS PPA P+ APRR
Sbjct: 562 APPVLAAPLLQVPPS----PPASPTLQAPRR 588
Score = 32.3 bits (72), Expect = 1.1
Identities = 30/95 (31%), Positives = 37/95 (38%), Gaps = 16/95 (16%)
Query: 284 SPLAANGQSPS---PGSQSPVVPAGAVSTGSSSPGTPQPAPQLPLNA--APPSSVP---P 335
SP A+ SPS P P + A + P P PL A +PP+S P P
Sbjct: 484 SPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFPGQAP 543
Query: 336 VPPSEALP--------PPACPSAPAPRRSIISRPP 362
PS +LP P A P AP + PP
Sbjct: 544 FSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPP 578
Score = 30.8 bits (68), Expect = 3.1
Identities = 27/96 (28%), Positives = 32/96 (33%), Gaps = 7/96 (7%)
Query: 288 ANGQSPSPGSQSPVVPAGAVSTGSSSPGTPQPAPQLPLNAAPPSSVPPVPPSEALPPPAC 347
A G P P +G G SS T P ++ P PP +A
Sbjct: 608 APGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACH 667
Query: 348 PSAPAPRRSIISRPPPWGWRLRGALGRRGQWPPWGG 383
P+A SR P RGA G WPP G
Sbjct: 668 PAA-------WSRGPAPPLAFRGAPGAPLPWPPATG 696
Score = 30.4 bits (67), Expect = 4.1
Identities = 22/77 (28%), Positives = 29/77 (37%), Gaps = 3/77 (3%)
Query: 283 ASPLAANGQSPSPGSQSPVVPAGAVSTGSSSPGTPQPAPQLPLNAAPPSSVPPVPPSEAL 342
A A G++ +S + T +PGTP PA AA P P A
Sbjct: 138 AEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSAR 197
Query: 343 PPPACPSAPAPRRSIIS 359
P P PR+S+ S
Sbjct: 198 PR---PPTEGPRKSVSS 211
Score = 29.6 bits (65), Expect = 7.0
Identities = 27/89 (30%), Positives = 37/89 (41%), Gaps = 13/89 (14%)
Query: 287 AANGQSPSPGSQSPVVPAGAVSTGSSSP----------GTPQPAPQLPLNAAPPSSVPPV 336
+A + P+ G + V A ST SP G +PA + ++A P S P
Sbjct: 195 SARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPAR 254
Query: 337 --PPSEALP-PPACPSAPAPRRSIISRPP 362
P + P PA PS P P+ RPP
Sbjct: 255 SGPSARGTPRAPAHPSQPKPKGLQALRPP 283
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 45.8 bits (107), Expect = 9e-05
Identities = 28/77 (36%), Positives = 35/77 (45%), Gaps = 9/77 (11%)
Query: 293 PSPGSQSPVVPAGAVSTGSSSPGTPQPAPQLPLNAAPPSSVPPVPPSE------ALPPPA 346
PSP Q+P P + SP P+ P AAPP VPP PP+ A PPP
Sbjct: 405 PSPPVQAPFSPPASPPV---SPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQ 461
Query: 347 CPSAPAPRRSIISRPPP 363
P A +++PPP
Sbjct: 462 APPPLAAPPLQLAKPPP 478
Score = 40.4 bits (93), Expect = 0.004
Identities = 34/109 (31%), Positives = 47/109 (43%), Gaps = 23/109 (21%)
Query: 272 LEMMEARSRGHASPLAANGQSPSPGS---------QSPVVPAGAVSTGSSSPGTPQPAPQ 322
L ++A ASP + +PSP + Q+P P S +P +P +P
Sbjct: 363 LPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPP--SPPVQAPFSPPASPP 420
Query: 323 LPLNAAPPSSVPP--------VPPSEALPPPACPSAPAPRRSIISRPPP 363
+ +A PPS PP VPPS PP PSA P ++ PPP
Sbjct: 421 VSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQA----PPP 465
Score = 38.5 bits (88), Expect = 0.015
Identities = 29/83 (34%), Positives = 35/83 (42%), Gaps = 4/83 (4%)
Query: 284 SPLAANGQSPSPGSQSPVVPAGAVSTGSSSPGTPQPAPQLPLNAAPPSSVPPV--PPSE- 340
SP A+ SPS S P+ A P P P P PP + PP+ PP +
Sbjct: 414 SPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQL 473
Query: 341 ALPPPACPSAPA-PRRSIISRPP 362
A PPP P A A P + PP
Sbjct: 474 AKPPPQAPPALATPPLQALPSPP 496
Score = 35.8 bits (81), Expect = 0.097
Identities = 28/76 (36%), Positives = 35/76 (46%), Gaps = 7/76 (9%)
Query: 285 PLAANGQSPS--PGSQSPVVPAGAVSTGSSSPGTPQPAPQLPLNAAPPSSVPPVPP-SEA 341
PL A P+ PG Q+P P+ ++ + PQ P L AAP VPP PP S
Sbjct: 488 PLQALPSPPASFPG-QAPFSPSASLPMSPLATPPPQAPPVL---AAPLLQVPPSPPASPT 543
Query: 342 LPPPACPSAPAPRRSI 357
L P P P P S+
Sbjct: 544 LQAPRRPPTPGPDTSV 559
Score = 35.4 bits (80), Expect = 0.13
Identities = 34/107 (31%), Positives = 42/107 (39%), Gaps = 27/107 (25%)
Query: 284 SPLAANGQSPSPGSQS-PVVPAGAVSTGSSSPGTPQ--------PAPQLPLNAAPPSSVP 334
SP A S P Q+ P PA S ++S G+P P+P L A PP P
Sbjct: 299 SPSAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAP 358
Query: 335 P---VPPSEALPPP---------ACPSAPAPRRSIIS------RPPP 363
P +PP +A P P A PS AP + PPP
Sbjct: 359 PALALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPP 405
Score = 34.3 bits (77), Expect = 0.28
Identities = 33/91 (36%), Positives = 39/91 (42%), Gaps = 26/91 (28%)
Query: 285 PLAANG-QSPSPGSQSPVVPAGAVSTGSSSPGTP---------QPAPQLPLN--AAPPSS 332
PLAA Q P Q+P PA A + P P P+ LP++ A PP
Sbjct: 465 PLAAPPLQLAKPPPQAP--PALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQ 522
Query: 333 VPP--------VPPSEALPPPACPSAPAPRR 355
PP VPPS PPA P+ APRR
Sbjct: 523 APPVLAAPLLQVPPS----PPASPTLQAPRR 549
Score = 32.3 bits (72), Expect = 1.1
Identities = 30/95 (31%), Positives = 37/95 (38%), Gaps = 16/95 (16%)
Query: 284 SPLAANGQSPS---PGSQSPVVPAGAVSTGSSSPGTPQPAPQLPLNA--APPSSVP---P 335
SP A+ SPS P P + A + P P PL A +PP+S P P
Sbjct: 445 SPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFPGQAP 504
Query: 336 VPPSEALP--------PPACPSAPAPRRSIISRPP 362
PS +LP P A P AP + PP
Sbjct: 505 FSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPP 539
Score = 30.8 bits (68), Expect = 3.1
Identities = 27/96 (28%), Positives = 32/96 (33%), Gaps = 7/96 (7%)
Query: 288 ANGQSPSPGSQSPVVPAGAVSTGSSSPGTPQPAPQLPLNAAPPSSVPPVPPSEALPPPAC 347
A G P P +G G SS T P ++ P PP +A
Sbjct: 569 APGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACH 628
Query: 348 PSAPAPRRSIISRPPPWGWRLRGALGRRGQWPPWGG 383
P+A SR P RGA G WPP G
Sbjct: 629 PAA-------WSRGPAPPLAFRGAPGAPLPWPPATG 657
Score = 30.4 bits (67), Expect = 4.1
Identities = 22/77 (28%), Positives = 29/77 (37%), Gaps = 3/77 (3%)
Query: 283 ASPLAANGQSPSPGSQSPVVPAGAVSTGSSSPGTPQPAPQLPLNAAPPSSVPPVPPSEAL 342
A A G++ +S + T +PGTP PA AA P P A
Sbjct: 129 AEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSAR 188
Query: 343 PPPACPSAPAPRRSIIS 359
P P PR+S+ S
Sbjct: 189 PR---PPTEGPRKSVSS 202
Score = 30.0 bits (66), Expect = 5.3
Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Query: 287 AANGQSPSPGSQSPVVPAG--AVSTGSSSPGTPQPAPQL-PLNAAPPSSVPPVPPSEALP 343
+A G +P S P G A+ +P AP L PL+++P ++ P P
Sbjct: 249 SARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAPPSPSA 308
Query: 344 PPACPSAPAP 353
PP+ + P+P
Sbjct: 309 PPSLQTLPSP 318
Score = 30.0 bits (66), Expect = 5.3
Identities = 28/102 (27%), Positives = 42/102 (41%), Gaps = 17/102 (16%)
Query: 278 RSRGHASPLAANG-QSPSPGSQSPVVPAGAVSTG--SSSPGTPQPAPQLPLNAAPPSSVP 334
R+ H S G Q+ P +P A + G SSSP P+P P + + P S+
Sbjct: 255 RAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSP-LATPSPSAPPSPSAPPSLQ 313
Query: 335 PVPPSEALPPPACPSA-------------PAPRRSIISRPPP 363
+P A PP ++ P+P S ++ PPP
Sbjct: 314 TLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPP 355
>gi|4758996 Ras-related protein Rab-33A [Homo sapiens]
Length = 237
Score = 45.8 bits (107), Expect = 9e-05
Identities = 44/169 (26%), Positives = 72/169 (42%), Gaps = 37/169 (21%)
Query: 23 AGLQSMNQALQRRFAKGVQYNM-KIVIRGDRNTGKTALWHRLQGRPFVEEYIPTQEIQVT 81
AGL S+ L + VQ + KI++ GD N GKT L R G F P +
Sbjct: 17 AGLASLE--LDSSLDQYVQIRIFKIIVIGDSNVGKTCLTFRFCGGTF-----PDKTEATI 69
Query: 82 SIHWSYKTTD---DIVKVEVWDVVDKGKCKKRGDGLKMENDPQEAESEMALDAEFLDVYK 138
+ + KT + + +KV+VWD + + +K + Y+
Sbjct: 70 GVDFREKTVEIEGEKIKVQVWDTAGQERFRK---------------------SMVEHYYR 108
Query: 139 NCNGVVMMFDITKQWTFNYILRELPK-----VPTHVPVCVLGNYRDMGE 182
N + VV ++D+TK +F + + + VP VP ++GN D+ E
Sbjct: 109 NVHAVVFVYDVTKMTSFTNLKMWIQECNGHAVPPLVPKVLVGNKCDLRE 157
>gi|33356148 formin-like 1 [Homo sapiens]
Length = 1100
Score = 45.8 bits (107), Expect = 9e-05
Identities = 37/109 (33%), Positives = 42/109 (38%), Gaps = 24/109 (22%)
Query: 281 GHASPLAANGQSPSPGSQSPV------------VPAGAVSTGSSSPGTPQP--APQLPLN 326
G SP A P+PG+ P P A PG+P+P AP LP +
Sbjct: 524 GSPSPDLAPAAEPAPGAAPPPPPPLPGLPSPQEAPPSAPPQAPPLPGSPEPPPAPPLPGD 583
Query: 327 AAPPSSVPPVPPSEALPPPACPSAPAPRRSIISRPPPWGWRLRGALGRR 375
PP PP PP P P P P PPP G ALGRR
Sbjct: 584 LPPPPPPPPPPPGTDGPVPPPPPPPP--------PPPGG--PPDALGRR 622
Score = 44.7 bits (104), Expect = 2e-04
Identities = 29/81 (35%), Positives = 37/81 (45%), Gaps = 7/81 (8%)
Query: 288 ANGQSPSPG----SQSPVVPAGAVSTGSSSPGTPQPAPQLPL-NAAPPSSVPPVPPSEAL 342
+ G +P+PG S SP + A ++P P P P LP APPS+ P PP
Sbjct: 512 SGGDAPTPGVPTGSPSPDLAPAAEPAPGAAPPPPPPLPGLPSPQEAPPSAPPQAPPLPGS 571
Query: 343 PPPACPSAPAPRRSIISRPPP 363
P P P AP + PPP
Sbjct: 572 PEP--PPAPPLPGDLPPPPPP 590
Score = 36.6 bits (83), Expect = 0.057
Identities = 29/72 (40%), Positives = 34/72 (47%), Gaps = 8/72 (11%)
Query: 300 PVVPAGAVSTGSSSPGTP--QPAPQLPLNA--APPSSVPPVPPSEALPPP--ACPSAP-- 351
PV A + +PG P P+P L A AP ++ PP PP LP P A PSAP
Sbjct: 505 PVAVATPSGGDAPTPGVPTGSPSPDLAPAAEPAPGAAPPPPPPLPGLPSPQEAPPSAPPQ 564
Query: 352 APRRSIISRPPP 363
AP PPP
Sbjct: 565 APPLPGSPEPPP 576
Score = 29.3 bits (64), Expect = 9.1
Identities = 41/187 (21%), Positives = 61/187 (32%), Gaps = 46/187 (24%)
Query: 222 YLHKFFNIPFLQLQRET---LLRQLETNQLDM--------DATLEELSVQQETEDQNYGI 270
YL F++ L ET +L +E Q + DA E ++ E E Q
Sbjct: 377 YLDNIFDVGALLEDTETKNAVLEHMEELQEQVALLTERLRDAENESMAKIAELEKQLSQA 436
Query: 271 FLEMMEARSR-GHASPLAANGQSPSPGSQSPVVPAGAVSTGSS--------------SPG 315
E+ R R ++ + A+ + P P P P + PG
Sbjct: 437 RKELETLRERFSESTAMGASRRPPEPEKAPPAAPTRPSALELKVEELEEKGLIRILRGPG 496
Query: 316 TPQPAPQLPLNAAPPS--------------------SVPPVPPSEALPPPACPSAPAPRR 355
LP+ A PS + P P + PPP P P+P+
Sbjct: 497 DAVSIEILPVAVATPSGGDAPTPGVPTGSPSPDLAPAAEPAPGAAPPPPPPLPGLPSPQE 556
Query: 356 SIISRPP 362
+ S PP
Sbjct: 557 APPSAPP 563
>gi|7661922 RAB21, member RAS oncogene family [Homo sapiens]
Length = 225
Score = 45.4 bits (106), Expect = 1e-04
Identities = 47/217 (21%), Positives = 96/217 (44%), Gaps = 46/217 (21%)
Query: 37 AKGVQYNMKIVIRGDRNTGKTALWHRLQGRPFVEEYIPTQEIQVTSIHWSYKTTDDIVKV 96
A G Y+ K+V+ G+ GKT+L R F +++I T +Q + + V +
Sbjct: 13 AAGRAYSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITT--LQASFLTKKLNIGGKRVNL 70
Query: 97 EVWDVVDKGKCKKRGDGLKMENDPQEAESEMALDAEFLDVYKNCNGVVMMFDITKQWTFN 156
+WD + + G Y++ NG ++++DIT + +F
Sbjct: 71 AIWDTAGQERFHALGP----------------------IYYRDSNGAILVYDITDEDSFQ 108
Query: 157 YI---LRELPK-VPTHVPVCVLGNYRDMGEHRVILPDDVRDFIDNLDRPPGSSYFRYAES 212
+ ++EL K + + +C++GN D+ + R + + + +++ G+ ++ +
Sbjct: 109 KVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAESYAESV----GAKHY---HT 161
Query: 213 SMKNSFGLKYLHKFFNIPFLQLQRETLLRQLETNQLD 249
S K + G++ L FL L + R +ET Q+D
Sbjct: 162 SAKQNKGIEEL-------FLDLCK----RMIETAQVD 187
>gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens]
Length = 1682
Score = 45.1 bits (105), Expect = 2e-04
Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 7/76 (9%)
Query: 288 ANGQSPSPGSQSPVVPAGAVSTGSSSPGTPQPAPQLPLNAAPPSSVPPVPPSEALPPPAC 347
A+ QSP P +P A AV+ +++ T PP ++PP PP PPP+
Sbjct: 730 ASLQSPFPTDTAPTTTAPAVAVTTTTTTTTTTTATQEEEKKPPPALPPPPPLAKFPPPSQ 789
Query: 348 PSAPAPRRSIISRPPP 363
P P P PPP
Sbjct: 790 PQPPPP-------PPP 798
Score = 37.0 bits (84), Expect = 0.044
Identities = 33/104 (31%), Positives = 41/104 (39%), Gaps = 22/104 (21%)
Query: 285 PLAANGQSPSPGSQSPVVPAGAVSTGSSS------PGTPQPAPQLPLNAAPPSSVPPVPP 338
P A +G P + + P G G +S PG P P P LP PP PP PP
Sbjct: 211 PAALSG----PSGEEGLSPGGKRRRGCNSEQTGLPPGLPLPPPPLP---PPP---PPPPP 260
Query: 339 SEALPPPACPSAPAPRRSIISRPPPWGWRLRGALG--RRGQWPP 380
PPP P +++P W A G R+G PP
Sbjct: 261 ----PPPPLPGLATSPPFQLTKPGLWSTLHGDAWGPERKGSAPP 300
Score = 33.1 bits (74), Expect = 0.63
Identities = 31/95 (32%), Positives = 38/95 (40%), Gaps = 17/95 (17%)
Query: 279 SRGHASPLAANGQSPSPG---SQSPVVPAGAVS----TGSSSPGTPQPAPQLPLNAAPPS 331
S +S G P+PG + PA VS G S+ + +P P A P
Sbjct: 401 SSSSSSNTGLRGVEPNPGIPGADHYQTPALEVSHHGRLGPSAHSSRKPFLGAPA-ATPHL 459
Query: 332 SVPPVPPSEALPPPACPSAPAPRRSIISRPPPWGW 366
S+PP P S PPP CP P PPP W
Sbjct: 460 SLPPGPSSP--PPPPCPRLLRP-------PPPPAW 485
Score = 30.8 bits (68), Expect = 3.1
Identities = 18/54 (33%), Positives = 21/54 (38%), Gaps = 1/54 (1%)
Query: 283 ASPLAANGQSPSPGSQSPVVPAGAVSTGSSSPGT-PQPAPQLPLNAAPPSSVPP 335
A+P A PS S S +G G P P P P PP S+PP
Sbjct: 853 AAPSAQGSPQPSASSSSQFSTSGGPWARERRAGEEPVPGPMTPTQPPPPLSLPP 906
Score = 30.4 bits (67), Expect = 4.1
Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Query: 309 TGSSSPGTPQPAPQLPLNAAPPSSVPPVPPSEALPPPACPSAPAPRRSIISR 360
TG++ P P P + PPS +PP+ A P+ +P P S S+
Sbjct: 821 TGAAVSTRPGPLPTTQYSPGPPSGATALPPTSA--APSAQGSPQPSASSSSQ 870
Score = 30.4 bits (67), Expect = 4.1
Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 12/70 (17%)
Query: 310 GSSSPGTPQPAPQLPLNAAPPSSVPPVPPSEALP----------PPACPSAPAPRRSIIS 359
G +S P AP P +AP S P PPS ++P PP A + +S
Sbjct: 1039 GGASKAKPPTAPAPP--SAPAPSAQPTPPSASVPGKKAREEAPGPPGVSRADMLKLRSLS 1096
Query: 360 RPPPWGWRLR 369
PP ++R
Sbjct: 1097 EGPPKELKIR 1106
Score = 30.0 bits (66), Expect = 5.3
Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 11/76 (14%)
Query: 275 MEARSRGHASPLAANGQSPSPGSQSPVVPAGAVSTGSSSPGTPQPAPQLPLNAAPPSSVP 334
+E G P A + + P G+ + P ++ G SSP P P P+L +
Sbjct: 430 LEVSHHGRLGPSAHSSRKPFLGAPA-ATPHLSLPPGPSSP-PPPPCPRL---------LR 478
Query: 335 PVPPSEALPPPACPSA 350
P PP L PAC +A
Sbjct: 479 PPPPPAWLKGPACRAA 494
>gi|6382071 diaphanous 2 isoform 12C [Homo sapiens]
Length = 1096
Score = 45.1 bits (105), Expect = 2e-04
Identities = 39/130 (30%), Positives = 54/130 (41%), Gaps = 17/130 (13%)
Query: 255 EELSVQQET--EDQNYGIFLEMMEA---RSRGHASPLAANGQSPSPGSQSPVVPAGAVST 309
EE + +QE E Q ++ +EA + R A L+++ P P + P+ G
Sbjct: 506 EEFTARQEAQAELQKRDEKIKELEAEIQQLRTQAQVLSSSSGIPGPPAAPPLPGVG---- 561
Query: 310 GSSSPGTPQPAPQLPLNAAPPSSVPPVPPSEALPPPACP----SAPAPRRSIISRPPPWG 365
P P PAP LP A P PP+P +PPP P P P + PPP G
Sbjct: 562 ----PPPPPPAPPLPGGAPLPPPPPPLPGMMGIPPPPPPPLLFGGPPPPPPLGGVPPPPG 617
Query: 366 WRLRGALGRR 375
L G +
Sbjct: 618 ISLNLPYGMK 627
>gi|5803003 diaphanous 2 isoform 156 [Homo sapiens]
Length = 1101
Score = 45.1 bits (105), Expect = 2e-04
Identities = 39/130 (30%), Positives = 54/130 (41%), Gaps = 17/130 (13%)
Query: 255 EELSVQQET--EDQNYGIFLEMMEA---RSRGHASPLAANGQSPSPGSQSPVVPAGAVST 309
EE + +QE E Q ++ +EA + R A L+++ P P + P+ G
Sbjct: 506 EEFTARQEAQAELQKRDEKIKELEAEIQQLRTQAQVLSSSSGIPGPPAAPPLPGVG---- 561
Query: 310 GSSSPGTPQPAPQLPLNAAPPSSVPPVPPSEALPPPACP----SAPAPRRSIISRPPPWG 365
P P PAP LP A P PP+P +PPP P P P + PPP G
Sbjct: 562 ----PPPPPPAPPLPGGAPLPPPPPPLPGMMGIPPPPPPPLLFGGPPPPPPLGGVPPPPG 617
Query: 366 WRLRGALGRR 375
L G +
Sbjct: 618 ISLNLPYGMK 627
>gi|115298682 HBxAg transactivated protein 2 [Homo sapiens]
Length = 2817
Score = 45.1 bits (105), Expect = 2e-04
Identities = 31/90 (34%), Positives = 42/90 (46%), Gaps = 6/90 (6%)
Query: 274 MMEARSRGHASPLAANGQSPSPGSQSPVVPAGAVSTGSSSPGTPQPAPQLPLNAAPPSSV 333
+ +A+S PLA+ +P P S S VPA ST + P T P P P S++
Sbjct: 1737 IQQAQSSASVPPLAS---APLPPSTSASVPA---STSAPLPATLTPVPASTSAPVPASTL 1790
Query: 334 PPVPPSEALPPPACPSAPAPRRSIISRPPP 363
PV S + P PA P AP + +S P
Sbjct: 1791 APVLASTSAPVPASPLAPVSASASVSASVP 1820
Score = 41.2 bits (95), Expect = 0.002
Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 8/86 (9%)
Query: 284 SPLAANGQSPSPGS--QSPVVPAGAVSTGSSSPGTPQPAPQLPLNAAPPSSVPPVP---P 338
+P+ A+ +P+ + S +P A + S+S TP PA P AAP + P +P P
Sbjct: 1841 TPILASVSTPASVTILASASIPILASALASTSAPTPAPAASSP--AAPVITAPTIPASAP 1898
Query: 339 SEALP-PPACPSAPAPRRSIISRPPP 363
+ ++P PA SAPAP + +S P P
Sbjct: 1899 TASVPLAPASASAPAPAPTPVSAPNP 1924
Score = 36.6 bits (83), Expect = 0.057
Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 283 ASPLAA-NGQSPSPGSQSPVVPAGAVSTGSSSPGTPQPAPQLPLNAAPPSSVPPVPPSEA 341
AS LA+ + +P+P + SP P V T + P + P +PL A S+ P P +
Sbjct: 1865 ASALASTSAPTPAPAASSPAAP---VITAPTIPASA-PTASVPLAPASASAPAPAPTPVS 1920
Query: 342 LPPPACPSAPAPRRSIISRP 361
P PA P APA ++ +P
Sbjct: 1921 APNPA-PPAPAQTQAQTHKP 1939
Score = 35.0 bits (79), Expect = 0.17
Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 5/85 (5%)
Query: 283 ASPLAANGQSPSPGSQSPVVPAGAVSTGSSSPGTPQPA-PQLPLNAAP--PSSVPPVPPS 339
++PL A +P P S S VPA ++ +S P PA P P++A+ +SVP +
Sbjct: 1767 SAPLPAT-LTPVPASTSAPVPASTLAPVLASTSAPVPASPLAPVSASASVSASVPASTSA 1825
Query: 340 EALPPPACP-SAPAPRRSIISRPPP 363
A+ + P SAPAP + S P
Sbjct: 1826 AAITSSSAPASAPAPTPILASVSTP 1850
Score = 33.5 bits (75), Expect = 0.48
Identities = 26/124 (20%), Positives = 45/124 (36%), Gaps = 10/124 (8%)
Query: 232 LQLQRETLLRQLETNQLDMDATLEELSVQQETEDQNYGIFLEMMEARSRGHASPLAANGQ 291
L+ +RE L ++E + +++ +E+ + + +F RS A+P+ +
Sbjct: 589 LEKEREKLEEKIEPREPNLEPMVEKQESENSCNKEEEPVFTRQDSNRSEKEATPVVHETE 648
Query: 292 SPSPGSQSPVVPAGAVSTGSSS----------PGTPQPAPQLPLNAAPPSSVPPVPPSEA 341
S P V +G S Q Q P +VP P S
Sbjct: 649 PESGSQPRPAVLSGYFKQFQKSLPPRFQRQQEQMKQQQWQQQQQQGVLPQTVPSQPSSST 708
Query: 342 LPPP 345
+PPP
Sbjct: 709 VPPP 712
Score = 30.4 bits (67), Expect = 4.1
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 284 SPLAANGQSPSPGSQSPVVPAGAVSTGSSSPGTPQPAPQLPLNAAPPSSVPPVPPSEALP 343
+P+ A+ +P P S P+ P A ++ S+S A + ++AP S+ P P ++
Sbjct: 1791 APVLASTSAPVPAS--PLAPVSASASVSASVPASTSAAAITSSSAPASAPAPTPILASVS 1848
Query: 344 PPA 346
PA
Sbjct: 1849 TPA 1851
Score = 30.0 bits (66), Expect = 5.3
Identities = 23/77 (29%), Positives = 31/77 (40%), Gaps = 7/77 (9%)
Query: 288 ANGQSPSPGSQSPVVPAGAVSTGSSSPGTPQPAPQLPLNAAPPSSVPPVP-------PSE 340
AN + S S+ P A +TG + P L PPS+ VP P+
Sbjct: 1714 ANEKGRSQTSKLPPRFAKKQATGIQQAQSSASVPPLASAPLPPSTSASVPASTSAPLPAT 1773
Query: 341 ALPPPACPSAPAPRRSI 357
P PA SAP P ++
Sbjct: 1774 LTPVPASTSAPVPASTL 1790
>gi|189181724 proteoglycan 4 isoform D [Homo sapiens]
Length = 1270
Score = 44.7 bits (104), Expect = 2e-04
Identities = 24/77 (31%), Positives = 31/77 (40%), Gaps = 5/77 (6%)
Query: 285 PLAANGQSPSPGSQSPVVPAGAVSTGSSSPGTPQPAPQLPLNAAPPSSVPPVPPSEALPP 344
P + P+P +P G ST S +PAP P AP + P P + P
Sbjct: 655 PAPTTPKKPAPKELAPTTTKGPTSTTSD-----KPAPTTPKETAPTTPKEPAPTTPKKPA 709
Query: 345 PACPSAPAPRRSIISRP 361
P P P P S +S P
Sbjct: 710 PTTPETPPPTTSEVSTP 726
Score = 40.8 bits (94), Expect = 0.003
Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 5/70 (7%)
Query: 285 PLAANGQSPSPGSQSPVVPAGAVSTGSSSPGTP-QPAPQLPLNAAPPSSVPPVPPSEALP 343
P + P+P + P +T S+P TP +PAP P AP + P P + P
Sbjct: 270 PAPTTPKEPAPTTTKEPAP----TTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEP 325
Query: 344 PPACPSAPAP 353
P P PAP
Sbjct: 326 TPTTPKEPAP 335
Score = 38.9 bits (89), Expect = 0.012
Identities = 20/62 (32%), Positives = 25/62 (40%), Gaps = 2/62 (3%)
Query: 294 SPGSQSPVVPAGAVSTGSSSPG--TPQPAPQLPLNAAPPSSVPPVPPSEALPPPACPSAP 351
+P +P P T P T +PAP P AP + P P + P P P P
Sbjct: 313 TPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEP 372
Query: 352 AP 353
AP
Sbjct: 373 AP 374
Score = 38.1 bits (87), Expect = 0.020
Identities = 26/90 (28%), Positives = 36/90 (40%), Gaps = 12/90 (13%)
Query: 284 SPLAANGQSPSPGSQSPVVPAG-AVSTGSSSPGTP---------QPAPQLPLNAAPPSSV 333
SP +P+ +P A +T S+P TP +PAP P AP +
Sbjct: 381 SPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPK 440
Query: 334 PPVPPSEALPPPACPSAPAPRRSIISRPPP 363
P P + P P P PAP + +P P
Sbjct: 441 KPAPTTPKEPAPTTPKEPAP--TTTKKPAP 468
Score = 38.1 bits (87), Expect = 0.020
Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
Query: 291 QSPSPGSQSPVVPAGAVSTGSSSPGTPQ-PAPQLPLNAAPPSSVPPVPPSEALPPPACPS 349
+ P+P + + P + +P TP+ PAP P AAP + P P + P P P
Sbjct: 504 EKPAPTTPEELAPT---TPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPK 560
Query: 350 APAP 353
PAP
Sbjct: 561 EPAP 564
Score = 36.2 bits (82), Expect = 0.075
Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 3/69 (4%)
Query: 285 PLAANGQSPSPGSQSPVVPAGAVSTGSSSPGTPQPAPQLPLNAAPPSSVPPVPPSEALPP 344
P + P+P ++ P P ++P +PAP P AP + P P + P
Sbjct: 325 PTPTTPKEPAPTTKEPA-PTTPKEPAPTAP--KKPAPTTPKEPAPTTPKEPAPTTTKEPS 381
Query: 345 PACPSAPAP 353
P P PAP
Sbjct: 382 PTTPKEPAP 390
Score = 35.0 bits (79), Expect = 0.17
Identities = 21/73 (28%), Positives = 29/73 (39%), Gaps = 4/73 (5%)
Query: 284 SPLAANGQSPSPGSQSPVVPAGAVSTGSSSPG--TP-QPAPQLPLNAAPPSSVPPVPPSE 340
+P +P+ +P P T P TP +PAP P P + P P ++
Sbjct: 279 APTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTK 338
Query: 341 ALPPPACPSAPAP 353
P P P PAP
Sbjct: 339 E-PAPTTPKEPAP 350
Score = 35.0 bits (79), Expect = 0.17
Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 6/76 (7%)
Query: 283 ASPLAANGQSPS----PGSQSPVVPAGAVSTGSSSPGTP-QPAPQLPLNAAPPSSVPPVP 337
++P SP+ P +P PA + +P TP +PAP P AP ++ P P
Sbjct: 410 SAPTTPKEPSPTTTKEPAPTTPKEPA-PTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAP 468
Query: 338 PSEALPPPACPSAPAP 353
+ P P P AP
Sbjct: 469 TTPKEPAPTTPKETAP 484
Score = 34.3 bits (77), Expect = 0.28
Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
Query: 295 PGSQSPVVPAGAVSTGSSSPGTPQPAPQLPLNAAPPSSVPPVPPSEALPPPACPSAPAP 353
P S +P P +T S+P TP+ +AP + P P + P P P PAP
Sbjct: 224 PASTTPKEPTP--TTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAP 280
Score = 34.3 bits (77), Expect = 0.28
Identities = 19/76 (25%), Positives = 28/76 (36%), Gaps = 6/76 (7%)
Query: 285 PLAANGQSPSPGSQSPVVPAGAVSTGSSSPGTP------QPAPQLPLNAAPPSSVPPVPP 338
P + P+P + P ++P P +PAP P AP + P
Sbjct: 522 PTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPT 581
Query: 339 SEALPPPACPSAPAPR 354
+ P P P PAP+
Sbjct: 582 TLKEPAPTTPKKPAPK 597
Score = 33.9 bits (76), Expect = 0.37
Identities = 22/81 (27%), Positives = 31/81 (38%), Gaps = 11/81 (13%)
Query: 285 PLAANGQSPSPGSQSPVVPAGAVSTG----------SSSPGTP-QPAPQLPLNAAPPSSV 333
P + P+P +P ST ++P TP +PAP P AP +
Sbjct: 586 PAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPK 645
Query: 334 PPVPPSEALPPPACPSAPAPR 354
P + P P P PAP+
Sbjct: 646 GTAPTTLKEPAPTTPKKPAPK 666
Score = 33.5 bits (75), Expect = 0.48
Identities = 27/90 (30%), Positives = 37/90 (41%), Gaps = 23/90 (25%)
Query: 285 PLAANGQSPSPGS--QSPVVPAG-AVSTGSSSPGTP---------QPAPQLPLNAAPPSS 332
P + + P+P + +P P A +T S+P TP +PAP P AP ++
Sbjct: 224 PASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTT 283
Query: 333 VPPVP---------PSEALPPPACPSAPAP 353
P P P E P P P PAP
Sbjct: 284 KEPAPTTTKSAPTTPKE--PAPTTPKKPAP 311
Score = 32.7 bits (73), Expect = 0.82
Identities = 22/62 (35%), Positives = 28/62 (45%), Gaps = 6/62 (9%)
Query: 295 PGSQSPVVPAGAVSTGSSSPGTP-QPAPQLPLNAAP--PSSVPPVPPSEALPPPACPSAP 351
P +P PA +T +P TP +PAP P AP P + P P + P P P
Sbjct: 450 PAPTTPKEPA-PTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKL--APTTPEKP 506
Query: 352 AP 353
AP
Sbjct: 507 AP 508
Score = 32.0 bits (71), Expect = 1.4
Identities = 23/65 (35%), Positives = 27/65 (41%), Gaps = 7/65 (10%)
Query: 294 SPGSQSPVVPAGAVSTGSS--SPGTPQ-PAPQLPLNAAP--PSSVPPVPPSEALPPPACP 348
+P +P P T +P TP+ PAP P AP P P P E P P P
Sbjct: 478 TPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEE--PAPTTP 535
Query: 349 SAPAP 353
A AP
Sbjct: 536 KAAAP 540
Score = 31.6 bits (70), Expect = 1.8
Identities = 22/65 (33%), Positives = 27/65 (41%), Gaps = 7/65 (10%)
Query: 294 SPGSQSPVVPAGAVSTGSS--SPGTPQP-APQLPLNAAP--PSSVPPVPPSEALPPPACP 348
+P +P P T +P TP+ AP P AP P + P P E P P P
Sbjct: 470 TPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEE--PTPTTP 527
Query: 349 SAPAP 353
PAP
Sbjct: 528 EEPAP 532
Score = 31.2 bits (69), Expect = 2.4
Identities = 19/63 (30%), Positives = 25/63 (39%), Gaps = 3/63 (4%)
Query: 294 SPGSQSPVVPAGAVSTGSS--SPGTPQ-PAPQLPLNAAPPSSVPPVPPSEALPPPACPSA 350
+P +P P T +P TP+ P P P AP + P + P P P
Sbjct: 494 TPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKE 553
Query: 351 PAP 353
PAP
Sbjct: 554 PAP 556
Score = 29.6 bits (65), Expect = 7.0
Identities = 26/89 (29%), Positives = 35/89 (39%), Gaps = 20/89 (22%)
Query: 284 SPLAANGQSPS----PGSQSPVVPAGAVSTGSSSPGTP-QPAPQLPLNA----------- 327
+P A +P+ P +P PA +T SP TP +PAP +A
Sbjct: 349 APTAPKKPAPTTPKEPAPTTPKEPA-PTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTT 407
Query: 328 ---APPSSVPPVPPSEALPPPACPSAPAP 353
AP + P P + P P P PAP
Sbjct: 408 TKSAPTTPKEPSPTTTKEPAPTTPKEPAP 436
Score = 29.3 bits (64), Expect = 9.1
Identities = 19/68 (27%), Positives = 23/68 (33%), Gaps = 8/68 (11%)
Query: 294 SPGSQSPVVPAGAVSTGSSSPGTPQPAPQLPLNAAP-----PSSVP---PVPPSEALPPP 345
+P +P P G T P P P AP P+S P P + P
Sbjct: 566 TPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGTAP 625
Query: 346 ACPSAPAP 353
P PAP
Sbjct: 626 TTPKEPAP 633
>gi|189181722 proteoglycan 4 isoform C [Homo sapiens]
Length = 1311
Score = 44.7 bits (104), Expect = 2e-04
Identities = 24/77 (31%), Positives = 31/77 (40%), Gaps = 5/77 (6%)
Query: 285 PLAANGQSPSPGSQSPVVPAGAVSTGSSSPGTPQPAPQLPLNAAPPSSVPPVPPSEALPP 344
P + P+P +P G ST S +PAP P AP + P P + P
Sbjct: 696 PAPTTPKKPAPKELAPTTTKGPTSTTSD-----KPAPTTPKETAPTTPKEPAPTTPKKPA 750
Query: 345 PACPSAPAPRRSIISRP 361
P P P P S +S P
Sbjct: 751 PTTPETPPPTTSEVSTP 767
Score = 40.8 bits (94), Expect = 0.003
Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 5/70 (7%)
Query: 285 PLAANGQSPSPGSQSPVVPAGAVSTGSSSPGTP-QPAPQLPLNAAPPSSVPPVPPSEALP 343
P + P+P + P +T S+P TP +PAP P AP + P P + P
Sbjct: 311 PAPTTPKEPAPTTTKEPAP----TTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEP 366
Query: 344 PPACPSAPAP 353
P P PAP
Sbjct: 367 TPTTPKEPAP 376
Score = 38.9 bits (89), Expect = 0.012
Identities = 20/62 (32%), Positives = 25/62 (40%), Gaps = 2/62 (3%)
Query: 294 SPGSQSPVVPAGAVSTGSSSPG--TPQPAPQLPLNAAPPSSVPPVPPSEALPPPACPSAP 351
+P +P P T P T +PAP P AP + P P + P P P P
Sbjct: 354 TPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEP 413
Query: 352 AP 353
AP
Sbjct: 414 AP 415
Score = 38.1 bits (87), Expect = 0.020
Identities = 26/90 (28%), Positives = 36/90 (40%), Gaps = 12/90 (13%)
Query: 284 SPLAANGQSPSPGSQSPVVPAG-AVSTGSSSPGTP---------QPAPQLPLNAAPPSSV 333
SP +P+ +P A +T S+P TP +PAP P AP +
Sbjct: 422 SPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPK 481
Query: 334 PPVPPSEALPPPACPSAPAPRRSIISRPPP 363
P P + P P P PAP + +P P
Sbjct: 482 KPAPTTPKEPAPTTPKEPAP--TTTKKPAP 509
Score = 38.1 bits (87), Expect = 0.020
Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
Query: 291 QSPSPGSQSPVVPAGAVSTGSSSPGTPQ-PAPQLPLNAAPPSSVPPVPPSEALPPPACPS 349
+ P+P + + P + +P TP+ PAP P AAP + P P + P P P
Sbjct: 545 EKPAPTTPEELAPT---TPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPK 601
Query: 350 APAP 353
PAP
Sbjct: 602 EPAP 605
Score = 36.2 bits (82), Expect = 0.075
Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 3/69 (4%)
Query: 285 PLAANGQSPSPGSQSPVVPAGAVSTGSSSPGTPQPAPQLPLNAAPPSSVPPVPPSEALPP 344
P + P+P ++ P P ++P +PAP P AP + P P + P
Sbjct: 366 PTPTTPKEPAPTTKEPA-PTTPKEPAPTAP--KKPAPTTPKEPAPTTPKEPAPTTTKEPS 422
Query: 345 PACPSAPAP 353
P P PAP
Sbjct: 423 PTTPKEPAP 431
Score = 35.0 bits (79), Expect = 0.17
Identities = 21/73 (28%), Positives = 29/73 (39%), Gaps = 4/73 (5%)
Query: 284 SPLAANGQSPSPGSQSPVVPAGAVSTGSSSPG--TP-QPAPQLPLNAAPPSSVPPVPPSE 340
+P +P+ +P P T P TP +PAP P P + P P ++
Sbjct: 320 APTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTK 379
Query: 341 ALPPPACPSAPAP 353
P P P PAP
Sbjct: 380 E-PAPTTPKEPAP 391
Score = 35.0 bits (79), Expect = 0.17
Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 6/76 (7%)
Query: 283 ASPLAANGQSPS----PGSQSPVVPAGAVSTGSSSPGTP-QPAPQLPLNAAPPSSVPPVP 337
++P SP+ P +P PA + +P TP +PAP P AP ++ P P
Sbjct: 451 SAPTTPKEPSPTTTKEPAPTTPKEPA-PTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAP 509
Query: 338 PSEALPPPACPSAPAP 353
+ P P P AP
Sbjct: 510 TTPKEPAPTTPKETAP 525
Score = 34.3 bits (77), Expect = 0.28
Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
Query: 295 PGSQSPVVPAGAVSTGSSSPGTPQPAPQLPLNAAPPSSVPPVPPSEALPPPACPSAPAP 353
P S +P P +T S+P TP+ +AP + P P + P P P PAP
Sbjct: 265 PASTTPKEPTP--TTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAP 321
Score = 34.3 bits (77), Expect = 0.28
Identities = 19/76 (25%), Positives = 28/76 (36%), Gaps = 6/76 (7%)
Query: 285 PLAANGQSPSPGSQSPVVPAGAVSTGSSSPGTP------QPAPQLPLNAAPPSSVPPVPP 338
P + P+P + P ++P P +PAP P AP + P
Sbjct: 563 PTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPT 622
Query: 339 SEALPPPACPSAPAPR 354
+ P P P PAP+
Sbjct: 623 TLKEPAPTTPKKPAPK 638
Score = 33.9 bits (76), Expect = 0.37
Identities = 22/81 (27%), Positives = 31/81 (38%), Gaps = 11/81 (13%)
Query: 285 PLAANGQSPSPGSQSPVVPAGAVSTG----------SSSPGTP-QPAPQLPLNAAPPSSV 333
P + P+P +P ST ++P TP +PAP P AP +
Sbjct: 627 PAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPK 686
Query: 334 PPVPPSEALPPPACPSAPAPR 354
P + P P P PAP+
Sbjct: 687 GTAPTTLKEPAPTTPKKPAPK 707
Score = 33.5 bits (75), Expect = 0.48
Identities = 27/90 (30%), Positives = 37/90 (41%), Gaps = 23/90 (25%)
Query: 285 PLAANGQSPSPGS--QSPVVPAG-AVSTGSSSPGTP---------QPAPQLPLNAAPPSS 332
P + + P+P + +P P A +T S+P TP +PAP P AP ++
Sbjct: 265 PASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTT 324
Query: 333 VPPVP---------PSEALPPPACPSAPAP 353
P P P E P P P PAP
Sbjct: 325 KEPAPTTTKSAPTTPKE--PAPTTPKKPAP 352
Score = 32.7 bits (73), Expect = 0.82
Identities = 22/62 (35%), Positives = 28/62 (45%), Gaps = 6/62 (9%)
Query: 295 PGSQSPVVPAGAVSTGSSSPGTP-QPAPQLPLNAAP--PSSVPPVPPSEALPPPACPSAP 351
P +P PA +T +P TP +PAP P AP P + P P + P P P
Sbjct: 491 PAPTTPKEPA-PTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKL--APTTPEKP 547
Query: 352 AP 353
AP
Sbjct: 548 AP 549
Score = 32.0 bits (71), Expect = 1.4
Identities = 23/65 (35%), Positives = 27/65 (41%), Gaps = 7/65 (10%)
Query: 294 SPGSQSPVVPAGAVSTGSS--SPGTPQ-PAPQLPLNAAP--PSSVPPVPPSEALPPPACP 348
+P +P P T +P TP+ PAP P AP P P P E P P P
Sbjct: 519 TPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEE--PAPTTP 576
Query: 349 SAPAP 353
A AP
Sbjct: 577 KAAAP 581
Score = 31.6 bits (70), Expect = 1.8
Identities = 22/65 (33%), Positives = 27/65 (41%), Gaps = 7/65 (10%)
Query: 294 SPGSQSPVVPAGAVSTGSS--SPGTPQP-APQLPLNAAP--PSSVPPVPPSEALPPPACP 348
+P +P P T +P TP+ AP P AP P + P P E P P P
Sbjct: 511 TPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEE--PTPTTP 568
Query: 349 SAPAP 353
PAP
Sbjct: 569 EEPAP 573
Score = 31.2 bits (69), Expect = 2.4
Identities = 19/63 (30%), Positives = 25/63 (39%), Gaps = 3/63 (4%)
Query: 294 SPGSQSPVVPAGAVSTGSS--SPGTPQ-PAPQLPLNAAPPSSVPPVPPSEALPPPACPSA 350
+P +P P T +P TP+ P P P AP + P + P P P
Sbjct: 535 TPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKE 594
Query: 351 PAP 353
PAP
Sbjct: 595 PAP 597
Score = 29.6 bits (65), Expect = 7.0
Identities = 26/89 (29%), Positives = 35/89 (39%), Gaps = 20/89 (22%)
Query: 284 SPLAANGQSPS----PGSQSPVVPAGAVSTGSSSPGTP-QPAPQLPLNA----------- 327
+P A +P+ P +P PA +T SP TP +PAP +A
Sbjct: 390 APTAPKKPAPTTPKEPAPTTPKEPA-PTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTT 448
Query: 328 ---APPSSVPPVPPSEALPPPACPSAPAP 353
AP + P P + P P P PAP
Sbjct: 449 TKSAPTTPKEPSPTTTKEPAPTTPKEPAP 477
Score = 29.3 bits (64), Expect = 9.1
Identities = 19/68 (27%), Positives = 23/68 (33%), Gaps = 8/68 (11%)
Query: 294 SPGSQSPVVPAGAVSTGSSSPGTPQPAPQLPLNAAP-----PSSVP---PVPPSEALPPP 345
+P +P P G T P P P AP P+S P P + P
Sbjct: 607 TPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGTAP 666
Query: 346 ACPSAPAP 353
P PAP
Sbjct: 667 TTPKEPAP 674
>gi|189181720 proteoglycan 4 isoform B [Homo sapiens]
Length = 1363
Score = 44.7 bits (104), Expect = 2e-04
Identities = 24/77 (31%), Positives = 31/77 (40%), Gaps = 5/77 (6%)
Query: 285 PLAANGQSPSPGSQSPVVPAGAVSTGSSSPGTPQPAPQLPLNAAPPSSVPPVPPSEALPP 344
P + P+P +P G ST S +PAP P AP + P P + P
Sbjct: 748 PAPTTPKKPAPKELAPTTTKGPTSTTSD-----KPAPTTPKETAPTTPKEPAPTTPKKPA 802
Query: 345 PACPSAPAPRRSIISRP 361
P P P P S +S P
Sbjct: 803 PTTPETPPPTTSEVSTP 819
Score = 40.8 bits (94), Expect = 0.003
Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 5/70 (7%)
Query: 285 PLAANGQSPSPGSQSPVVPAGAVSTGSSSPGTP-QPAPQLPLNAAPPSSVPPVPPSEALP 343
P + P+P + P +T S+P TP +PAP P AP + P P + P
Sbjct: 363 PAPTTPKEPAPTTTKEPAP----TTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEP 418
Query: 344 PPACPSAPAP 353
P P PAP
Sbjct: 419 TPTTPKEPAP 428
Score = 38.9 bits (89), Expect = 0.012
Identities = 20/62 (32%), Positives = 25/62 (40%), Gaps = 2/62 (3%)
Query: 294 SPGSQSPVVPAGAVSTGSSSPG--TPQPAPQLPLNAAPPSSVPPVPPSEALPPPACPSAP 351
+P +P P T P T +PAP P AP + P P + P P P P
Sbjct: 406 TPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEP 465
Query: 352 AP 353
AP
Sbjct: 466 AP 467
Score = 38.1 bits (87), Expect = 0.020
Identities = 26/90 (28%), Positives = 36/90 (40%), Gaps = 12/90 (13%)
Query: 284 SPLAANGQSPSPGSQSPVVPAG-AVSTGSSSPGTP---------QPAPQLPLNAAPPSSV 333
SP +P+ +P A +T S+P TP +PAP P AP +
Sbjct: 474 SPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPK 533
Query: 334 PPVPPSEALPPPACPSAPAPRRSIISRPPP 363
P P + P P P PAP + +P P
Sbjct: 534 KPAPTTPKEPAPTTPKEPAP--TTTKKPAP 561
Score = 38.1 bits (87), Expect = 0.020
Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
Query: 291 QSPSPGSQSPVVPAGAVSTGSSSPGTPQ-PAPQLPLNAAPPSSVPPVPPSEALPPPACPS 349
+ P+P + + P + +P TP+ PAP P AAP + P P + P P P
Sbjct: 597 EKPAPTTPEELAPT---TPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPK 653
Query: 350 APAP 353
PAP
Sbjct: 654 EPAP 657
Score = 36.2 bits (82), Expect = 0.075
Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 3/69 (4%)
Query: 285 PLAANGQSPSPGSQSPVVPAGAVSTGSSSPGTPQPAPQLPLNAAPPSSVPPVPPSEALPP 344
P + P+P ++ P P ++P +PAP P AP + P P + P
Sbjct: 418 PTPTTPKEPAPTTKEPA-PTTPKEPAPTAP--KKPAPTTPKEPAPTTPKEPAPTTTKEPS 474
Query: 345 PACPSAPAP 353
P P PAP
Sbjct: 475 PTTPKEPAP 483
Score = 35.0 bits (79), Expect = 0.17
Identities = 21/73 (28%), Positives = 29/73 (39%), Gaps = 4/73 (5%)
Query: 284 SPLAANGQSPSPGSQSPVVPAGAVSTGSSSPG--TP-QPAPQLPLNAAPPSSVPPVPPSE 340
+P +P+ +P P T P TP +PAP P P + P P ++
Sbjct: 372 APTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTK 431
Query: 341 ALPPPACPSAPAP 353
P P P PAP
Sbjct: 432 E-PAPTTPKEPAP 443
Score = 35.0 bits (79), Expect = 0.17
Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 6/76 (7%)
Query: 283 ASPLAANGQSPS----PGSQSPVVPAGAVSTGSSSPGTP-QPAPQLPLNAAPPSSVPPVP 337
++P SP+ P +P PA + +P TP +PAP P AP ++ P P
Sbjct: 503 SAPTTPKEPSPTTTKEPAPTTPKEPA-PTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAP 561
Query: 338 PSEALPPPACPSAPAP 353
+ P P P AP
Sbjct: 562 TTPKEPAPTTPKETAP 577
Score = 34.3 bits (77), Expect = 0.28
Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
Query: 295 PGSQSPVVPAGAVSTGSSSPGTPQPAPQLPLNAAPPSSVPPVPPSEALPPPACPSAPAP 353
P S +P P +T S+P TP+ +AP + P P + P P P PAP
Sbjct: 317 PASTTPKEPTP--TTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAP 373
Score = 34.3 bits (77), Expect = 0.28
Identities = 19/76 (25%), Positives = 28/76 (36%), Gaps = 6/76 (7%)
Query: 285 PLAANGQSPSPGSQSPVVPAGAVSTGSSSPGTP------QPAPQLPLNAAPPSSVPPVPP 338
P + P+P + P ++P P +PAP P AP + P
Sbjct: 615 PTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPT 674
Query: 339 SEALPPPACPSAPAPR 354
+ P P P PAP+
Sbjct: 675 TLKEPAPTTPKKPAPK 690
Score = 33.9 bits (76), Expect = 0.37
Identities = 22/81 (27%), Positives = 31/81 (38%), Gaps = 11/81 (13%)
Query: 285 PLAANGQSPSPGSQSPVVPAGAVSTG----------SSSPGTP-QPAPQLPLNAAPPSSV 333
P + P+P +P ST ++P TP +PAP P AP +
Sbjct: 679 PAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPK 738
Query: 334 PPVPPSEALPPPACPSAPAPR 354
P + P P P PAP+
Sbjct: 739 GTAPTTLKEPAPTTPKKPAPK 759
Score = 33.5 bits (75), Expect = 0.48
Identities = 27/90 (30%), Positives = 37/90 (41%), Gaps = 23/90 (25%)
Query: 285 PLAANGQSPSPGS--QSPVVPAG-AVSTGSSSPGTP---------QPAPQLPLNAAPPSS 332
P + + P+P + +P P A +T S+P TP +PAP P AP ++
Sbjct: 317 PASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTT 376
Query: 333 VPPVP---------PSEALPPPACPSAPAP 353
P P P E P P P PAP
Sbjct: 377 KEPAPTTTKSAPTTPKE--PAPTTPKKPAP 404
Score = 32.7 bits (73), Expect = 0.82
Identities = 22/62 (35%), Positives = 28/62 (45%), Gaps = 6/62 (9%)
Query: 295 PGSQSPVVPAGAVSTGSSSPGTP-QPAPQLPLNAAP--PSSVPPVPPSEALPPPACPSAP 351
P +P PA +T +P TP +PAP P AP P + P P + P P P
Sbjct: 543 PAPTTPKEPA-PTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKL--APTTPEKP 599
Query: 352 AP 353
AP
Sbjct: 600 AP 601
Score = 32.0 bits (71), Expect = 1.4
Identities = 23/65 (35%), Positives = 27/65 (41%), Gaps = 7/65 (10%)
Query: 294 SPGSQSPVVPAGAVSTGSS--SPGTPQ-PAPQLPLNAAP--PSSVPPVPPSEALPPPACP 348
+P +P P T +P TP+ PAP P AP P P P E P P P
Sbjct: 571 TPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEE--PAPTTP 628
Query: 349 SAPAP 353
A AP
Sbjct: 629 KAAAP 633
Score = 31.6 bits (70), Expect = 1.8
Identities = 22/65 (33%), Positives = 27/65 (41%), Gaps = 7/65 (10%)
Query: 294 SPGSQSPVVPAGAVSTGSS--SPGTPQP-APQLPLNAAP--PSSVPPVPPSEALPPPACP 348
+P +P P T +P TP+ AP P AP P + P P E P P P
Sbjct: 563 TPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEE--PTPTTP 620
Query: 349 SAPAP 353
PAP
Sbjct: 621 EEPAP 625
Score = 31.2 bits (69), Expect = 2.4
Identities = 19/63 (30%), Positives = 25/63 (39%), Gaps = 3/63 (4%)
Query: 294 SPGSQSPVVPAGAVSTGSS--SPGTPQ-PAPQLPLNAAPPSSVPPVPPSEALPPPACPSA 350
+P +P P T +P TP+ P P P AP + P + P P P
Sbjct: 587 TPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKE 646
Query: 351 PAP 353
PAP
Sbjct: 647 PAP 649
Score = 29.6 bits (65), Expect = 7.0
Identities = 26/89 (29%), Positives = 35/89 (39%), Gaps = 20/89 (22%)
Query: 284 SPLAANGQSPS----PGSQSPVVPAGAVSTGSSSPGTP-QPAPQLPLNA----------- 327
+P A +P+ P +P PA +T SP TP +PAP +A
Sbjct: 442 APTAPKKPAPTTPKEPAPTTPKEPA-PTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTT 500
Query: 328 ---APPSSVPPVPPSEALPPPACPSAPAP 353
AP + P P + P P P PAP
Sbjct: 501 TKSAPTTPKEPSPTTTKEPAPTTPKEPAP 529
Score = 29.3 bits (64), Expect = 9.1
Identities = 19/68 (27%), Positives = 23/68 (33%), Gaps = 8/68 (11%)
Query: 294 SPGSQSPVVPAGAVSTGSSSPGTPQPAPQLPLNAAP-----PSSVP---PVPPSEALPPP 345
+P +P P G T P P P AP P+S P P + P
Sbjct: 659 TPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGTAP 718
Query: 346 ACPSAPAP 353
P PAP
Sbjct: 719 TTPKEPAP 726
>gi|67190163 proteoglycan 4 isoform A [Homo sapiens]
Length = 1404
Score = 44.7 bits (104), Expect = 2e-04
Identities = 24/77 (31%), Positives = 31/77 (40%), Gaps = 5/77 (6%)
Query: 285 PLAANGQSPSPGSQSPVVPAGAVSTGSSSPGTPQPAPQLPLNAAPPSSVPPVPPSEALPP 344
P + P+P +P G ST S +PAP P AP + P P + P
Sbjct: 789 PAPTTPKKPAPKELAPTTTKGPTSTTSD-----KPAPTTPKETAPTTPKEPAPTTPKKPA 843
Query: 345 PACPSAPAPRRSIISRP 361
P P P P S +S P
Sbjct: 844 PTTPETPPPTTSEVSTP 860
Score = 40.8 bits (94), Expect = 0.003
Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 5/70 (7%)
Query: 285 PLAANGQSPSPGSQSPVVPAGAVSTGSSSPGTP-QPAPQLPLNAAPPSSVPPVPPSEALP 343
P + P+P + P +T S+P TP +PAP P AP + P P + P
Sbjct: 404 PAPTTPKEPAPTTTKEPAP----TTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEP 459
Query: 344 PPACPSAPAP 353
P P PAP
Sbjct: 460 TPTTPKEPAP 469
Score = 38.9 bits (89), Expect = 0.012
Identities = 20/62 (32%), Positives = 25/62 (40%), Gaps = 2/62 (3%)
Query: 294 SPGSQSPVVPAGAVSTGSSSPG--TPQPAPQLPLNAAPPSSVPPVPPSEALPPPACPSAP 351
+P +P P T P T +PAP P AP + P P + P P P P
Sbjct: 447 TPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEP 506
Query: 352 AP 353
AP
Sbjct: 507 AP 508
Score = 38.1 bits (87), Expect = 0.020
Identities = 26/90 (28%), Positives = 36/90 (40%), Gaps = 12/90 (13%)
Query: 284 SPLAANGQSPSPGSQSPVVPAG-AVSTGSSSPGTP---------QPAPQLPLNAAPPSSV 333
SP +P+ +P A +T S+P TP +PAP P AP +
Sbjct: 515 SPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPK 574
Query: 334 PPVPPSEALPPPACPSAPAPRRSIISRPPP 363
P P + P P P PAP + +P P
Sbjct: 575 KPAPTTPKEPAPTTPKEPAP--TTTKKPAP 602
Score = 38.1 bits (87), Expect = 0.020
Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
Query: 291 QSPSPGSQSPVVPAGAVSTGSSSPGTPQ-PAPQLPLNAAPPSSVPPVPPSEALPPPACPS 349
+ P+P + + P + +P TP+ PAP P AAP + P P + P P P
Sbjct: 638 EKPAPTTPEELAPT---TPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPK 694
Query: 350 APAP 353
PAP
Sbjct: 695 EPAP 698
Score = 36.2 bits (82), Expect = 0.075
Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 3/69 (4%)
Query: 285 PLAANGQSPSPGSQSPVVPAGAVSTGSSSPGTPQPAPQLPLNAAPPSSVPPVPPSEALPP 344
P + P+P ++ P P ++P +PAP P AP + P P + P
Sbjct: 459 PTPTTPKEPAPTTKEPA-PTTPKEPAPTAP--KKPAPTTPKEPAPTTPKEPAPTTTKEPS 515
Query: 345 PACPSAPAP 353
P P PAP
Sbjct: 516 PTTPKEPAP 524
Score = 35.0 bits (79), Expect = 0.17
Identities = 21/73 (28%), Positives = 29/73 (39%), Gaps = 4/73 (5%)
Query: 284 SPLAANGQSPSPGSQSPVVPAGAVSTGSSSPG--TP-QPAPQLPLNAAPPSSVPPVPPSE 340
+P +P+ +P P T P TP +PAP P P + P P ++
Sbjct: 413 APTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTK 472
Query: 341 ALPPPACPSAPAP 353
P P P PAP
Sbjct: 473 E-PAPTTPKEPAP 484
Score = 35.0 bits (79), Expect = 0.17
Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 6/76 (7%)
Query: 283 ASPLAANGQSPS----PGSQSPVVPAGAVSTGSSSPGTP-QPAPQLPLNAAPPSSVPPVP 337
++P SP+ P +P PA + +P TP +PAP P AP ++ P P
Sbjct: 544 SAPTTPKEPSPTTTKEPAPTTPKEPA-PTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAP 602
Query: 338 PSEALPPPACPSAPAP 353
+ P P P AP
Sbjct: 603 TTPKEPAPTTPKETAP 618
Score = 34.3 bits (77), Expect = 0.28
Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
Query: 295 PGSQSPVVPAGAVSTGSSSPGTPQPAPQLPLNAAPPSSVPPVPPSEALPPPACPSAPAP 353
P S +P P +T S+P TP+ +AP + P P + P P P PAP
Sbjct: 358 PASTTPKEPTP--TTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAP 414
Score = 34.3 bits (77), Expect = 0.28
Identities = 19/76 (25%), Positives = 28/76 (36%), Gaps = 6/76 (7%)
Query: 285 PLAANGQSPSPGSQSPVVPAGAVSTGSSSPGTP------QPAPQLPLNAAPPSSVPPVPP 338
P + P+P + P ++P P +PAP P AP + P
Sbjct: 656 PTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPT 715
Query: 339 SEALPPPACPSAPAPR 354
+ P P P PAP+
Sbjct: 716 TLKEPAPTTPKKPAPK 731
Score = 33.9 bits (76), Expect = 0.37
Identities = 22/81 (27%), Positives = 31/81 (38%), Gaps = 11/81 (13%)
Query: 285 PLAANGQSPSPGSQSPVVPAGAVSTG----------SSSPGTP-QPAPQLPLNAAPPSSV 333
P + P+P +P ST ++P TP +PAP P AP +
Sbjct: 720 PAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPK 779
Query: 334 PPVPPSEALPPPACPSAPAPR 354
P + P P P PAP+
Sbjct: 780 GTAPTTLKEPAPTTPKKPAPK 800
Score = 33.5 bits (75), Expect = 0.48
Identities = 27/90 (30%), Positives = 37/90 (41%), Gaps = 23/90 (25%)
Query: 285 PLAANGQSPSPGS--QSPVVPAG-AVSTGSSSPGTP---------QPAPQLPLNAAPPSS 332
P + + P+P + +P P A +T S+P TP +PAP P AP ++
Sbjct: 358 PASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTT 417
Query: 333 VPPVP---------PSEALPPPACPSAPAP 353
P P P E P P P PAP
Sbjct: 418 KEPAPTTTKSAPTTPKE--PAPTTPKKPAP 445
Score = 32.7 bits (73), Expect = 0.82
Identities = 22/62 (35%), Positives = 28/62 (45%), Gaps = 6/62 (9%)
Query: 295 PGSQSPVVPAGAVSTGSSSPGTP-QPAPQLPLNAAP--PSSVPPVPPSEALPPPACPSAP 351
P +P PA +T +P TP +PAP P AP P + P P + P P P
Sbjct: 584 PAPTTPKEPA-PTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKL--APTTPEKP 640
Query: 352 AP 353
AP
Sbjct: 641 AP 642
Score = 32.0 bits (71), Expect = 1.4
Identities = 23/65 (35%), Positives = 27/65 (41%), Gaps = 7/65 (10%)
Query: 294 SPGSQSPVVPAGAVSTGSS--SPGTPQ-PAPQLPLNAAP--PSSVPPVPPSEALPPPACP 348
+P +P P T +P TP+ PAP P AP P P P E P P P
Sbjct: 612 TPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEE--PAPTTP 669
Query: 349 SAPAP 353
A AP
Sbjct: 670 KAAAP 674
Score = 31.6 bits (70), Expect = 1.8
Identities = 22/65 (33%), Positives = 27/65 (41%), Gaps = 7/65 (10%)
Query: 294 SPGSQSPVVPAGAVSTGSS--SPGTPQP-APQLPLNAAP--PSSVPPVPPSEALPPPACP 348
+P +P P T +P TP+ AP P AP P + P P E P P P
Sbjct: 604 TPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEE--PTPTTP 661
Query: 349 SAPAP 353
PAP
Sbjct: 662 EEPAP 666
Score = 31.2 bits (69), Expect = 2.4
Identities = 19/63 (30%), Positives = 25/63 (39%), Gaps = 3/63 (4%)
Query: 294 SPGSQSPVVPAGAVSTGSS--SPGTPQ-PAPQLPLNAAPPSSVPPVPPSEALPPPACPSA 350
+P +P P T +P TP+ P P P AP + P + P P P
Sbjct: 628 TPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKE 687
Query: 351 PAP 353
PAP
Sbjct: 688 PAP 690
Score = 29.6 bits (65), Expect = 7.0
Identities = 26/89 (29%), Positives = 35/89 (39%), Gaps = 20/89 (22%)
Query: 284 SPLAANGQSPS----PGSQSPVVPAGAVSTGSSSPGTP-QPAPQLPLNA----------- 327
+P A +P+ P +P PA +T SP TP +PAP +A
Sbjct: 483 APTAPKKPAPTTPKEPAPTTPKEPA-PTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTT 541
Query: 328 ---APPSSVPPVPPSEALPPPACPSAPAP 353
AP + P P + P P P PAP
Sbjct: 542 TKSAPTTPKEPSPTTTKEPAPTTPKEPAP 570
Score = 29.3 bits (64), Expect = 9.1
Identities = 19/68 (27%), Positives = 23/68 (33%), Gaps = 8/68 (11%)
Query: 294 SPGSQSPVVPAGAVSTGSSSPGTPQPAPQLPLNAAP-----PSSVP---PVPPSEALPPP 345
+P +P P G T P P P AP P+S P P + P
Sbjct: 700 TPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGTAP 759
Query: 346 ACPSAPAP 353
P PAP
Sbjct: 760 TTPKEPAP 767
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.136 0.434
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,642,348
Number of Sequences: 37866
Number of extensions: 1488942
Number of successful extensions: 26750
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 517
Number of HSP's successfully gapped in prelim test: 1407
Number of HSP's that attempted gapping in prelim test: 11892
Number of HSP's gapped (non-prelim): 9636
length of query: 520
length of database: 18,247,518
effective HSP length: 107
effective length of query: 413
effective length of database: 14,195,856
effective search space: 5862888528
effective search space used: 5862888528
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.