Guide to the Human Genome
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Name: RAB33A Sequence: fasta or formatted (237aa) NCBI GI: 4758996
Description:

Ras-related protein Rab-33A

Referenced in:

Rab

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.2         17           2
 C cysteine            3.4          8           1
 D aspartate           4.6         11           1
 E glutamate           6.8         16           1
 F phenylalanine       5.1         12           1
 G glycine             5.5         13           2
 H histidine           2.1          5           1
 I isoleucine          5.1         12           2
 K lysine              8.0         19           1
 L leucine             8.4         20           2
 M methionine          2.5          6           1
 N asparagine          3.8          9           1
 P proline             4.2         10           2
 Q glutamine           6.3         15           2
 R arginine            4.2         10           1
 S serine              6.3         15           2
 T threonine           5.1         12           1
 V valine              8.4         20           2
 W tryptophan          0.8          2           1
 Y tyrosine            2.1          5           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Ras-related protein Rab-33A 
RAB33B                0.527   RAB33B, member RAS oncogene family 
RAB30                 0.301   RAB30, member RAS oncogene family 
RAB35                 0.297   RAB35, member RAS oncogene family 
RAB1A                 0.290   RAB1A, member RAS oncogene family isoform 1 
RAB1B                 0.281   RAB1B, member RAS oncogene family 
RAB19                 0.275   RAB19, member RAS oncogene family 
RAB13                 0.264   RAB13, member RAS oncogene family 
RAB8B                 0.264   RAB8B, member RAS oncogene family 
RAB8A                 0.262   mel transforming oncogene 
RAB10                 0.262   ras-related GTP-binding protein RAB10 
LOC100131294          0.257   PREDICTED: similar to RAB13, member RAS oncogene fa...
LOC100131294          0.257   PREDICTED: similar to hCG24991 
LOC100131294          0.257   PREDICTED: similar to hCG24991 
RAB43                 0.253   RAB43 protein 
RAB39B                0.253   RAB39B, member RAS oncogene family 
RAB18                 0.237   RAB18, member RAS oncogene family 
RAB11B                0.233   RAB11B, member RAS oncogene family 
RAB39                 0.231   RAB39, member RAS oncogene family 
RAB11A                0.229   Ras-related protein Rab-11A 
RAB26                 0.229   RAB26, member RAS oncogene family 
RAB37                 0.220   RAB37, member RAS oncogene family isoform 2 
RAB6A                 0.220   RAB6A, member RAS oncogene family isoform a 
RAB14                 0.220   GTPase Rab14 
RAB2A                 0.218   RAB2A, member RAS oncogene family 
RASEF                 0.218   RAS and EF-hand domain containing 
RAB5A                 0.215   RAB5A, member RAS oncogene family 
RAB2B                 0.215   RAB2B protein isoform 1 
RAB6A                 0.215   RAB6A, member RAS oncogene family isoform b 
RAB5C                 0.213   RAB5C, member RAS oncogene family isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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