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Search of human proteins with 172072600
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|172072600 Fc receptor, IgA, IgM, high affinity isoform 1
[Homo sapiens]
(265 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|172072600 Fc receptor, IgA, IgM, high affinity isoform 1 [Hom... 565 e-161
gi|117320515 Fc receptor, IgA, IgM, high affinity isoform 1 [Hom... 565 e-161
gi|172072602 Fc receptor, IgA, IgM, high affinity isoform 2 [Hom... 352 2e-97
gi|31377806 polymeric immunoglobulin receptor precursor [Homo sa... 99 3e-21
gi|216547575 Fas apoptotic inhibitory molecule 3 isoform a [Homo... 67 1e-11
gi|4885641 Fas apoptotic inhibitory molecule 3 isoform a [Homo s... 67 1e-11
gi|56550061 leukocyte membrane antigen [Homo sapiens] 59 4e-09
gi|31324530 CD300e molecule [Homo sapiens] 57 2e-08
gi|5729776 CD300C antigen [Homo sapiens] 54 1e-07
gi|38455398 NK inhibitory receptor precursor [Homo sapiens] 54 2e-07
gi|21687218 CD300 molecule-like family member g [Homo sapiens] 49 3e-06
gi|37700254 triggering receptor expressed on myeloid cells-like ... 49 5e-06
gi|154759271 CD300 molecule-like family member b [Homo sapiens] 49 5e-06
gi|239756941 PREDICTED: similar to CD300C antigen [Homo sapiens] 49 6e-06
gi|239751445 PREDICTED: similar to CD300C antigen [Homo sapiens] 49 6e-06
gi|239745950 PREDICTED: similar to CD300C antigen [Homo sapiens] 49 6e-06
gi|153945782 natural cytotoxicity triggering receptor 2 [Homo sa... 45 7e-05
gi|169646348 CD300 molecule-like family member d [Homo sapiens] 44 2e-04
gi|9507203 triggering receptor expressed on myeloid cells 2 prec... 42 4e-04
gi|153085429 hepatitis A virus cellular receptor 1 [Homo sapiens] 40 0.002
gi|153085427 hepatitis A virus cellular receptor 1 [Homo sapiens] 40 0.002
gi|30794266 triggering receptor expressed on myeloid cells-like ... 39 0.005
gi|130978672 adenosine A3 receptor isoform 3 [Homo sapiens] 35 0.052
gi|46559769 adenosine A3 receptor isoform 1 [Homo sapiens] 35 0.052
gi|4502659 sialic acid binding Ig-like lectin 5 [Homo sapiens] 35 0.088
gi|38372931 brevican isoform 2 [Homo sapiens] 33 0.20
gi|38372935 brevican isoform 1 [Homo sapiens] 33 0.20
gi|42544177 complement component (3d/Epstein Barr virus) recepto... 31 0.98
gi|54792123 complement component (3d/Epstein Barr virus) recepto... 31 0.98
gi|8924262 triggering receptor expressed on myeloid cells 1 [Hom... 31 0.98
>gi|172072600 Fc receptor, IgA, IgM, high affinity isoform 1 [Homo
sapiens]
Length = 265
Score = 565 bits (1456), Expect = e-161
Identities = 265/265 (100%), Positives = 265/265 (100%)
Query: 1 MDGEATVKPGEQKEVVRRGREVDYSRLIAGTLPQSHVTSRRAGWKMPLFLILCLLQGSSF 60
MDGEATVKPGEQKEVVRRGREVDYSRLIAGTLPQSHVTSRRAGWKMPLFLILCLLQGSSF
Sbjct: 1 MDGEATVKPGEQKEVVRRGREVDYSRLIAGTLPQSHVTSRRAGWKMPLFLILCLLQGSSF 60
Query: 61 ALPQKRPHPRWLWEGSLPSRTHLRAMGTLRPSSPLCWREESSFAAPNSLKGSRLVSGEPG 120
ALPQKRPHPRWLWEGSLPSRTHLRAMGTLRPSSPLCWREESSFAAPNSLKGSRLVSGEPG
Sbjct: 61 ALPQKRPHPRWLWEGSLPSRTHLRAMGTLRPSSPLCWREESSFAAPNSLKGSRLVSGEPG 120
Query: 121 GAVTIQCHYAPSSVNRHQRKYWCRLGPPRWICQTIVSTNQYTHHRYRDRVALTDFPQRGL 180
GAVTIQCHYAPSSVNRHQRKYWCRLGPPRWICQTIVSTNQYTHHRYRDRVALTDFPQRGL
Sbjct: 121 GAVTIQCHYAPSSVNRHQRKYWCRLGPPRWICQTIVSTNQYTHHRYRDRVALTDFPQRGL 180
Query: 181 FVVRLSQLSPDDIGCYLCGIGSENNMLFLSMNLTISAVLFQKMKAALGPWLLSLPCWPCL 240
FVVRLSQLSPDDIGCYLCGIGSENNMLFLSMNLTISAVLFQKMKAALGPWLLSLPCWPCL
Sbjct: 181 FVVRLSQLSPDDIGCYLCGIGSENNMLFLSMNLTISAVLFQKMKAALGPWLLSLPCWPCL 240
Query: 241 CLWLWFYCKGSSGEGGPLRRQKGSP 265
CLWLWFYCKGSSGEGGPLRRQKGSP
Sbjct: 241 CLWLWFYCKGSSGEGGPLRRQKGSP 265
>gi|117320515 Fc receptor, IgA, IgM, high affinity isoform 1 [Homo
sapiens]
Length = 265
Score = 565 bits (1456), Expect = e-161
Identities = 265/265 (100%), Positives = 265/265 (100%)
Query: 1 MDGEATVKPGEQKEVVRRGREVDYSRLIAGTLPQSHVTSRRAGWKMPLFLILCLLQGSSF 60
MDGEATVKPGEQKEVVRRGREVDYSRLIAGTLPQSHVTSRRAGWKMPLFLILCLLQGSSF
Sbjct: 1 MDGEATVKPGEQKEVVRRGREVDYSRLIAGTLPQSHVTSRRAGWKMPLFLILCLLQGSSF 60
Query: 61 ALPQKRPHPRWLWEGSLPSRTHLRAMGTLRPSSPLCWREESSFAAPNSLKGSRLVSGEPG 120
ALPQKRPHPRWLWEGSLPSRTHLRAMGTLRPSSPLCWREESSFAAPNSLKGSRLVSGEPG
Sbjct: 61 ALPQKRPHPRWLWEGSLPSRTHLRAMGTLRPSSPLCWREESSFAAPNSLKGSRLVSGEPG 120
Query: 121 GAVTIQCHYAPSSVNRHQRKYWCRLGPPRWICQTIVSTNQYTHHRYRDRVALTDFPQRGL 180
GAVTIQCHYAPSSVNRHQRKYWCRLGPPRWICQTIVSTNQYTHHRYRDRVALTDFPQRGL
Sbjct: 121 GAVTIQCHYAPSSVNRHQRKYWCRLGPPRWICQTIVSTNQYTHHRYRDRVALTDFPQRGL 180
Query: 181 FVVRLSQLSPDDIGCYLCGIGSENNMLFLSMNLTISAVLFQKMKAALGPWLLSLPCWPCL 240
FVVRLSQLSPDDIGCYLCGIGSENNMLFLSMNLTISAVLFQKMKAALGPWLLSLPCWPCL
Sbjct: 181 FVVRLSQLSPDDIGCYLCGIGSENNMLFLSMNLTISAVLFQKMKAALGPWLLSLPCWPCL 240
Query: 241 CLWLWFYCKGSSGEGGPLRRQKGSP 265
CLWLWFYCKGSSGEGGPLRRQKGSP
Sbjct: 241 CLWLWFYCKGSSGEGGPLRRQKGSP 265
>gi|172072602 Fc receptor, IgA, IgM, high affinity isoform 2 [Homo
sapiens]
Length = 552
Score = 352 bits (903), Expect = 2e-97
Identities = 177/217 (81%), Positives = 178/217 (82%), Gaps = 25/217 (11%)
Query: 1 MDGEATVKPGEQKEVVRRGREVDYSRLIAGTLPQSHVTSRRAGWKMPLFLILCLLQGSSF 60
MDGEATVKPGEQ + G D P F GSSF
Sbjct: 1 MDGEATVKPGEQVPLWTHGWPPDDPS--------------------PSFAA-----GSSF 35
Query: 61 ALPQKRPHPRWLWEGSLPSRTHLRAMGTLRPSSPLCWREESSFAAPNSLKGSRLVSGEPG 120
ALPQKRPHPRWLWEGSLPSRTHLRAMGTLRPSSPLCWREESSFAAPNSLKGSRLVSGEPG
Sbjct: 36 ALPQKRPHPRWLWEGSLPSRTHLRAMGTLRPSSPLCWREESSFAAPNSLKGSRLVSGEPG 95
Query: 121 GAVTIQCHYAPSSVNRHQRKYWCRLGPPRWICQTIVSTNQYTHHRYRDRVALTDFPQRGL 180
GAVTIQCHYAPSSVNRHQRKYWCRLGPPRWICQTIVSTNQYTHHRYRDRVALTDFPQRGL
Sbjct: 96 GAVTIQCHYAPSSVNRHQRKYWCRLGPPRWICQTIVSTNQYTHHRYRDRVALTDFPQRGL 155
Query: 181 FVVRLSQLSPDDIGCYLCGIGSENNMLFLSMNLTISA 217
FVVRLSQLSPDDIGCYLCGIGSENNMLFLSMNLTISA
Sbjct: 156 FVVRLSQLSPDDIGCYLCGIGSENNMLFLSMNLTISA 192
>gi|31377806 polymeric immunoglobulin receptor precursor [Homo
sapiens]
Length = 764
Score = 99.4 bits (246), Expect = 3e-21
Identities = 48/106 (45%), Positives = 66/106 (62%), Gaps = 1/106 (0%)
Query: 111 GSRLVSGEPGGAVTIQCHYAPSSVNRHQRKYWCRLGPPRWICQTIVSTNQYTHHRYRDRV 170
G V+ G +V+I C+Y P+SVNRH RKYWCR G R C T++S+ Y +Y R
Sbjct: 24 GPEEVNSVEGNSVSITCYYPPTSVNRHTRKYWCRQGA-RGGCITLISSEGYVSSKYAGRA 82
Query: 171 ALTDFPQRGLFVVRLSQLSPDDIGCYLCGIGSENNMLFLSMNLTIS 216
LT+FP+ G FVV ++QLS DD G Y CG+G + L ++L +S
Sbjct: 83 NLTNFPENGTFVVNIAQLSQDDSGRYKCGLGINSRGLSFDVSLEVS 128
Score = 50.8 bits (120), Expect = 1e-06
Identities = 38/121 (31%), Positives = 56/121 (46%), Gaps = 19/121 (15%)
Query: 87 GTLRPSSPL-CWR----EESSFAAPNSLKGSRLVSGEPGGAVTIQCHYAPSSVNRHQRK- 140
G L+ SP+ W+ EES+ + +V G GG+V + C Y NR + K
Sbjct: 331 GQLQEGSPIQAWQLFVNEESTIP-----RSPTVVKGVAGGSVAVLCPY-----NRKESKS 380
Query: 141 --YWCRL-GPPRWICQTIVSTNQYTHHRYRDRVALTDFPQRGLFVVRLSQLSPDDIGCYL 197
YWC G C +V + + +Y R++L + P G F V L+QL+ D G Y
Sbjct: 381 IKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGRLSLLEEPGNGTFTVILNQLTSRDAGFYW 440
Query: 198 C 198
C
Sbjct: 441 C 441
Score = 38.1 bits (87), Expect = 0.008
Identities = 27/93 (29%), Positives = 40/93 (43%), Gaps = 3/93 (3%)
Query: 114 LVSGEPGGAVTIQCHYAPSSVNRHQRKYWCRLGPPRWICQTIVSTNQYTHHRYRDRVALT 173
LV + G+VT C P N K+ CR C +V+T + R+ L
Sbjct: 244 LVYEDLRGSVTFHCALGPEVAN--VAKFLCRQSSGE-NCDVVVNTLGKRAPAFEGRILLN 300
Query: 174 DFPQRGLFVVRLSQLSPDDIGCYLCGIGSENNM 206
+ G F V ++ L +D G YLCG S+ +
Sbjct: 301 PQDKDGSFSVVITGLRKEDAGRYLCGAHSDGQL 333
Score = 37.0 bits (84), Expect = 0.018
Identities = 39/162 (24%), Positives = 71/162 (43%), Gaps = 28/162 (17%)
Query: 106 PNSLKGSRLVSGEPGGAVTIQCHYAPSSVNRHQRKY-WCRLGPPRWICQTIVSTNQYTHH 164
P L +++ + + G VTI C + + + + Y L P ++ ++ Y +
Sbjct: 131 PGLLNDTKVYTVDLGRTVTINCPFKTENAQKRKSLYKQIGLYPV-----LVIDSSGYVNP 185
Query: 165 RYRDRVALTDFPQRG--LFVVRLSQLSPDDIGCYLCGIGSENNMLFLSMNLTI----SAV 218
Y R+ L D G LF V ++QL D G YLC G ++N + +L + +
Sbjct: 186 NYTGRIRL-DIQGTGQLLFSVVINQLRLSDAGQYLCQAGDDSNSNKKNADLQVLKPEPEL 244
Query: 219 LFQKMK------AALGPWLLSLPCWPCLCLWLWFYCKGSSGE 254
+++ ++ ALGP + ++ F C+ SSGE
Sbjct: 245 VYEDLRGSVTFHCALGPEVANV---------AKFLCRQSSGE 277
>gi|216547575 Fas apoptotic inhibitory molecule 3 isoform a [Homo
sapiens]
Length = 390
Score = 67.4 bits (163), Expect = 1e-11
Identities = 35/87 (40%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 115 VSGEPGGAVTIQCHYAPSSVNRHQRKYWCRLGPPRWICQTIVSTNQYTHHRYRDRVALTD 174
V GE GG+VTI+C H R Y CR C T+VST + Y+ RV L
Sbjct: 25 VEGELGGSVTIKCPLP----EMHVRIYLCREMAGSGTCGTVVSTTNFIKAEYKGRVTLKQ 80
Query: 175 FPQRGLFVVRLSQLSPDDIGCYLCGIG 201
+P++ LF+V ++QL+ D G Y CG G
Sbjct: 81 YPRKNLFLVEVTQLTESDSGVYACGAG 107
>gi|4885641 Fas apoptotic inhibitory molecule 3 isoform a [Homo
sapiens]
Length = 390
Score = 67.4 bits (163), Expect = 1e-11
Identities = 35/87 (40%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 115 VSGEPGGAVTIQCHYAPSSVNRHQRKYWCRLGPPRWICQTIVSTNQYTHHRYRDRVALTD 174
V GE GG+VTI+C H R Y CR C T+VST + Y+ RV L
Sbjct: 25 VEGELGGSVTIKCPLP----EMHVRIYLCREMAGSGTCGTVVSTTNFIKAEYKGRVTLKQ 80
Query: 175 FPQRGLFVVRLSQLSPDDIGCYLCGIG 201
+P++ LF+V ++QL+ D G Y CG G
Sbjct: 81 YPRKNLFLVEVTQLTESDSGVYACGAG 107
>gi|56550061 leukocyte membrane antigen [Homo sapiens]
Length = 299
Score = 58.9 bits (141), Expect = 4e-09
Identities = 35/94 (37%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 108 SLKGSRLVSGEPGGAVTIQCHYAPSSVNRHQRKYWCRLGPPR-WICQTIVSTNQYTHHRY 166
+L R V+G GG++++QC Y +R KYWCR PP+ ++C IV T R
Sbjct: 17 ALSKCRTVAGPVGGSLSVQCPYEKE--HRTLNKYWCR--PPQIFLCDKIVETKGSAGKR- 71
Query: 167 RDRVALTDFPQRGLFVVRLSQLSPDDIGCYLCGI 200
RV++ D P F V L L+ +D G Y CG+
Sbjct: 72 NGRVSIRDSPANLSFTVTLENLTEEDAGTYWCGV 105
>gi|31324530 CD300e molecule [Homo sapiens]
Length = 205
Score = 56.6 bits (135), Expect = 2e-08
Identities = 33/93 (35%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Query: 108 SLKGSRLVSGEPGGAVTIQCHYAPSSVNRHQRKYWCRLGPPRWICQTIVSTNQYTHHRYR 167
SL G V+G G ++T+ C Y S+ + KYWCR G C++IV T
Sbjct: 17 SLTGPGSVTGTAGDSLTVWCQY--ESMYKGYNKYWCR-GQYDTSCESIVETKGEEKVERN 73
Query: 168 DRVALTDFPQRGLFVVRLSQLSPDDIGCYLCGI 200
RV++ D P+ F V + L+ DD G Y C I
Sbjct: 74 GRVSIRDHPEALAFTVTMQNLNEDDAGSYWCKI 106
>gi|5729776 CD300C antigen [Homo sapiens]
Length = 224
Score = 54.3 bits (129), Expect = 1e-07
Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 115 VSGEPGGAVTIQCHYAPSSVNRHQRKYWCRLGPPRWI-CQTIVSTNQYTHHRYRDRVALT 173
V+G GG++++QC Y +R K+WCR PP+ + C IV T R RV++
Sbjct: 31 VAGPVGGSLSVQCRYEKE--HRTLNKFWCR--PPQILRCDKIVETKGSAGKR-NGRVSIR 85
Query: 174 DFPQRGLFVVRLSQLSPDDIGCYLCGI 200
D P F V L L+ +D G Y CG+
Sbjct: 86 DSPANLSFTVTLENLTEEDAGTYWCGV 112
>gi|38455398 NK inhibitory receptor precursor [Homo sapiens]
Length = 290
Score = 53.5 bits (127), Expect = 2e-07
Identities = 37/131 (28%), Positives = 59/131 (45%), Gaps = 3/131 (2%)
Query: 101 SSFAAPNSLKGSRLVSGEPGGAVTIQCHYAPSSVNRHQRKYWCRLGPPRWICQTIVSTNQ 160
S ++ + G V+G G++T+QC Y S K+WCR G C+ +V T+
Sbjct: 14 SGYSIVTQITGPTTVNGLERGSLTVQCVYR--SGWETYLKWWCR-GAIWRDCKILVKTSG 70
Query: 161 YTHHRYRDRVALTDFPQRGLFVVRLSQLSPDDIGCYLCGIGSENNMLFLSMNLTISAVLF 220
RDRV++ D + F V + L D Y CGI N L +++ +TI
Sbjct: 71 SEQEVKRDRVSIKDNQKNRTFTVTMEDLMKTDADTYWCGIEKTGNDLGVTVQVTIDPAPV 130
Query: 221 QKMKAALGPWL 231
+ + + P L
Sbjct: 131 TQEETSSSPTL 141
>gi|21687218 CD300 molecule-like family member g [Homo sapiens]
Length = 332
Score = 49.3 bits (116), Expect = 3e-06
Identities = 30/94 (31%), Positives = 44/94 (46%), Gaps = 3/94 (3%)
Query: 108 SLKGSRLVSGEPGGAVTIQCHYAPSSVNRHQRKYWCRLGPPRWI-CQTIVSTNQYTHHRY 166
+L+G +SG G V++QC Y R RKYWCR G + C + +
Sbjct: 18 ALEGPEEISGFEGDTVSLQCTYREEL--RDHRKYWCRKGGILFSRCSGTIYAEEEGQETM 75
Query: 167 RDRVALTDFPQRGLFVVRLSQLSPDDIGCYLCGI 200
+ RV++ D Q +V L L+ D G Y CG+
Sbjct: 76 KGRVSIRDSRQELSLIVTLWNLTLQDAGEYWCGV 109
>gi|37700254 triggering receptor expressed on myeloid cells-like 4
[Homo sapiens]
Length = 200
Score = 48.9 bits (115), Expect = 5e-06
Identities = 27/98 (27%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Query: 119 PGGAVTIQCHYAPSSVNRHQRKYWCRLGPPRWICQTIVSTNQYTHHRYRDRVALTDFPQR 178
PG + +QC Y+P +Q K WC+ P + S+ +T + + + D P
Sbjct: 32 PGQTLLLQCQYSPKR-GPYQPKSWCQQTSPSRCTLLVTSSKPWTAVQ-KSHYTIWDKPNA 89
Query: 179 GLFVVRLSQLSPDDIGCYLCGI-GSENNMLFLSMNLTI 215
G F + + QL+ +D G Y CGI + N++ + N+++
Sbjct: 90 GFFNITMIQLTQNDSGFYWCGIYNASENIITVLRNISL 127
>gi|154759271 CD300 molecule-like family member b [Homo sapiens]
Length = 238
Score = 48.9 bits (115), Expect = 5e-06
Identities = 30/94 (31%), Positives = 43/94 (45%), Gaps = 5/94 (5%)
Query: 108 SLKGSRLVSGEPGGAVTIQCHYAPSSVNRHQRKYWCRLGPPRW-ICQTIVSTNQYTHHRY 166
S++G V G++T+QCHY K+WCR RW C+ ++ T
Sbjct: 54 SIQGPESVRAPEQGSLTVQCHYKQGWET--YIKWWCR--GVRWDTCKILIETRGSEQGEK 109
Query: 167 RDRVALTDFPQRGLFVVRLSQLSPDDIGCYLCGI 200
DRV++ D + F V + L DD Y CGI
Sbjct: 110 SDRVSIKDNQKDRTFTVTMEGLRRDDADVYWCGI 143
>gi|239756941 PREDICTED: similar to CD300C antigen [Homo sapiens]
Length = 328
Score = 48.5 bits (114), Expect = 6e-06
Identities = 32/95 (33%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 108 SLKGSRLVSGEPGGAVTIQCHYAPSSVNRHQRKYWCRLGPPRWICQTIVSTNQYTHHRYR 167
++ G V G G ++++QC Y + KYWCR P I +V T
Sbjct: 151 TVSGPSTVMGAVGESLSVQCRYEEKY--KTFNKYWCRQ-PCLPIWHEMVETGGSEGVVRS 207
Query: 168 DRVALTDFPQRGLFVVRLSQLSPDDIGCYLCGIGS 202
D+V +TD P F V L L+ DD G Y CGI +
Sbjct: 208 DQVIITDHPGDLTFTVTLENLTADDAGKYRCGIAT 242
>gi|239751445 PREDICTED: similar to CD300C antigen [Homo sapiens]
Length = 259
Score = 48.5 bits (114), Expect = 6e-06
Identities = 32/95 (33%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 108 SLKGSRLVSGEPGGAVTIQCHYAPSSVNRHQRKYWCRLGPPRWICQTIVSTNQYTHHRYR 167
++ G V G G ++++QC Y + KYWCR P I +V T
Sbjct: 82 TVSGPSTVMGAVGESLSVQCRYEEKY--KTFNKYWCRQ-PCLPIWHEMVETGGSEGVVRS 138
Query: 168 DRVALTDFPQRGLFVVRLSQLSPDDIGCYLCGIGS 202
D+V +TD P F V L L+ DD G Y CGI +
Sbjct: 139 DQVIITDHPGDLTFTVTLENLTADDAGKYRCGIAT 173
>gi|239745950 PREDICTED: similar to CD300C antigen [Homo sapiens]
Length = 328
Score = 48.5 bits (114), Expect = 6e-06
Identities = 32/95 (33%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 108 SLKGSRLVSGEPGGAVTIQCHYAPSSVNRHQRKYWCRLGPPRWICQTIVSTNQYTHHRYR 167
++ G V G G ++++QC Y + KYWCR P I +V T
Sbjct: 151 TVSGPSTVMGAVGESLSVQCRYEEKY--KTFNKYWCRQ-PCLPIWHEMVETGGSEGVVRS 207
Query: 168 DRVALTDFPQRGLFVVRLSQLSPDDIGCYLCGIGS 202
D+V +TD P F V L L+ DD G Y CGI +
Sbjct: 208 DQVIITDHPGDLTFTVTLENLTADDAGKYRCGIAT 242
>gi|153945782 natural cytotoxicity triggering receptor 2 [Homo
sapiens]
Length = 276
Score = 45.1 bits (105), Expect = 7e-05
Identities = 23/98 (23%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Query: 103 FAAPNSLKGSRLVSGEPGGAVTIQCHYAPSSVNRHQRKYWCRLGPPRWICQTIVSTNQYT 162
F + ++++ G +T++C Y P+ + +++K WC+ +C +V++++
Sbjct: 16 FPGSQAQSKAQVLQSVAGQTLTVRCQYPPTG-SLYEKKGWCKEASAL-VCIRLVTSSKPR 73
Query: 163 HHRYRDRVALTDFPQRGLFVVRLSQLSPDDIGCYLCGI 200
+ R + D P G F V ++ L +D G Y C I
Sbjct: 74 TMAWTSRFTIWDDPDAGFFTVTMTDLREEDSGHYWCRI 111
>gi|169646348 CD300 molecule-like family member d [Homo sapiens]
Length = 194
Score = 43.5 bits (101), Expect = 2e-04
Identities = 37/128 (28%), Positives = 56/128 (43%), Gaps = 5/128 (3%)
Query: 89 LRPSSPLCWREESSFAAPNSLKGSRLVSGEPGGAVTIQCHYAPSSVNRHQRKYWCRLGPP 148
L PS L S AA + G V+G G++T+QC Y S K+ C+ G
Sbjct: 3 LSPSLLLLILPGYSIAA--KITGPTTVNGSEQGSLTVQCAYG--SGWETYLKWRCQ-GAD 57
Query: 149 RWICQTIVSTNQYTHHRYRDRVALTDFPQRGLFVVRLSQLSPDDIGCYLCGIGSENNMLF 208
C +V TN ++RV++ D + +F V + L DD Y CG L
Sbjct: 58 WNYCNILVKTNGSEQEVKKNRVSIRDNQKNHVFTVTMENLKRDDADSYWCGTERPGIDLG 117
Query: 209 LSMNLTIS 216
+ + +TI+
Sbjct: 118 VKVQVTIN 125
>gi|9507203 triggering receptor expressed on myeloid cells 2
precursor [Homo sapiens]
Length = 230
Score = 42.4 bits (98), Expect = 4e-04
Identities = 27/86 (31%), Positives = 38/86 (44%), Gaps = 5/86 (5%)
Query: 117 GEPGGAVTIQCHYAPSSVNRHQRKYWCRLGPPRWICQTIVSTNQYTH----HRYRDRVAL 172
G G ++ + C Y S + +RK WCR + CQ +VST+ R+ A+
Sbjct: 26 GVAGQSLQVSCPY-DSMKHWGRRKAWCRQLGEKGPCQRVVSTHNLWLLSFLRRWNGSTAI 84
Query: 173 TDFPQRGLFVVRLSQLSPDDIGCYLC 198
TD G + L L P D G Y C
Sbjct: 85 TDDTLGGTLTITLRNLQPHDAGLYQC 110
>gi|153085429 hepatitis A virus cellular receptor 1 [Homo sapiens]
Length = 364
Score = 40.4 bits (93), Expect = 0.002
Identities = 32/113 (28%), Positives = 51/113 (45%), Gaps = 10/113 (8%)
Query: 107 NSLKGSRLVSGEPGGAVTIQCHYAPSSVNRHQRKYWCRLGPPRWICQTIVSTNQYTHHRY 166
+S+ GS V GE G +VT+ CHY+ + + + C L + CQ + TH Y
Sbjct: 16 DSVAGSVKVGGEAGPSVTLPCHYSGAVTSMCWNRGSCSL----FTCQNGIVWTNGTHVTY 71
Query: 167 RDRV---ALTDFPQRGLFVVRLSQLSPDDIGCYLCGIGSENNMLFLSMNLTIS 216
R L D +R + + + + D G Y C + E+ F M +T+S
Sbjct: 72 RKDTRYKLLGDLSRRDVSLT-IENTAVSDSGVYCCRV--EHRGWFNDMKITVS 121
>gi|153085427 hepatitis A virus cellular receptor 1 [Homo sapiens]
Length = 364
Score = 40.4 bits (93), Expect = 0.002
Identities = 32/113 (28%), Positives = 51/113 (45%), Gaps = 10/113 (8%)
Query: 107 NSLKGSRLVSGEPGGAVTIQCHYAPSSVNRHQRKYWCRLGPPRWICQTIVSTNQYTHHRY 166
+S+ GS V GE G +VT+ CHY+ + + + C L + CQ + TH Y
Sbjct: 16 DSVAGSVKVGGEAGPSVTLPCHYSGAVTSMCWNRGSCSL----FTCQNGIVWTNGTHVTY 71
Query: 167 RDRV---ALTDFPQRGLFVVRLSQLSPDDIGCYLCGIGSENNMLFLSMNLTIS 216
R L D +R + + + + D G Y C + E+ F M +T+S
Sbjct: 72 RKDTRYKLLGDLSRRDVSLT-IENTAVSDSGVYCCRV--EHRGWFNDMKITVS 121
>gi|30794266 triggering receptor expressed on myeloid cells-like 1
[Homo sapiens]
Length = 311
Score = 38.9 bits (89), Expect = 0.005
Identities = 34/115 (29%), Positives = 49/115 (42%), Gaps = 13/115 (11%)
Query: 109 LKGSRLVSGEP-------GGAVTIQCHYAPSSVNRHQRKYWCRLGPPRWICQTIVSTNQY 161
L+G +V P G ++ +QCHY V +K WCR P CQ +VS+
Sbjct: 13 LEGQGIVGSLPEVLQAPVGSSILVQCHYRLQDVK--AQKVWCRFLPEG--CQPLVSSAVD 68
Query: 162 THHRYRDRVALTDFPQRGLFVVRLSQLSPDDIGCYLCGI-GSENNMLFLSMNLTI 215
R LTD GL V + L +D G Y C + G+ + ++L I
Sbjct: 69 RRAPAGRRTFLTDL-GGGLLQVEMVTLQEEDAGEYGCMVDGARGPQILHRVSLNI 122
>gi|130978672 adenosine A3 receptor isoform 3 [Homo sapiens]
Length = 266
Score = 35.4 bits (80), Expect = 0.052
Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 10/74 (13%)
Query: 127 CHYAPSSVNRHQRKYWCRLGPPRWICQTIVSTNQYTHHRYRDRVALTDFPQRGLFVVRLS 186
C+Y ++ ++ KYWCR G R C I + T+H VAL D + +V +S
Sbjct: 93 CNY--NAHYKNHPKYWCR-GYFRDYCNIIAFSPNSTNH-----VALRDTGNQ--LIVTMS 142
Query: 187 QLSPDDIGCYLCGI 200
L+ +D G Y CGI
Sbjct: 143 CLTKEDTGWYWCGI 156
>gi|46559769 adenosine A3 receptor isoform 1 [Homo sapiens]
Length = 347
Score = 35.4 bits (80), Expect = 0.052
Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 10/74 (13%)
Query: 127 CHYAPSSVNRHQRKYWCRLGPPRWICQTIVSTNQYTHHRYRDRVALTDFPQRGLFVVRLS 186
C+Y ++ ++ KYWCR G R C I + T+H VAL D + +V +S
Sbjct: 174 CNY--NAHYKNHPKYWCR-GYFRDYCNIIAFSPNSTNH-----VALRDTGNQ--LIVTMS 223
Query: 187 QLSPDDIGCYLCGI 200
L+ +D G Y CGI
Sbjct: 224 CLTKEDTGWYWCGI 237
>gi|4502659 sialic acid binding Ig-like lectin 5 [Homo sapiens]
Length = 551
Score = 34.7 bits (78), Expect = 0.088
Identities = 26/76 (34%), Positives = 32/76 (42%), Gaps = 6/76 (7%)
Query: 47 PLFLILCLLQGSSFALPQKR-PHPRWLWEGSLPSRTHLRAMGTLRPSSPLCWREESSFAA 105
PL + L S ++LPQ P W EG H R RP+ LCWR E
Sbjct: 319 PLGFLQIFLNLSVYSLPQLLGPSCSWEAEG-----LHCRCSFRARPAPSLCWRLEEKPLE 373
Query: 106 PNSLKGSRLVSGEPGG 121
NS +GS V+ G
Sbjct: 374 GNSSQGSFKVNSSSAG 389
>gi|38372931 brevican isoform 2 [Homo sapiens]
Length = 671
Score = 33.5 bits (75), Expect = 0.20
Identities = 33/102 (32%), Positives = 46/102 (45%), Gaps = 11/102 (10%)
Query: 109 LKGSRLVSGEPGGAVTIQCHY-----APS--SVNRHQRKYWCRLGPPRWICQTIVS--TN 159
+ G + G GGA+TI CH PS +V R W L R + +V+
Sbjct: 39 IAGDAPLQGVLGGALTIPCHVHYLRPPPSRRAVLGSPRVKWTFLSRGR-EAEVLVARGVR 97
Query: 160 QYTHHRYRDRVALTDFPQRGLFV-VRLSQLSPDDIGCYLCGI 200
+ YR RVAL +P V + LS+L P+D G Y C +
Sbjct: 98 VKVNEAYRFRVALPAYPASLTDVSLALSELRPNDSGIYRCEV 139
>gi|38372935 brevican isoform 1 [Homo sapiens]
Length = 911
Score = 33.5 bits (75), Expect = 0.20
Identities = 33/102 (32%), Positives = 46/102 (45%), Gaps = 11/102 (10%)
Query: 109 LKGSRLVSGEPGGAVTIQCHY-----APS--SVNRHQRKYWCRLGPPRWICQTIVS--TN 159
+ G + G GGA+TI CH PS +V R W L R + +V+
Sbjct: 39 IAGDAPLQGVLGGALTIPCHVHYLRPPPSRRAVLGSPRVKWTFLSRGR-EAEVLVARGVR 97
Query: 160 QYTHHRYRDRVALTDFPQRGLFV-VRLSQLSPDDIGCYLCGI 200
+ YR RVAL +P V + LS+L P+D G Y C +
Sbjct: 98 VKVNEAYRFRVALPAYPASLTDVSLALSELRPNDSGIYRCEV 139
>gi|42544177 complement component (3d/Epstein Barr virus) receptor 2
isoform 2 [Homo sapiens]
Length = 1033
Score = 31.2 bits (69), Expect = 0.98
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 6/48 (12%)
Query: 85 AMGTLRPSSPLCWREESSFAAPNSLKGSR----LVSGEPGGAVTIQCH 128
A GT PS+P+C E+ A PN L G + +V +PG ++ C+
Sbjct: 395 AQGTWEPSAPVC--EKECQAPPNILNGQKEDRHMVRFDPGTSIKYSCN 440
>gi|54792123 complement component (3d/Epstein Barr virus) receptor 2
isoform 1 [Homo sapiens]
Length = 1092
Score = 31.2 bits (69), Expect = 0.98
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 6/48 (12%)
Query: 85 AMGTLRPSSPLCWREESSFAAPNSLKGSR----LVSGEPGGAVTIQCH 128
A GT PS+P+C E+ A PN L G + +V +PG ++ C+
Sbjct: 395 AQGTWEPSAPVC--EKECQAPPNILNGQKEDRHMVRFDPGTSIKYSCN 440
>gi|8924262 triggering receptor expressed on myeloid cells 1 [Homo
sapiens]
Length = 234
Score = 31.2 bits (69), Expect = 0.98
Identities = 29/103 (28%), Positives = 43/103 (41%), Gaps = 8/103 (7%)
Query: 120 GGAVTIQCHYAPSSVNRHQRKYWC-RLG--PPRWICQTIVSTNQYTHHRYRDRVALTDFP 176
G + ++C Y Q+ + R G P C S N +H R+ L D+
Sbjct: 34 GQTLDVKCDYTLEKFASSQKAWQIIRDGEMPKTLACTERPSKN--SHPVQVGRIILEDYH 91
Query: 177 QRGLFVVRLSQLSPDDIGCYLCGI---GSENNMLFLSMNLTIS 216
GL VR+ L +D G Y C I E +MLF + L ++
Sbjct: 92 DHGLLRVRMVNLQVEDSGLYQCVIYQPPKEPHMLFDRIRLVVT 134
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.323 0.138 0.466
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,103,607
Number of Sequences: 37866
Number of extensions: 597137
Number of successful extensions: 1358
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 1296
Number of HSP's gapped (non-prelim): 63
length of query: 265
length of database: 18,247,518
effective HSP length: 100
effective length of query: 165
effective length of database: 14,460,918
effective search space: 2386051470
effective search space used: 2386051470
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.