Guide to the Human Genome
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Name: CD300E Sequence: fasta or formatted (205aa) NCBI GI: 31324530
Description:

CD300e molecule

Referenced in:

Additional Immunoglobulin-related Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.4          9           1
 C cysteine            2.9          6           1
 D aspartate           3.9          8           2
 E glutamate           4.4          9           2
 F phenylalanine       2.4          5           1
 G glycine             7.3         15           1
 H histidine           1.5          3           1
 I isoleucine          2.4          5           1
 K lysine              2.9          6           1
 L leucine            13.2         27           4
 M methionine          2.0          4           1
 N asparagine          3.9          8           1
 P proline             7.3         15           2
 Q glutamine           2.9          6           1
 R arginine            5.9         12           2
 S serine              8.8         18           2
 T threonine           7.8         16           2
 V valine              8.8         18           2
 W tryptophan          3.9          8           1
 Y tyrosine            3.4          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   CD300e molecule 
CD300C                0.347   CD300C antigen 
LOC100130520          0.310   PREDICTED: similar to CD300C antigen 
LOC100130520          0.310   PREDICTED: similar to CD300C antigen 
LOC100130520          0.310   PREDICTED: similar to CD300C antigen 
CD300LD               0.271   CD300 molecule-like family member d 
CD300A                0.266   leukocyte membrane antigen 
CD300LB               0.251   CD300 molecule-like family member b 
CD300LF               0.175   NK inhibitory receptor precursor 
CD300LG               0.135   CD300 molecule-like family member g 
NCR2                  0.096   natural cytotoxicity triggering receptor 2 
PIGR                  0.094   polymeric immunoglobulin receptor precursor 
FCAMR                 0.079   Fc receptor, IgA, IgM, high affinity isoform 2 [Hom...
FCAMR                 0.079   Fc receptor, IgA, IgM, high affinity isoform 1 [Hom...
FCAMR                 0.079   Fc receptor, IgA, IgM, high affinity isoform 1 [Hom...
ADORA3                0.076   adenosine A3 receptor isoform 3 
ADORA3                0.076   adenosine A3 receptor isoform 1 
FAIM3                 0.071   Fas apoptotic inhibitory molecule 3 isoform a [Homo...
FAIM3                 0.071   Fas apoptotic inhibitory molecule 3 isoform a 
TREML4                0.069   triggering receptor expressed on myeloid cells-like ...
TREM2                 0.062   triggering receptor expressed on myeloid cells 2 prec...
TREML2                0.047   triggering receptor expressed on myeloid cells-like...
TIMD4                 0.037   T-cell immunoglobulin and mucin domain containing 4...
TIMD4                 0.037   T-cell immunoglobulin and mucin domain containing 4...
TREML1                0.037   triggering receptor expressed on myeloid cells-like ...
HAVCR1                0.034   hepatitis A virus cellular receptor 1 
HAVCR1                0.034   hepatitis A virus cellular receptor 1 
SIGLEC1               0.025   sialoadhesin precursor 
SIRPB1                0.022   signal-regulatory protein beta 1 isoform 1 precurso...
SIRPB1                0.022   signal-regulatory protein beta 1 isoform 2 precurso...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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