HAVCR1 5229

Name: HAVCR1	Sequence: fasta or formatted (364aa)		NCBI GI: 153085427
Description: hepatitis A virus cellular receptor 1		Referenced in: Additional Immunoglobulin-related Receptors Kidney Mucins Viral Receptors
Other entries for this name: alt mRNA [364aa] hepatitis A virus cellular receptor 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.4 16 1 C cysteine 1.9 7 2 D aspartate 3.0 11 1 E glutamate 3.8 14 1 F phenylalanine 1.9 7 2 G glycine 4.7 17 2 H histidine 2.2 8 1 I isoleucine 4.7 17 2 K lysine 3.3 12 2 L leucine 8.0 29 2 M methionine 1.9 7 1 N asparagine 3.8 14 3 P proline 7.1 26 2 Q glutamine 3.3 12 2 R arginine 3.0 11 2 S serine 9.6 35 2 T threonine 18.1 66 4 V valine 11.3 41 2 W tryptophan 1.1 4 1 Y tyrosine 2.7 10 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 hepatitis A virus cellular receptor 1 HAVCR1 1.000 hepatitis A virus cellular receptor 1 TIMD4 0.164 T-cell immunoglobulin and mucin domain containing 4... TIMD4 0.159 T-cell immunoglobulin and mucin domain containing 4... HAVCR2 0.110 T cell immunoglobulin mucin 3 MUC2 0.095 mucin 2 precursor LOC730474 0.087 PREDICTED: hypothetical protein, partial LOC730474 0.084 PREDICTED: hypothetical protein LOC100294470 0.084 PREDICTED: hypothetical protein, partial LOC100294420 0.083 PREDICTED: similar to mucin 2 LOC284297 0.077 hypothetical protein LOC284297 LOC100131514 0.064 PREDICTED: similar to intestinal mucin MUC3B LOC100131514 0.060 PREDICTED: similar to hCG1747327, partial MUC7 0.054 mucin 7, secreted precursor PRG4 0.054 proteoglycan 4 isoform D PRG4 0.054 proteoglycan 4 isoform C PRG4 0.054 proteoglycan 4 isoform B PRG4 0.054 proteoglycan 4 isoform A MUC7 0.054 mucin 7, secreted precursor MUC7 0.054 mucin 7, secreted precursor MUC6 0.051 mucin 6, gastric LOC100132635 0.050 PREDICTED: similar to mucin 5, partial LOC100294236 0.050 PREDICTED: similar to diffuse panbronchiolitis crit... FAM65A 0.047 hypothetical protein LOC79567 MUC17 0.047 mucin 17 MUC5AC 0.046 mucin 5AC MUC5B 0.046 mucin 5, subtype B, tracheobronchial MUC3A 0.044 PREDICTED: mucin 3A, intestinal LOC100294249 0.044 PREDICTED: hypothetical protein XP_002344067 LOC732156 0.044 PREDICTED: similar to Mucin-3A Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.