Guide to the Human Genome
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Name: PPM1M Sequence: fasta or formatted (247aa) NCBI GI: 171460934
Description:

protein phosphatase 1M isoform b

Referenced in:

Serine / Threonine Protein Phosphatases

Other entries for this name:
alt prot [298aa] protein phosphatase 1M isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.9         12           1
 C cysteine            0.4          1           1
 D aspartate           7.7         19           2
 E glutamate           6.5         16           2
 F phenylalanine       4.0         10           1
 G glycine             7.3         18           2
 H histidine           3.2          8           2
 I isoleucine          2.8          7           1
 K lysine              3.6          9           1
 L leucine            13.8         34           2
 M methionine          2.0          5           1
 N asparagine          1.6          4           1
 P proline             4.0         10           1
 Q glutamine           7.7         19           2
 R arginine            6.9         17           2
 S serine              7.3         18           2
 T threonine           4.0         10           1
 V valine              8.9         22           3
 W tryptophan          1.2          3           1
 Y tyrosine            2.0          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   protein phosphatase 1M isoform b 
PPM1M                 1.000   protein phosphatase 1M isoform a 
PPM1H                 0.528   protein phosphatase 1H (PP2C domain containing) [Ho...
PPM1J                 0.468   protein phosphatase 1J (PP2C domain containing) [Hom...
PPM1B                 0.064   protein phosphatase 1B isoform 5 
PPM1B                 0.064   protein phosphatase 1B isoform 4 
PPM1B                 0.064   protein phosphatase 1B isoform 2 
PPM1B                 0.064   protein phosphatase 1B isoform 1 
PPM1L                 0.062   protein phosphatase 1 (formerly 2C)-like 
FLJ40125              0.056   protein phosphatase 1B-like 
PPM1A                 0.051   protein phosphatase 1A isoform 1 
PPM1A                 0.051   protein phosphatase 1A isoform 2 
PPM1A                 0.051   protein phosphatase 1A isoform 3 
PPM1G                 0.041   protein phosphatase 1G 
PPM1G                 0.041   protein phosphatase 1G 
PDP1                  0.041   pyruvate dehyrogenase phosphatase catalytic subunit ...
PDP2                  0.041   pyruvate dehydrogenase phosphatase isoenzyme 2 [Homo...
PDP1                  0.041   pyruvate dehyrogenase phosphatase catalytic subunit...
PDP1                  0.041   pyruvate dehyrogenase phosphatase catalytic subunit...
PDP1                  0.041   pyruvate dehyrogenase phosphatase catalytic subunit...
PDP1                  0.041   pyruvate dehyrogenase phosphatase catalytic subunit...
ILKAP                 0.041   integrin-linked kinase-associated protein phosphatas...
PPM1F                 0.030   protein phosphatase 1F 
MAP3K7IP1             0.028   mitogen-activated protein kinase kinase kinase 7 inte...
MAP3K7IP1             0.028   mitogen-activated protein kinase kinase kinase 7 int...
PPM1K                 0.026   protein phosphatase 1K (PP2C domain containing) [Ho...
PPM1E                 0.019   protein phosphatase 1E 
ANK1                  0.006   ankyrin 1 isoform 9 
ANK1                  0.006   ankyrin 1 isoform 1 
ANK1                  0.006   ankyrin 1 isoform 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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