Guide to the Human Genome
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Name: ANTXR1 Sequence: fasta or formatted (368aa) NCBI GI: 16933551
Description:

anthrax toxin receptor 1 isoform 2 precursor

Referenced in:

Cardiovascular System
Additional Genes in Development

Other entries for this name:
alt prot [564aa] anthrax toxin receptor 1 isoform 1 precursor
alt prot [333aa] anthrax toxin receptor 1 isoform 3 precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.3         27           2
 C cysteine            2.7         10           2
 D aspartate           4.6         17           1
 E glutamate           7.6         28           2
 F phenylalanine       5.4         20           2
 G glycine             7.3         27           2
 H histidine           2.4          9           2
 I isoleucine          7.9         29           2
 K lysine              4.1         15           2
 L leucine            11.1         41           3
 M methionine          1.6          6           1
 N asparagine          3.0         11           1
 P proline             3.5         13           4
 Q glutamine           3.8         14           1
 R arginine            5.2         19           2
 S serine              7.1         26           3
 T threonine           4.6         17           3
 V valine              6.2         23           3
 W tryptophan          1.4          5           2
 Y tyrosine            3.0         11           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   anthrax toxin receptor 1 isoform 2 precursor 
ANTXR1                0.990   anthrax toxin receptor 1 isoform 1 precursor 
ANTXR1                0.858   anthrax toxin receptor 1 isoform 3 precursor 
ANTXR2                0.485   anthrax toxin receptor 2 isoform 2 
ANTXR2                0.485   anthrax toxin receptor 2 isoform 1 
ITGAD                 0.043   integrin, alpha D precursor 
COL6A6                0.042   collagen type VI alpha 6 
COL22A1               0.039   collagen, type XXII, alpha 1 
COL29A1               0.032   collagen, type XXIX, alpha 1 
COL20A1               0.022   collagen, type XX, alpha 1 
COL7A1                0.021   alpha 1 type VII collagen precursor 
MATN2                 0.020   matrilin 2 isoform b precursor 
MATN2                 0.020   matrilin 2 isoform a precursor 
MATN1                 0.017   matrilin 1, cartilage matrix protein 
VWA1                  0.015   von Willebrand factor A domain containing 1 isoform ...
MATN4                 0.014   matrilin 4 isoform 3 precursor 
MATN4                 0.014   matrilin 4 isoform 2 precursor 
MATN4                 0.014   matrilin 4 isoform 1 precursor 
ITGA11                0.014   integrin, alpha 11 precursor 
EP400                 0.011   E1A binding protein p400 
GRLF1                 0.007   glucocorticoid receptor DNA binding factor 1 
GRAMD4                0.007   death-inducing-protein 
AOX1                  0.006   aldehyde oxidase 1 
ITGB4                 0.006   integrin beta 4 isoform 2 precursor 
ITGB4                 0.006   integrin beta 4 isoform 1 precursor 
ITGB4                 0.006   integrin beta 4 isoform 3 precursor 
ARF5                  0.006   ADP-ribosylation factor 5 
HERC6                 0.006   hect domain and RLD 6 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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