MATN4 3532

Name: MATN4	Sequence: fasta or formatted (581aa)		NCBI GI: 13699830
Description: matrilin 4 isoform 1 precursor		Referenced in: Extracellular Matrix
Other entries for this name: alt prot [540aa] matrilin 4 isoform 2 precursor alt prot [499aa] matrilin 4 isoform 3 precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.7 45 2 C cysteine 4.3 25 1 D aspartate 4.5 26 2 E glutamate 7.9 46 2 F phenylalanine 4.1 24 1 G glycine 8.4 49 2 H histidine 2.8 16 2 I isoleucine 2.8 16 1 K lysine 1.2 7 1 L leucine 10.3 60 5 M methionine 2.1 12 1 N asparagine 2.4 14 1 P proline 4.8 28 2 Q glutamine 6.0 35 2 R arginine 8.6 50 2 S serine 6.5 38 2 T threonine 3.8 22 1 V valine 9.5 55 1 W tryptophan 0.5 3 1 Y tyrosine 1.7 10 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 matrilin 4 isoform 1 precursor MATN4 0.902 matrilin 4 isoform 2 precursor MATN4 0.759 matrilin 4 isoform 3 precursor MATN2 0.291 matrilin 2 isoform b precursor MATN2 0.282 matrilin 2 isoform a precursor MATN3 0.248 matrilin 3 precursor MATN1 0.220 matrilin 1, cartilage matrix protein COL12A1 0.163 collagen, type XII, alpha 1 long isoform precursor [... VWA2 0.124 von Willebrand factor A domain containing 2 COL22A1 0.108 collagen, type XXII, alpha 1 COL12A1 0.095 collagen, type XII, alpha 1 short isoform precursor ... COL14A1 0.095 collagen, type XIV, alpha 1 COL21A1 0.090 collagen, type XXI, alpha 1 precursor MEGF6 0.083 EGF-like-domain, multiple 3 COL20A1 0.081 collagen, type XX, alpha 1 VIT 0.074 vitrin COL6A6 0.073 collagen type VI alpha 6 COL29A1 0.072 collagen, type XXIX, alpha 1 COL7A1 0.072 alpha 1 type VII collagen precursor EGF 0.069 epidermal growth factor (beta-urogastrone) COL6A3 0.068 alpha 3 type VI collagen isoform 1 precursor COCH 0.068 cochlin precursor COCH 0.068 cochlin precursor VWA1 0.067 von Willebrand factor A domain containing 1 isoform ... SCUBE1 0.067 signal peptide, CUB domain, EGF-like 1 COL28A1 0.064 collagen, type XXVIII precursor FBLN5 0.063 fibulin 5 precursor SCUBE3 0.062 signal peptide, CUB domain, EGF-like 3 COL6A3 0.062 alpha 3 type VI collagen isoform 5 precursor COL6A3 0.062 alpha 3 type VI collagen isoform 2 precursor Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.