Guide to the Human Genome
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Name: LOC100131165 Sequence: fasta or formatted (319aa) NCBI GI: 169213703
Description:

PREDICTED: hypothetical protein

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.3         36           2
 C cysteine            1.6          5           1
 D aspartate           1.9          6           1
 E glutamate           0.6          2           1
 F phenylalanine       5.3         17           1
 G glycine             5.6         18           1
 H histidine           2.2          7           1
 I isoleucine          0.9          3           1
 K lysine              1.3          4           1
 L leucine            15.4         49           2
 M methionine          0.3          1           1
 N asparagine          0.3          1           1
 P proline            18.2         58           3
 Q glutamine           1.9          6           1
 R arginine            9.1         29           2
 S serine             14.4         46           3
 T threonine           2.8          9           1
 V valine              3.1         10           1
 W tryptophan          2.8          9           2
 Y tyrosine            0.9          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: hypothetical protein 
FLJ22184              0.052   PREDICTED: hypothetical protein LOC80164 
SETD1B                0.052   SET domain containing 1B 
FLJ22184              0.050   PREDICTED: hypothetical protein FLJ22184 
FLJ22184              0.047   PREDICTED: hypothetical protein FLJ22184 
YLPM1                 0.042   YLP motif containing 1 
NACA                  0.042   nascent polypeptide-associated complex alpha subuni...
MBD6                  0.042   methyl-CpG binding domain protein 6 
SH3BP1                0.041   SH3-domain binding protein 1 
WASF2                 0.038   WAS protein family, member 2 
LOC100131880          0.038   PREDICTED: hypothetical protein 
GNAS                  0.036   GNAS complex locus alex 
BCORL1                0.034   BCL6 co-repressor-like 1 
KIAA1543              0.034   NEZHA isoform 2 
KIAA1543              0.034   NEZHA isoform 1 
TTBK1                 0.033   tau tubulin kinase 1 
RICH2                 0.033   Rho GTPase-activating protein RICH2 
SRCAP                 0.033   Snf2-related CBP activator protein 
C2orf71               0.033   hypothetical protein LOC388939 
TRIO                  0.031   triple functional domain (PTPRF interacting) 
WIPF3                 0.031   WAS/WASL interacting protein family, member 3 [Homo...
BAT2D1                0.031   HBxAg transactivated protein 2 
MLL2                  0.031   myeloid/lymphoid or mixed-lineage leukemia 2 
SYN3                  0.030   synapsin III isoform IIIg 
SYN3                  0.030   synapsin III isoform IIIa 
PRRT3                 0.030   proline-rich transmembrane protein 3 
WNK2                  0.028   WNK lysine deficient protein kinase 2 
MYO15A                0.028   myosin XV 
MLXIPL                0.028   Williams Beuren syndrome chromosome region 14 isofor...
MLXIPL                0.028   Williams Beuren syndrome chromosome region 14 isofor...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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