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Search of human proteins with 169213573
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169213573 PREDICTED: hypothetical protein [Homo sapiens]
(142 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169213800 PREDICTED: hypothetical protein [Homo sapiens] 301 9e-83
gi|169214229 PREDICTED: hypothetical protein [Homo sapiens] 301 9e-83
gi|169213573 PREDICTED: hypothetical protein [Homo sapiens] 301 9e-83
gi|62243734 signal transducing adaptor family member 2 isoform 1... 59 1e-09
gi|28212280 hypothetical protein LOC283579 [Homo sapiens] 54 6e-08
gi|169216486 PREDICTED: hCG_1742852 [Homo sapiens] 52 1e-07
gi|169216528 PREDICTED: hCG_1742852 [Homo sapiens] 52 1e-07
gi|239747074 PREDICTED: hypothetical protein XP_002343911 [Homo ... 51 3e-07
gi|169216761 PREDICTED: hCG_1742852 [Homo sapiens] 51 3e-07
gi|194473995 zinc finger protein 195 isoform 2 [Homo sapiens] 51 4e-07
gi|194473688 zinc finger protein 195 isoform 1 [Homo sapiens] 51 4e-07
gi|217035093 cyclic nucleotide gated channel alpha 1 isoform 1 [... 50 6e-07
gi|63999355 chromosome 9 open reading frame 37 [Homo sapiens] 49 2e-06
gi|237858668 hypothetical protein LOC123207 isoform d [Homo sapi... 48 2e-06
gi|33188429 tetratricopeptide repeat protein isoform 1 [Homo sap... 46 1e-05
gi|195963398 suppressor of G2 allele of SKP1 isoform a [Homo sap... 44 3e-05
gi|169213867 PREDICTED: hypothetical protein LOC100128682 [Homo ... 44 6e-05
gi|169214305 PREDICTED: hypothetical protein LOC100128682 [Homo ... 44 6e-05
gi|169213267 PREDICTED: hypothetical protein LOC100128682 [Homo ... 44 6e-05
gi|29029530 sulfotransferase family, cytosolic, 1C, member 1 iso... 43 8e-05
gi|54112407 protein kinase CHK2 isoform c [Homo sapiens] 43 1e-04
gi|4506473 v-rel reticuloendotheliosis viral oncogene homolog [H... 42 1e-04
gi|66277202 podocalyxin-like isoform 1 precursor [Homo sapiens] 42 2e-04
gi|61744479 solute carrier family 3, member 2 isoform d [Homo sa... 41 3e-04
gi|65506891 solute carrier family 3, member 2 isoform c [Homo sa... 41 3e-04
gi|239751420 PREDICTED: similar to hCG2039376 [Homo sapiens] 40 7e-04
gi|61744475 solute carrier family 3, member 2 isoform a [Homo sa... 40 7e-04
gi|224494572 hypothetical protein LOC401082 [Homo sapiens] 40 8e-04
gi|61744477 solute carrier family 3, member 2 isoform b [Homo sa... 40 8e-04
gi|205277366 hypothetical protein LOC201158 isoform 1 [Homo sapi... 39 0.001
>gi|169213800 PREDICTED: hypothetical protein [Homo sapiens]
Length = 142
Score = 301 bits (772), Expect = 9e-83
Identities = 142/142 (100%), Positives = 142/142 (100%)
Query: 1 MGLYHVGQAGLELLTSSDPPTSASQNAEITGVSHRAQSKAHNLQRKLRLSHKSSPPCTYT 60
MGLYHVGQAGLELLTSSDPPTSASQNAEITGVSHRAQSKAHNLQRKLRLSHKSSPPCTYT
Sbjct: 1 MGLYHVGQAGLELLTSSDPPTSASQNAEITGVSHRAQSKAHNLQRKLRLSHKSSPPCTYT 60
Query: 61 QHAGGVDSHPLTQDMCVIVNVIARPFDKCNCDIYLGLASELFVVSWVQLTVPYHWIQTLG 120
QHAGGVDSHPLTQDMCVIVNVIARPFDKCNCDIYLGLASELFVVSWVQLTVPYHWIQTLG
Sbjct: 61 QHAGGVDSHPLTQDMCVIVNVIARPFDKCNCDIYLGLASELFVVSWVQLTVPYHWIQTLG 120
Query: 121 NVILFCLDTAHRGHCDIAGHCT 142
NVILFCLDTAHRGHCDIAGHCT
Sbjct: 121 NVILFCLDTAHRGHCDIAGHCT 142
>gi|169214229 PREDICTED: hypothetical protein [Homo sapiens]
Length = 142
Score = 301 bits (772), Expect = 9e-83
Identities = 142/142 (100%), Positives = 142/142 (100%)
Query: 1 MGLYHVGQAGLELLTSSDPPTSASQNAEITGVSHRAQSKAHNLQRKLRLSHKSSPPCTYT 60
MGLYHVGQAGLELLTSSDPPTSASQNAEITGVSHRAQSKAHNLQRKLRLSHKSSPPCTYT
Sbjct: 1 MGLYHVGQAGLELLTSSDPPTSASQNAEITGVSHRAQSKAHNLQRKLRLSHKSSPPCTYT 60
Query: 61 QHAGGVDSHPLTQDMCVIVNVIARPFDKCNCDIYLGLASELFVVSWVQLTVPYHWIQTLG 120
QHAGGVDSHPLTQDMCVIVNVIARPFDKCNCDIYLGLASELFVVSWVQLTVPYHWIQTLG
Sbjct: 61 QHAGGVDSHPLTQDMCVIVNVIARPFDKCNCDIYLGLASELFVVSWVQLTVPYHWIQTLG 120
Query: 121 NVILFCLDTAHRGHCDIAGHCT 142
NVILFCLDTAHRGHCDIAGHCT
Sbjct: 121 NVILFCLDTAHRGHCDIAGHCT 142
>gi|169213573 PREDICTED: hypothetical protein [Homo sapiens]
Length = 142
Score = 301 bits (772), Expect = 9e-83
Identities = 142/142 (100%), Positives = 142/142 (100%)
Query: 1 MGLYHVGQAGLELLTSSDPPTSASQNAEITGVSHRAQSKAHNLQRKLRLSHKSSPPCTYT 60
MGLYHVGQAGLELLTSSDPPTSASQNAEITGVSHRAQSKAHNLQRKLRLSHKSSPPCTYT
Sbjct: 1 MGLYHVGQAGLELLTSSDPPTSASQNAEITGVSHRAQSKAHNLQRKLRLSHKSSPPCTYT 60
Query: 61 QHAGGVDSHPLTQDMCVIVNVIARPFDKCNCDIYLGLASELFVVSWVQLTVPYHWIQTLG 120
QHAGGVDSHPLTQDMCVIVNVIARPFDKCNCDIYLGLASELFVVSWVQLTVPYHWIQTLG
Sbjct: 61 QHAGGVDSHPLTQDMCVIVNVIARPFDKCNCDIYLGLASELFVVSWVQLTVPYHWIQTLG 120
Query: 121 NVILFCLDTAHRGHCDIAGHCT 142
NVILFCLDTAHRGHCDIAGHCT
Sbjct: 121 NVILFCLDTAHRGHCDIAGHCT 142
>gi|62243734 signal transducing adaptor family member 2 isoform 1
[Homo sapiens]
Length = 449
Score = 58.9 bits (141), Expect = 1e-09
Identities = 28/33 (84%), Positives = 30/33 (90%)
Query: 2 GLYHVGQAGLELLTSSDPPTSASQNAEITGVSH 34
G +HV QAGLELLTSSDPPTSASQ+A ITGVSH
Sbjct: 361 GFHHVAQAGLELLTSSDPPTSASQSAGITGVSH 393
>gi|28212280 hypothetical protein LOC283579 [Homo sapiens]
Length = 122
Score = 53.5 bits (127), Expect = 6e-08
Identities = 27/43 (62%), Positives = 33/43 (76%)
Query: 1 MGLYHVGQAGLELLTSSDPPTSASQNAEITGVSHRAQSKAHNL 43
MG ++ QAGLELL SS+PP SASQ+A ITGVSH A+ H+L
Sbjct: 31 MGSHYFAQAGLELLGSSNPPASASQSAGITGVSHCARPGEHDL 73
>gi|169216486 PREDICTED: hCG_1742852 [Homo sapiens]
Length = 402
Score = 52.4 bits (124), Expect = 1e-07
Identities = 26/33 (78%), Positives = 28/33 (84%)
Query: 5 HVGQAGLELLTSSDPPTSASQNAEITGVSHRAQ 37
HV QAGLELL S DPPTSASQ+A ITGVSH A+
Sbjct: 360 HVDQAGLELLISGDPPTSASQSAGITGVSHWAR 392
>gi|169216528 PREDICTED: hCG_1742852 [Homo sapiens]
Length = 402
Score = 52.4 bits (124), Expect = 1e-07
Identities = 26/33 (78%), Positives = 28/33 (84%)
Query: 5 HVGQAGLELLTSSDPPTSASQNAEITGVSHRAQ 37
HV QAGLELL S DPPTSASQ+A ITGVSH A+
Sbjct: 360 HVDQAGLELLISGDPPTSASQSAGITGVSHWAR 392
>gi|239747074 PREDICTED: hypothetical protein XP_002343911 [Homo
sapiens]
Length = 402
Score = 51.2 bits (121), Expect = 3e-07
Identities = 25/33 (75%), Positives = 28/33 (84%)
Query: 5 HVGQAGLELLTSSDPPTSASQNAEITGVSHRAQ 37
HV QAGLELL S DPPTSASQ+A ITGV+H A+
Sbjct: 360 HVDQAGLELLISGDPPTSASQSAGITGVTHWAR 392
>gi|169216761 PREDICTED: hCG_1742852 [Homo sapiens]
Length = 402
Score = 51.2 bits (121), Expect = 3e-07
Identities = 25/33 (75%), Positives = 28/33 (84%)
Query: 5 HVGQAGLELLTSSDPPTSASQNAEITGVSHRAQ 37
HV QAGLELL S DPPTSASQ+A ITGV+H A+
Sbjct: 360 HVDQAGLELLISGDPPTSASQSAGITGVTHWAR 392
>gi|194473995 zinc finger protein 195 isoform 2 [Homo sapiens]
Length = 606
Score = 50.8 bits (120), Expect = 4e-07
Identities = 26/37 (70%), Positives = 29/37 (78%)
Query: 1 MGLYHVGQAGLELLTSSDPPTSASQNAEITGVSHRAQ 37
MG +H QA LELL SSD P SASQ+A ITGV+HRAQ
Sbjct: 77 MGFHHATQACLELLGSSDLPASASQSAGITGVNHRAQ 113
>gi|194473688 zinc finger protein 195 isoform 1 [Homo sapiens]
Length = 629
Score = 50.8 bits (120), Expect = 4e-07
Identities = 26/37 (70%), Positives = 29/37 (78%)
Query: 1 MGLYHVGQAGLELLTSSDPPTSASQNAEITGVSHRAQ 37
MG +H QA LELL SSD P SASQ+A ITGV+HRAQ
Sbjct: 77 MGFHHATQACLELLGSSDLPASASQSAGITGVNHRAQ 113
>gi|217035093 cyclic nucleotide gated channel alpha 1 isoform 1
[Homo sapiens]
Length = 759
Score = 50.1 bits (118), Expect = 6e-07
Identities = 26/45 (57%), Positives = 32/45 (71%)
Query: 1 MGLYHVGQAGLELLTSSDPPTSASQNAEITGVSHRAQSKAHNLQR 45
MG +HVGQAGLELL SSD PTSASQ+A IT + ++ N Q+
Sbjct: 39 MGFHHVGQAGLELLISSDLPTSASQSAGITDMKLSMKNNIINTQQ 83
>gi|63999355 chromosome 9 open reading frame 37 [Homo sapiens]
Length = 176
Score = 48.5 bits (114), Expect = 2e-06
Identities = 24/37 (64%), Positives = 29/37 (78%)
Query: 1 MGLYHVGQAGLELLTSSDPPTSASQNAEITGVSHRAQ 37
M ++V QA LELLTSS+PP SASQ+ ITG SHRA+
Sbjct: 1 MEFHYVAQADLELLTSSNPPASASQSTGITGGSHRAR 37
>gi|237858668 hypothetical protein LOC123207 isoform d [Homo
sapiens]
Length = 167
Score = 48.1 bits (113), Expect = 2e-06
Identities = 24/36 (66%), Positives = 27/36 (75%)
Query: 2 GLYHVGQAGLELLTSSDPPTSASQNAEITGVSHRAQ 37
G ++ QAGLELL SSD P SASQ+A ITGVSH Q
Sbjct: 124 GSCYIAQAGLELLASSDLPASASQSAGITGVSHHTQ 159
>gi|33188429 tetratricopeptide repeat protein isoform 1 [Homo sapiens]
Length = 1079
Score = 45.8 bits (107), Expect = 1e-05
Identities = 24/36 (66%), Positives = 27/36 (75%)
Query: 2 GLYHVGQAGLELLTSSDPPTSASQNAEITGVSHRAQ 37
G +HVGQA LELLTS SASQ+A ITGVSH A+
Sbjct: 1044 GFHHVGQACLELLTSGGLLASASQSAGITGVSHHAR 1079
>gi|195963398 suppressor of G2 allele of SKP1 isoform a [Homo
sapiens]
Length = 365
Score = 44.3 bits (103), Expect = 3e-05
Identities = 21/30 (70%), Positives = 24/30 (80%)
Query: 2 GLYHVGQAGLELLTSSDPPTSASQNAEITG 31
G + VGQAGL+LLTSSDPP SQ+A ITG
Sbjct: 113 GFHRVGQAGLQLLTSSDPPALDSQSAGITG 142
>gi|169213867 PREDICTED: hypothetical protein LOC100128682 [Homo
sapiens]
Length = 299
Score = 43.5 bits (101), Expect = 6e-05
Identities = 21/30 (70%), Positives = 25/30 (83%)
Query: 8 QAGLELLTSSDPPTSASQNAEITGVSHRAQ 37
QAG++LLT+SD PT ASQ+ ITGVSH AQ
Sbjct: 187 QAGVKLLTASDLPTLASQSVAITGVSHHAQ 216
>gi|169214305 PREDICTED: hypothetical protein LOC100128682 [Homo
sapiens]
Length = 299
Score = 43.5 bits (101), Expect = 6e-05
Identities = 21/30 (70%), Positives = 25/30 (83%)
Query: 8 QAGLELLTSSDPPTSASQNAEITGVSHRAQ 37
QAG++LLT+SD PT ASQ+ ITGVSH AQ
Sbjct: 187 QAGVKLLTASDLPTLASQSVAITGVSHHAQ 216
>gi|169213267 PREDICTED: hypothetical protein LOC100128682 [Homo
sapiens]
Length = 299
Score = 43.5 bits (101), Expect = 6e-05
Identities = 21/30 (70%), Positives = 25/30 (83%)
Query: 8 QAGLELLTSSDPPTSASQNAEITGVSHRAQ 37
QAG++LLT+SD PT ASQ+ ITGVSH AQ
Sbjct: 187 QAGVKLLTASDLPTLASQSVAITGVSHHAQ 216
>gi|29029530 sulfotransferase family, cytosolic, 1C, member 1
isoform b [Homo sapiens]
Length = 307
Score = 43.1 bits (100), Expect = 8e-05
Identities = 19/29 (65%), Positives = 25/29 (86%)
Query: 2 GLYHVGQAGLELLTSSDPPTSASQNAEIT 30
G +HV QAGL+LL+SS+PP S SQ+A+IT
Sbjct: 95 GFHHVAQAGLKLLSSSNPPASTSQSAKIT 123
>gi|54112407 protein kinase CHK2 isoform c [Homo sapiens]
Length = 586
Score = 42.7 bits (99), Expect = 1e-04
Identities = 21/30 (70%), Positives = 23/30 (76%)
Query: 5 HVGQAGLELLTSSDPPTSASQNAEITGVSH 34
HV Q+ LELL SSDPP SASQ+A I GV H
Sbjct: 112 HVTQSDLELLLSSDPPASASQSAGIRGVRH 141
>gi|4506473 v-rel reticuloendotheliosis viral oncogene homolog [Homo
sapiens]
Length = 619
Score = 42.4 bits (98), Expect = 1e-04
Identities = 21/29 (72%), Positives = 22/29 (75%)
Query: 2 GLYHVGQAGLELLTSSDPPTSASQNAEIT 30
G HV Q GLELLTS DPPT ASQ+A IT
Sbjct: 311 GFRHVDQDGLELLTSGDPPTLASQSAGIT 339
>gi|66277202 podocalyxin-like isoform 1 precursor [Homo sapiens]
Length = 558
Score = 42.0 bits (97), Expect = 2e-04
Identities = 23/43 (53%), Positives = 28/43 (65%), Gaps = 3/43 (6%)
Query: 4 YHVGQAGLELLTSSDPPTSASQNAEITG---VSHRAQSKAHNL 43
+HV QAGLELLTS D PT ASQ+A IT +S R Q + +
Sbjct: 241 HHVSQAGLELLTSGDLPTLASQSAGITASSVISQRTQQTSSQM 283
>gi|61744479 solute carrier family 3, member 2 isoform d [Homo
sapiens]
Length = 599
Score = 41.2 bits (95), Expect = 3e-04
Identities = 19/26 (73%), Positives = 22/26 (84%)
Query: 6 VGQAGLELLTSSDPPTSASQNAEITG 31
V QAGL+LL SSDPP AS+NAE+TG
Sbjct: 44 VTQAGLQLLASSDPPALASKNAEVTG 69
>gi|65506891 solute carrier family 3, member 2 isoform c [Homo
sapiens]
Length = 630
Score = 41.2 bits (95), Expect = 3e-04
Identities = 19/26 (73%), Positives = 22/26 (84%)
Query: 6 VGQAGLELLTSSDPPTSASQNAEITG 31
V QAGL+LL SSDPP AS+NAE+TG
Sbjct: 75 VTQAGLQLLASSDPPALASKNAEVTG 100
Score = 39.3 bits (90), Expect = 0.001
Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 1 MGLYHVGQAGLELLTSSDPPTSASQNAEITGVSHRAQSKAHNLQRKLRLSHKSSPPCTYT 60
+G + V Q GLELL S DP SASQNAE+ ++A L+L S PP +
Sbjct: 39 LGSHCVAQTGLELLASGDPLPSASQNAEMIETGSDCVTQA-----GLQLLASSDPPALAS 93
Query: 61 QHA 63
++A
Sbjct: 94 KNA 96
>gi|239751420 PREDICTED: similar to hCG2039376 [Homo sapiens]
Length = 858
Score = 40.0 bits (92), Expect = 7e-04
Identities = 20/29 (68%), Positives = 22/29 (75%)
Query: 6 VGQAGLELLTSSDPPTSASQNAEITGVSH 34
V QAGLELL SS P ASQ+A ITG+SH
Sbjct: 701 VAQAGLELLVSSSPSALASQSAGITGMSH 729
>gi|61744475 solute carrier family 3, member 2 isoform a [Homo
sapiens]
Length = 661
Score = 40.0 bits (92), Expect = 7e-04
Identities = 21/35 (60%), Positives = 26/35 (74%), Gaps = 2/35 (5%)
Query: 6 VGQAGLELLTSSDPPTSASQNAEI--TGVSHRAQS 38
V QAGL+LL SSDPP AS+NAE+ TG H +Q+
Sbjct: 75 VTQAGLQLLASSDPPALASKNAEVTETGFHHVSQA 109
Score = 39.3 bits (90), Expect = 0.001
Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 1 MGLYHVGQAGLELLTSSDPPTSASQNAEITGVSHRAQSKAHNLQRKLRLSHKSSPPCTYT 60
+G + V Q GLELL S DP SASQNAE+ ++A L+L S PP +
Sbjct: 39 LGSHCVAQTGLELLASGDPLPSASQNAEMIETGSDCVTQA-----GLQLLASSDPPALAS 93
Query: 61 QHA 63
++A
Sbjct: 94 KNA 96
Score = 37.7 bits (86), Expect = 0.003
Identities = 18/30 (60%), Positives = 21/30 (70%)
Query: 2 GLYHVGQAGLELLTSSDPPTSASQNAEITG 31
G +HV QA +E LTS DP SAS +A ITG
Sbjct: 102 GFHHVSQADIEFLTSIDPTASASGSAGITG 131
>gi|224494572 hypothetical protein LOC401082 [Homo sapiens]
Length = 95
Score = 39.7 bits (91), Expect = 8e-04
Identities = 20/33 (60%), Positives = 24/33 (72%)
Query: 2 GLYHVGQAGLELLTSSDPPTSASQNAEITGVSH 34
G ++V QAGLELL SS+ PTSA Q A TG+ H
Sbjct: 16 GSHYVAQAGLELLGSSNSPTSAYQAAGTTGLHH 48
>gi|61744477 solute carrier family 3, member 2 isoform b [Homo
sapiens]
Length = 631
Score = 39.7 bits (91), Expect = 8e-04
Identities = 21/36 (58%), Positives = 26/36 (72%), Gaps = 3/36 (8%)
Query: 6 VGQAGLELLTSSDPPTSASQNAEI---TGVSHRAQS 38
V QAGL+LL SSDPP AS+NAE+ TG H +Q+
Sbjct: 44 VTQAGLQLLASSDPPALASKNAEVTVETGFHHVSQA 79
Score = 37.7 bits (86), Expect = 0.003
Identities = 18/30 (60%), Positives = 21/30 (70%)
Query: 2 GLYHVGQAGLELLTSSDPPTSASQNAEITG 31
G +HV QA +E LTS DP SAS +A ITG
Sbjct: 72 GFHHVSQADIEFLTSIDPTASASGSAGITG 101
>gi|205277366 hypothetical protein LOC201158 isoform 1 [Homo
sapiens]
Length = 276
Score = 39.3 bits (90), Expect = 0.001
Identities = 18/29 (62%), Positives = 22/29 (75%)
Query: 5 HVGQAGLELLTSSDPPTSASQNAEITGVS 33
H+ Q GL++L S DPP SA Q+A ITGVS
Sbjct: 159 HIAQTGLKVLGSRDPPASAFQSAGITGVS 187
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.135 0.435
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,720,748
Number of Sequences: 37866
Number of extensions: 214508
Number of successful extensions: 636
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 573
Number of HSP's gapped (non-prelim): 72
length of query: 142
length of database: 18,247,518
effective HSP length: 92
effective length of query: 50
effective length of database: 14,763,846
effective search space: 738192300
effective search space used: 738192300
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.