LOC646670 8572

Name: LOC646670	Sequence: fasta or formatted (422aa)		NCBI GI: 169208214
Description: PREDICTED: similar to COMM domain containing 4		Referenced in: Additional Interaction Domain Families
Other entries for this name: alt prot [437aa] PREDICTED: similar to COMM domain containing 4
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.5 36 2 C cysteine 3.8 16 3 D aspartate 3.1 13 1 E glutamate 3.8 16 2 F phenylalanine 2.1 9 1 G glycine 7.1 30 2 H histidine 4.0 17 2 I isoleucine 2.8 12 1 K lysine 5.7 24 2 L leucine 12.6 53 2 M methionine 1.9 8 2 N asparagine 1.2 5 1 P proline 7.8 33 3 Q glutamine 3.8 16 2 R arginine 7.6 32 2 S serine 9.2 39 2 T threonine 3.3 14 2 V valine 8.1 34 2 W tryptophan 1.9 8 1 Y tyrosine 1.7 7 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to COMM domain containing 4 [Hom... LOC646670 0.979 PREDICTED: similar to COMM domain containing 4 [Hom... LOC440292 0.288 PREDICTED: similar to hCG1731366 LOC440292 0.246 PREDICTED: similar to hCG1731366 LOC440292 0.246 PREDICTED: similar to COMM domain containing 4 [Hom... COMMD4 0.245 COMM domain containing 4 UBE4B 0.008 ubiquitination factor E4B isoform 2 UBE4B 0.008 ubiquitination factor E4B isoform 1 MUC5AC 0.008 mucin 5AC LOC100132635 0.008 PREDICTED: similar to mucin 5, partial ATXN2 0.008 ataxin 2 LOC100293282 0.007 PREDICTED: hypothetical protein LOC100289818 0.007 PREDICTED: hypothetical protein XP_002347476 FLJ45455 0.006 hypothetical protein LOC388336 COMMD10 0.006 COMM domain containing 10 KCNIP2 0.005 Kv channel interacting protein 2 isoform 1 PIGQ 0.005 phosphatidylinositol glycan anchor biosynthesis, cla... PLXNA3 0.005 plexin A3 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.