COMMD4 13013

Name: COMMD4	Sequence: fasta or formatted (199aa)		NCBI GI: 21361661
Description: COMM domain containing 4		Referenced in: Additional Interaction Domain Families
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.5 19 3 C cysteine 3.0 6 1 D aspartate 4.5 9 1 E glutamate 6.5 13 2 F phenylalanine 2.5 5 1 G glycine 5.0 10 1 H histidine 2.0 4 1 I isoleucine 2.0 4 1 K lysine 6.5 13 1 L leucine 16.6 33 2 M methionine 3.0 6 1 N asparagine 0.5 1 1 P proline 3.5 7 1 Q glutamine 5.5 11 2 R arginine 4.5 9 1 S serine 11.6 23 3 T threonine 3.0 6 1 V valine 7.5 15 1 W tryptophan 1.0 2 1 Y tyrosine 1.5 3 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 COMM domain containing 4 LOC440292 0.599 PREDICTED: similar to COMM domain containing 4 [Hom... LOC440292 0.597 PREDICTED: similar to hCG1731366 LOC440292 0.594 PREDICTED: similar to hCG1731366 LOC646670 0.569 PREDICTED: similar to COMM domain containing 4 [Hom... LOC646670 0.533 PREDICTED: similar to COMM domain containing 4 [Hom... COMMD7 0.066 COMM domain containing 7 isoform 1 COMMD7 0.061 COMM domain containing 7 isoform 2 COMMD10 0.058 COMM domain containing 10 COMMD8 0.036 COMM domain containing 8 COMMD1 0.030 MURR1 GRAMD4 0.017 death-inducing-protein ASXL1 0.014 additional sex combs like 1 PHF17 0.014 PHD finger protein 17 short isoform PHF17 0.014 PHD finger protein 17 long isoform UBE4B 0.014 ubiquitination factor E4B isoform 2 UBE4B 0.014 ubiquitination factor E4B isoform 1 LOC441016 0.011 PREDICTED: similar to COMM domain containing 5 [Hom... LOC441016 0.011 PREDICTED: similar to COMM domain containing 5 [Hom... LOC441016 0.011 PREDICTED: similar to COMM domain containing 5 [Hom... BFSP2 0.008 phakinin TBC1D9B 0.008 TBC1 domain family, member 9B (with GRAM domain) iso... TBC1D9B 0.008 TBC1 domain family, member 9B (with GRAM domain) iso... TPM2 0.008 tropomyosin 2 (beta) isoform 2 TPM2 0.008 tropomyosin 2 (beta) isoform 1 SMG1 0.008 PI-3-kinase-related kinase SMG-1 LOC100128328 0.008 PREDICTED: hypothetical protein LOC100128328 0.008 PREDICTED: hypothetical protein EPRS 0.006 glutamyl-prolyl tRNA synthetase SRCAP 0.006 Snf2-related CBP activator protein Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.