BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|169179781 PREDICTED: hypothetical protein [Homo sapiens] (203 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|169179781 PREDICTED: hypothetical protein [Homo sapiens] 407 e-114 gi|169180172 PREDICTED: hypothetical protein [Homo sapiens] 407 e-114 gi|169183867 PREDICTED: hypothetical protein [Homo sapiens] 404 e-113 gi|239748995 PREDICTED: hypothetical protein XP_002346877 [Homo ... 36 0.026 gi|239741995 PREDICTED: hypothetical protein XP_002342368 [Homo ... 35 0.034 gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 35 0.044 gi|50409691 SRp25 nuclear protein isoform 4 [Homo sapiens] 35 0.057 gi|50409707 SRp25 nuclear protein isoform 2 [Homo sapiens] 35 0.057 gi|169206080 PREDICTED: hypothetical protein LOC100132234 [Homo ... 34 0.075 gi|169206459 PREDICTED: hypothetical protein LOC100132234 [Homo ... 34 0.075 gi|169205915 PREDICTED: hypothetical protein LOC100132234 [Homo ... 34 0.097 gi|72534660 splicing factor, arginine/serine-rich 7 [Homo sapiens] 34 0.097 gi|239756568 PREDICTED: similar to BCL2-associated transcription... 33 0.13 gi|169218320 PREDICTED: similar to BCL2-associated transcription... 33 0.13 gi|4557733 latent transforming growth factor beta binding protei... 33 0.22 gi|239748099 PREDICTED: hypothetical protein [Homo sapiens] 33 0.22 gi|157817073 Cdc2-related kinase, arginine/serine-rich isoform 2... 33 0.22 gi|157817023 Cdc2-related kinase, arginine/serine-rich isoform 1... 33 0.22 gi|34013528 zinc finger protein 512B [Homo sapiens] 33 0.22 gi|117938254 BCL2-associated transcription factor 1 isoform 3 [H... 32 0.28 gi|117938251 BCL2-associated transcription factor 1 isoform 2 [H... 32 0.28 gi|7661958 BCL2-associated transcription factor 1 isoform 1 [Hom... 32 0.28 gi|145199237 transcription elongation factor B polypeptide 3 bin... 32 0.28 gi|168229156 NFKB activating protein [Homo sapiens] 32 0.37 gi|239756877 PREDICTED: hypothetical protein [Homo sapiens] 32 0.37 gi|239751371 PREDICTED: hypothetical protein XP_002347821 [Homo ... 32 0.37 gi|239745880 PREDICTED: hypothetical protein XP_002343571 [Homo ... 32 0.37 gi|239743051 PREDICTED: hypothetical protein XP_002342747 [Homo ... 32 0.37 gi|8922149 downstream neighbor of SON [Homo sapiens] 32 0.37 gi|28559065 DNA cytosine-5 methyltransferase 3 beta isoform 6 [H... 32 0.48 >gi|169179781 PREDICTED: hypothetical protein [Homo sapiens] Length = 203 Score = 407 bits (1047), Expect = e-114 Identities = 203/203 (100%), Positives = 203/203 (100%) Query: 1 MHIKAFRTAGCLNSLRDEVAAAKSGLHDSPAFLLEMGDQYSQETVHSQSWVIWTFRRPVE 60 MHIKAFRTAGCLNSLRDEVAAAKSGLHDSPAFLLEMGDQYSQETVHSQSWVIWTFRRPVE Sbjct: 1 MHIKAFRTAGCLNSLRDEVAAAKSGLHDSPAFLLEMGDQYSQETVHSQSWVIWTFRRPVE 60 Query: 61 YCRECPNASVLIREASTSGRGGAGRNAARAHLPAKKASRGRTRRRRPRAAAAAHASTRQL 120 YCRECPNASVLIREASTSGRGGAGRNAARAHLPAKKASRGRTRRRRPRAAAAAHASTRQL Sbjct: 61 YCRECPNASVLIREASTSGRGGAGRNAARAHLPAKKASRGRTRRRRPRAAAAAHASTRQL 120 Query: 121 SQRCMLSALSPASRPSSSAGQRRAGSIESAGPGRPRVNPVQKQLHLVIQANFWSFWKDDA 180 SQRCMLSALSPASRPSSSAGQRRAGSIESAGPGRPRVNPVQKQLHLVIQANFWSFWKDDA Sbjct: 121 SQRCMLSALSPASRPSSSAGQRRAGSIESAGPGRPRVNPVQKQLHLVIQANFWSFWKDDA 180 Query: 181 LDKFGVVFRPLLLAQRNSRLLKV 203 LDKFGVVFRPLLLAQRNSRLLKV Sbjct: 181 LDKFGVVFRPLLLAQRNSRLLKV 203 >gi|169180172 PREDICTED: hypothetical protein [Homo sapiens] Length = 203 Score = 407 bits (1047), Expect = e-114 Identities = 203/203 (100%), Positives = 203/203 (100%) Query: 1 MHIKAFRTAGCLNSLRDEVAAAKSGLHDSPAFLLEMGDQYSQETVHSQSWVIWTFRRPVE 60 MHIKAFRTAGCLNSLRDEVAAAKSGLHDSPAFLLEMGDQYSQETVHSQSWVIWTFRRPVE Sbjct: 1 MHIKAFRTAGCLNSLRDEVAAAKSGLHDSPAFLLEMGDQYSQETVHSQSWVIWTFRRPVE 60 Query: 61 YCRECPNASVLIREASTSGRGGAGRNAARAHLPAKKASRGRTRRRRPRAAAAAHASTRQL 120 YCRECPNASVLIREASTSGRGGAGRNAARAHLPAKKASRGRTRRRRPRAAAAAHASTRQL Sbjct: 61 YCRECPNASVLIREASTSGRGGAGRNAARAHLPAKKASRGRTRRRRPRAAAAAHASTRQL 120 Query: 121 SQRCMLSALSPASRPSSSAGQRRAGSIESAGPGRPRVNPVQKQLHLVIQANFWSFWKDDA 180 SQRCMLSALSPASRPSSSAGQRRAGSIESAGPGRPRVNPVQKQLHLVIQANFWSFWKDDA Sbjct: 121 SQRCMLSALSPASRPSSSAGQRRAGSIESAGPGRPRVNPVQKQLHLVIQANFWSFWKDDA 180 Query: 181 LDKFGVVFRPLLLAQRNSRLLKV 203 LDKFGVVFRPLLLAQRNSRLLKV Sbjct: 181 LDKFGVVFRPLLLAQRNSRLLKV 203 >gi|169183867 PREDICTED: hypothetical protein [Homo sapiens] Length = 203 Score = 404 bits (1039), Expect = e-113 Identities = 202/203 (99%), Positives = 202/203 (99%) Query: 1 MHIKAFRTAGCLNSLRDEVAAAKSGLHDSPAFLLEMGDQYSQETVHSQSWVIWTFRRPVE 60 MHIKAFRTAGCLNSLRDEVAAAKSGLHDSPAFLLEMGDQYSQETVHSQSWVIWTFRRPVE Sbjct: 1 MHIKAFRTAGCLNSLRDEVAAAKSGLHDSPAFLLEMGDQYSQETVHSQSWVIWTFRRPVE 60 Query: 61 YCRECPNASVLIREASTSGRGGAGRNAARAHLPAKKASRGRTRRRRPRAAAAAHASTRQL 120 YCRECPNASVLIREASTSGR GAGRNAARAHLPAKKASRGRTRRRRPRAAAAAHASTRQL Sbjct: 61 YCRECPNASVLIREASTSGRRGAGRNAARAHLPAKKASRGRTRRRRPRAAAAAHASTRQL 120 Query: 121 SQRCMLSALSPASRPSSSAGQRRAGSIESAGPGRPRVNPVQKQLHLVIQANFWSFWKDDA 180 SQRCMLSALSPASRPSSSAGQRRAGSIESAGPGRPRVNPVQKQLHLVIQANFWSFWKDDA Sbjct: 121 SQRCMLSALSPASRPSSSAGQRRAGSIESAGPGRPRVNPVQKQLHLVIQANFWSFWKDDA 180 Query: 181 LDKFGVVFRPLLLAQRNSRLLKV 203 LDKFGVVFRPLLLAQRNSRLLKV Sbjct: 181 LDKFGVVFRPLLLAQRNSRLLKV 203 >gi|239748995 PREDICTED: hypothetical protein XP_002346877 [Homo sapiens] Length = 326 Score = 35.8 bits (81), Expect = 0.026 Identities = 39/110 (35%), Positives = 45/110 (40%), Gaps = 17/110 (15%) Query: 65 CPNASVLIREASTSGRGGAGRNAARAHLPAKKASRGRTRRRRP-RAAAAAHASTR-QLSQ 122 C AS I S GG GR ARA L KA GR R RP ++ A A A+ R S Sbjct: 131 CFPASQQITNTERS-HGGDGRGVARASL-GDKAGAGRAGRGRPAQSPAEADAAARASKSL 188 Query: 123 RCMLSALSPASRPS-------------SSAGQRRAGSIESAGPGRPRVNP 159 + + SAL P RP+ S R G GP RP P Sbjct: 189 KLLSSALPPHLRPAAKTRAVAGPTAKESPPALRTVGDGPRPGPKRPDPAP 238 >gi|239741995 PREDICTED: hypothetical protein XP_002342368 [Homo sapiens] Length = 224 Score = 35.4 bits (80), Expect = 0.034 Identities = 28/87 (32%), Positives = 34/87 (39%), Gaps = 11/87 (12%) Query: 75 ASTSGRG--GAGRNAARAHLPAKKASRGRTRRRRPRAAAAAHASTRQLSQRCMLSALSPA 132 A GRG G G A RA A++ GR R R A A+ S + +PA Sbjct: 59 ARGGGRGWEGGGLGARRAVTAARRGEWGRARESRSAALASPRVSN---------APTTPA 109 Query: 133 SRPSSSAGQRRAGSIESAGPGRPRVNP 159 SR Q R +AG G R P Sbjct: 110 SRNPGLRAQERQSGRRAAGGGGARAEP 136 >gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] Length = 2752 Score = 35.0 bits (79), Expect = 0.044 Identities = 31/90 (34%), Positives = 38/90 (42%), Gaps = 8/90 (8%) Query: 73 REASTSGRGG----AGRNAARAHLPAKKASRGRT---RRRRPRAAAAAHASTRQLSQRCM 125 R +T GR A R +R+ PA++ SR RT RR R R A S + R Sbjct: 565 RSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPARRR 624 Query: 126 LSALSPASRPSSSAGQ-RRAGSIESAGPGR 154 SP R S S RR+G S P R Sbjct: 625 SRTRSPVRRRSRSRSPARRSGRSRSRTPAR 654 Score = 32.7 bits (73), Expect = 0.22 Identities = 29/91 (31%), Positives = 39/91 (42%), Gaps = 5/91 (5%) Query: 73 REASTSGRGGAGRNAARAHL----PAKKASRGRTRRRRPRAAAAAHASTRQLSQRCMLSA 128 R S+S R R + R P K SR +RR R ++ + A +R LS R LS Sbjct: 723 RSGSSSERKNKSRTSQRRSRSNSSPEMKKSRISSRRSRSLSSPRSKAKSR-LSLRRSLSG 781 Query: 129 LSPASRPSSSAGQRRAGSIESAGPGRPRVNP 159 SP + S RR+ S S + R P Sbjct: 782 SSPCPKQKSQTPPRRSRSGSSQPKAKSRTPP 812 Score = 32.3 bits (72), Expect = 0.28 Identities = 26/98 (26%), Positives = 43/98 (43%), Gaps = 7/98 (7%) Query: 73 REASTSGRGGAGRNAARAHLPAKKASRGRTR------RRRPRAAAAAHASTRQLSQRCML 126 R + R A R +R+ PA+++ R R+R R R R + +R L +R Sbjct: 654 RRGRSRSRTPARRGRSRSRTPARRSGRSRSRTPARRGRSRSRTPRRGRSRSRSLVRRGRS 713 Query: 127 SALSPASR-PSSSAGQRRAGSIESAGPGRPRVNPVQKQ 163 + +P R S S+ +R+ S S R +P K+ Sbjct: 714 HSRTPQRRGRSGSSSERKNKSRTSQRRSRSNSSPEMKK 751 Score = 30.8 bits (68), Expect = 0.83 Identities = 23/92 (25%), Positives = 42/92 (45%), Gaps = 2/92 (2%) Query: 71 LIREASTSGRGGAGRNAARAHLPAKKASRGRTRRRRPRAAAAAHASTRQLSQRCMLSALS 130 L+R + R R R+ +++ ++ RT +RR R+ ++ ++S R S S Sbjct: 707 LVRRGRSHSRTPQRRG--RSGSSSERKNKSRTSQRRSRSNSSPEMKKSRISSRRSRSLSS 764 Query: 131 PASRPSSSAGQRRAGSIESAGPGRPRVNPVQK 162 P S+ S RR+ S S P + P ++ Sbjct: 765 PRSKAKSRLSLRRSLSGSSPCPKQKSQTPPRR 796 Score = 29.6 bits (65), Expect = 1.8 Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 1/68 (1%) Query: 85 RNAARAHLPAKKASRGRTRRRRPRAAAAAHASTRQLSQRCMLSALSPASRPSSSAGQRRA 144 R +R+ K SR RRR R++ R LS+R ++ SP +R + RR+ Sbjct: 1669 RRGSRSSPEPKTKSRTPPRRRSSRSSPELTRKAR-LSRRSRSASSSPETRSRTPPRHRRS 1727 Query: 145 GSIESAGP 152 S+ S P Sbjct: 1728 PSVSSPEP 1735 Score = 28.5 bits (62), Expect = 4.1 Identities = 19/71 (26%), Positives = 32/71 (45%) Query: 83 AGRNAARAHLPAKKASRGRTRRRRPRAAAAAHASTRQLSQRCMLSALSPASRPSSSAGQR 142 A + A R P + R RR +++++ +S+ S S+ S +S SSS+ Sbjct: 2585 APKEAVREGRPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2644 Query: 143 RAGSIESAGPG 153 + S A PG Sbjct: 2645 SSSSPSPAKPG 2655 Score = 27.3 bits (59), Expect = 9.1 Identities = 14/53 (26%), Positives = 28/53 (52%) Query: 103 RRRRPRAAAAAHASTRQLSQRCMLSALSPASRPSSSAGQRRAGSIESAGPGRP 155 +R+R +++++ +S+ S S+ S +S SSS+ + S S P +P Sbjct: 2602 KRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKP 2654 >gi|50409691 SRp25 nuclear protein isoform 4 [Homo sapiens] Length = 338 Score = 34.7 bits (78), Expect = 0.057 Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 16/95 (16%) Query: 78 SGRGGAGRNAARAHLPAKKASRGRTRRR----------------RPRAAAAAHASTRQLS 121 SG G A AH+ ++K SR R+R R R +A+ + ++Q + Sbjct: 113 SGPQGGRARGAMAHVGSRKRSRSRSRSRGRGSEKRKKKSRKDTSRNCSASTSQERSKQKA 172 Query: 122 QRCMLSALSPASRPSSSAGQRRAGSIESAGPGRPR 156 +R S+ S +S SSS+ + S S+ GR + Sbjct: 173 RRRTRSSSSSSSSSSSSSSSSSSSSSSSSSDGRKK 207 >gi|50409707 SRp25 nuclear protein isoform 2 [Homo sapiens] Length = 341 Score = 34.7 bits (78), Expect = 0.057 Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 16/95 (16%) Query: 78 SGRGGAGRNAARAHLPAKKASRGRTRRR----------------RPRAAAAAHASTRQLS 121 SG G A AH+ ++K SR R+R R R +A+ + ++Q + Sbjct: 113 SGPQGGRARGAMAHVGSRKRSRSRSRSRGRGSEKRKKKSRKDTSRNCSASTSQERSKQKA 172 Query: 122 QRCMLSALSPASRPSSSAGQRRAGSIESAGPGRPR 156 +R S+ S +S SSS+ + S S+ GR + Sbjct: 173 RRRTRSSSSSSSSSSSSSSSSSSSSSSSSSDGRKK 207 >gi|169206080 PREDICTED: hypothetical protein LOC100132234 [Homo sapiens] Length = 202 Score = 34.3 bits (77), Expect = 0.075 Identities = 22/50 (44%), Positives = 27/50 (54%), Gaps = 1/50 (2%) Query: 74 EASTSGRGGAGRNAARAHLPAKKASRGR-TRRRRPRAAAAAHASTRQLSQ 122 E G G + R+A A PA ++ R RRRRPRAAAA T Q S+ Sbjct: 150 EQKPRGPGRSARSAGAAAPPAGGLAQARQARRRRPRAAAALTGRTHQRSR 199 >gi|169206459 PREDICTED: hypothetical protein LOC100132234 [Homo sapiens] Length = 202 Score = 34.3 bits (77), Expect = 0.075 Identities = 22/50 (44%), Positives = 27/50 (54%), Gaps = 1/50 (2%) Query: 74 EASTSGRGGAGRNAARAHLPAKKASRGR-TRRRRPRAAAAAHASTRQLSQ 122 E G G + R+A A PA ++ R RRRRPRAAAA T Q S+ Sbjct: 150 EQKPRGPGRSARSAGAAAPPAGGLAQARQARRRRPRAAAALTGRTHQRSR 199 >gi|169205915 PREDICTED: hypothetical protein LOC100132234 [Homo sapiens] Length = 202 Score = 33.9 bits (76), Expect = 0.097 Identities = 22/50 (44%), Positives = 27/50 (54%), Gaps = 1/50 (2%) Query: 74 EASTSGRGGAGRNAARAHLPAKKASRGR-TRRRRPRAAAAAHASTRQLSQ 122 E G G + R+A A PA ++ R RRRRPRAAAA T Q S+ Sbjct: 150 EQRPRGPGRSARSAGAAAPPAGGLAQARQARRRRPRAAAALTGRTHQRSR 199 >gi|72534660 splicing factor, arginine/serine-rich 7 [Homo sapiens] Length = 238 Score = 33.9 bits (76), Expect = 0.097 Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 2/87 (2%) Query: 58 PVEYCRECPNASVLIREASTSGRGGAGRNAARAHLPAK--KASRGRTRRRRPRAAAAAHA 115 P + C EC + R R+ +R+H ++ + SR R+R R R+ +A+ Sbjct: 102 PNDRCYECGEKGHYAYDCHRYSRRRRSRSRSRSHSRSRGRRYSRSRSRSRGRRSRSASPR 161 Query: 116 STRQLSQRCMLSALSPASRPSSSAGQR 142 +R +S R SA SR S G R Sbjct: 162 RSRSISLRRSRSASLRRSRSGSIKGSR 188 >gi|239756568 PREDICTED: similar to BCL2-associated transcription factor 1 [Homo sapiens] Length = 869 Score = 33.5 bits (75), Expect = 0.13 Identities = 26/92 (28%), Positives = 40/92 (43%), Gaps = 12/92 (13%) Query: 60 EYCRECPNASVLIREASTSGRG------GAGRNAARAHLP------AKKASRGRTRRRRP 107 +Y R+ N + R GRG G GR + P ++ RGR+R R P Sbjct: 54 DYRRDYRNNRAMRRPYGYRGRGRGYYQGGGGRYHRGGYRPVWNRRHSRSPRRGRSRSRSP 113 Query: 108 RAAAAAHASTRQLSQRCMLSALSPASRPSSSA 139 + + + +R S+R S+ SP S S S+ Sbjct: 114 KRRSVSSQRSRSRSRRSYRSSRSPRSSSSRSS 145 >gi|169218320 PREDICTED: similar to BCL2-associated transcription factor 1 isoform 2 [Homo sapiens] Length = 869 Score = 33.5 bits (75), Expect = 0.13 Identities = 26/92 (28%), Positives = 40/92 (43%), Gaps = 12/92 (13%) Query: 60 EYCRECPNASVLIREASTSGRG------GAGRNAARAHLP------AKKASRGRTRRRRP 107 +Y R+ N + R GRG G GR + P ++ RGR+R R P Sbjct: 54 DYRRDYRNNRAMRRPYGYRGRGRGYYQGGGGRYHRGGYRPVWNRRHSRSPRRGRSRSRSP 113 Query: 108 RAAAAAHASTRQLSQRCMLSALSPASRPSSSA 139 + + + +R S+R S+ SP S S S+ Sbjct: 114 KRRSVSSQRSRSRSRRSYRSSRSPRSSSSRSS 145 >gi|4557733 latent transforming growth factor beta binding protein 2 [Homo sapiens] Length = 1821 Score = 32.7 bits (73), Expect = 0.22 Identities = 31/142 (21%), Positives = 60/142 (42%), Gaps = 11/142 (7%) Query: 58 PVEYCRECPNASVLIREASTSGRGGAGRNAARAHLPAKKASRGRTRRRRPRAAAAAHAST 117 P + PN +R +S +G G ARA PA ++ + P A + S Sbjct: 236 PRRWAERSPN----LRRSSAAGEG----TLARAQPPAPQSPPAP---QSPPAGTLSGLSQ 284 Query: 118 RQLSQRCMLSALSPASRPSSSAGQRRAGSIESAGPGRPRVNPVQKQLHLVIQANFWSFWK 177 SQ+ + + + P+++A + + + GPG + + Q+ + L ++ W Sbjct: 285 THPSQQHVGLSRTVRLHPTATASSQLSSNALPPGPGLEQRDGTQQAVPLEHPSSPWGLNL 344 Query: 178 DDALDKFGVVFRPLLLAQRNSR 199 + + K +VF P + Q +R Sbjct: 345 TEKIKKIKIVFTPTICKQTCAR 366 Score = 30.8 bits (68), Expect = 0.83 Identities = 22/70 (31%), Positives = 31/70 (44%), Gaps = 3/70 (4%) Query: 93 PAKKASRGRTRRRRPRAAAAAHASTRQLSQRCMLSALSPASRPSSSAGQRRAGSIESAGP 152 P ++A G RRP A A S Q S+R A +R S+ GQ++ A P Sbjct: 84 PVERAQPGWGSPRRPTEAEARRPSRAQQSRRVQPPA---QTRRSTPLGQQQPAPRTRAAP 140 Query: 153 GRPRVNPVQK 162 PR+ Q+ Sbjct: 141 ALPRLGTPQR 150 >gi|239748099 PREDICTED: hypothetical protein [Homo sapiens] Length = 295 Score = 32.7 bits (73), Expect = 0.22 Identities = 26/87 (29%), Positives = 36/87 (41%), Gaps = 2/87 (2%) Query: 73 REASTSGRGGAGRNAARAHLPAKKASRGRTRRRRPRAAAAAHASTRQLSQRCMLSALSPA 132 R + + RGGA R A P ++A+R R ++ A S S R + +PA Sbjct: 123 RAVTAARRGGASRPLAGE--PWREAARRRPQQCPQWGRARESRSAALASPRVSNAPTTPA 180 Query: 133 SRPSSSAGQRRAGSIESAGPGRPRVNP 159 SR Q R +AG G R P Sbjct: 181 SRNPGLRAQERQSGRRAAGGGGARAEP 207 >gi|157817073 Cdc2-related kinase, arginine/serine-rich isoform 2 [Homo sapiens] Length = 1481 Score = 32.7 bits (73), Expect = 0.22 Identities = 15/55 (27%), Positives = 33/55 (60%) Query: 85 RNAARAHLPAKKASRGRTRRRRPRAAAAAHASTRQLSQRCMLSALSPASRPSSSA 139 R+ +R+ LP++K+ + R+R +++H+ ++ S R S++SP P +S+ Sbjct: 340 RSLSRSPLPSRKSMKSRSRSPAYSRHSSSHSKKKRSSSRSRHSSISPVRLPLNSS 394 >gi|157817023 Cdc2-related kinase, arginine/serine-rich isoform 1 [Homo sapiens] Length = 1490 Score = 32.7 bits (73), Expect = 0.22 Identities = 15/55 (27%), Positives = 33/55 (60%) Query: 85 RNAARAHLPAKKASRGRTRRRRPRAAAAAHASTRQLSQRCMLSALSPASRPSSSA 139 R+ +R+ LP++K+ + R+R +++H+ ++ S R S++SP P +S+ Sbjct: 340 RSLSRSPLPSRKSMKSRSRSPAYSRHSSSHSKKKRSSSRSRHSSISPVRLPLNSS 394 >gi|34013528 zinc finger protein 512B [Homo sapiens] Length = 892 Score = 32.7 bits (73), Expect = 0.22 Identities = 30/122 (24%), Positives = 47/122 (38%), Gaps = 18/122 (14%) Query: 54 TFRRPVEYCRECPNAS-VLIREASTSGRGGAGRNAARAH---------LPAKKASRGRTR 103 T RP+ R P VL+ + GRN+ + +P K+A R Sbjct: 307 TVSRPIAISRHTPPCKMVLLTRSENKAPRATGRNSGKKRAADSLDTCPIPPKQA---RPE 363 Query: 104 RRRPRAAAAAHASTRQLSQRCMLSALSPASRPSSSAGQRRAGSIESAGPGRPRVNPVQKQ 163 ++ +S QLS +LSP SRPS ++++AGP P ++ Sbjct: 364 NGEYGPSSMGQSSAFQLSADTSSGSLSPGSRPSGG-----MEALKAAGPASPPEEDPERT 418 Query: 164 LH 165 H Sbjct: 419 KH 420 >gi|117938254 BCL2-associated transcription factor 1 isoform 3 [Homo sapiens] Length = 747 Score = 32.3 bits (72), Expect = 0.28 Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 6/66 (9%) Query: 80 RGGAGRNAARAHLP------AKKASRGRTRRRRPRAAAAAHASTRQLSQRCMLSALSPAS 133 +GG GR + P ++ RGR+R R P+ + + +R S+R S+ SP S Sbjct: 82 QGGGGRYHRGGYRPVWNRRHSRSPRRGRSRSRSPKRRSVSSQRSRSRSRRSYRSSRSPRS 141 Query: 134 RPSSSA 139 S S+ Sbjct: 142 SSSRSS 147 >gi|117938251 BCL2-associated transcription factor 1 isoform 2 [Homo sapiens] Length = 869 Score = 32.3 bits (72), Expect = 0.28 Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 6/66 (9%) Query: 80 RGGAGRNAARAHLP------AKKASRGRTRRRRPRAAAAAHASTRQLSQRCMLSALSPAS 133 +GG GR + P ++ RGR+R R P+ + + +R S+R S+ SP S Sbjct: 80 QGGGGRYHRGGYRPVWNRRHSRSPRRGRSRSRSPKRRSVSSQRSRSRSRRSYRSSRSPRS 139 Query: 134 RPSSSA 139 S S+ Sbjct: 140 SSSRSS 145 >gi|7661958 BCL2-associated transcription factor 1 isoform 1 [Homo sapiens] Length = 920 Score = 32.3 bits (72), Expect = 0.28 Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 6/66 (9%) Query: 80 RGGAGRNAARAHLP------AKKASRGRTRRRRPRAAAAAHASTRQLSQRCMLSALSPAS 133 +GG GR + P ++ RGR+R R P+ + + +R S+R S+ SP S Sbjct: 82 QGGGGRYHRGGYRPVWNRRHSRSPRRGRSRSRSPKRRSVSSQRSRSRSRRSYRSSRSPRS 141 Query: 134 RPSSSA 139 S S+ Sbjct: 142 SSSRSS 147 >gi|145199237 transcription elongation factor B polypeptide 3 binding protein 1 [Homo sapiens] Length = 1221 Score = 32.3 bits (72), Expect = 0.28 Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 9/80 (11%) Query: 83 AGRNAARAHLPAKKASRGRTRRRRPRAAAAAHASTRQLSQRCMLSALSPASRPSSSAGQR 142 A + +A P +KA R +++P +A S + R PA RPS ++G Sbjct: 413 ADKKGPQASSPRRKAERPEGTKKKPSSATPVATSGKGRPDR-------PARRPSPTSGDS 465 Query: 143 RAGSIESAGPGRPRVNPVQK 162 R + GP RP P +K Sbjct: 466 RPAA--GRGPPRPLQLPDRK 483 >gi|168229156 NFKB activating protein [Homo sapiens] Length = 415 Score = 32.0 bits (71), Expect = 0.37 Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 5/86 (5%) Query: 74 EASTSGRGGAGRNAARAHLPAKKASRGRTRRRRPRAAAAAHASTRQLSQRCMLSALSPAS 133 + SG GG R+++++ P+K A R RR R + + + Q L LS S Sbjct: 11 DREASGSGGRRRSSSKSPKPSKSARSPRGRRSRSHSCSRSGDRNGLTHQ---LGGLSQGS 67 Query: 134 RPSSSAGQRRAGSIESAGPGRPRVNP 159 R S + R+ S E P PR P Sbjct: 68 RNQSYRSRSRSRSRER--PSAPRGIP 91 >gi|239756877 PREDICTED: hypothetical protein [Homo sapiens] Length = 140 Score = 32.0 bits (71), Expect = 0.37 Identities = 22/73 (30%), Positives = 29/73 (39%), Gaps = 1/73 (1%) Query: 82 GAGRNAARAHLPAKKASRGRTRRRRPRAAAAAHASTRQLSQRCMLSALSPASRPSS-SAG 140 G R+A +H + + G RRR PR A + R C + SP R S SA Sbjct: 33 GTPRSAQSSHPGSSRRRSGTRRRRPPRTAPTCSGAPRTRCTACTARSRSPRRRTSRLSAA 92 Query: 141 QRRAGSIESAGPG 153 R + PG Sbjct: 93 DTRFSRLLFWAPG 105 >gi|239751371 PREDICTED: hypothetical protein XP_002347821 [Homo sapiens] Length = 140 Score = 32.0 bits (71), Expect = 0.37 Identities = 22/73 (30%), Positives = 29/73 (39%), Gaps = 1/73 (1%) Query: 82 GAGRNAARAHLPAKKASRGRTRRRRPRAAAAAHASTRQLSQRCMLSALSPASRPSS-SAG 140 G R+A +H + + G RRR PR A + R C + SP R S SA Sbjct: 33 GTPRSAQSSHPGSSRRRSGTRRRRPPRTAPTCSGAPRTRCTACTARSRSPRRRTSRLSAA 92 Query: 141 QRRAGSIESAGPG 153 R + PG Sbjct: 93 DTRFSRLLFWAPG 105 >gi|239745880 PREDICTED: hypothetical protein XP_002343571 [Homo sapiens] Length = 140 Score = 32.0 bits (71), Expect = 0.37 Identities = 22/73 (30%), Positives = 29/73 (39%), Gaps = 1/73 (1%) Query: 82 GAGRNAARAHLPAKKASRGRTRRRRPRAAAAAHASTRQLSQRCMLSALSPASRPSS-SAG 140 G R+A +H + + G RRR PR A + R C + SP R S SA Sbjct: 33 GTPRSAQSSHPGSSRRRSGTRRRRPPRTAPTCSGAPRTRCTACTARSRSPRRRTSRLSAA 92 Query: 141 QRRAGSIESAGPG 153 R + PG Sbjct: 93 DTRFSRLLFWAPG 105 >gi|239743051 PREDICTED: hypothetical protein XP_002342747 [Homo sapiens] Length = 306 Score = 32.0 bits (71), Expect = 0.37 Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 3/63 (4%) Query: 81 GGAGRNAARAHLPAKKASRGRTRRRRPRAAAAAHASTRQLSQRCMLSALSPASRPSSSAG 140 GG G+ P+++ + G +RR R++ +A +Q +Q A P RP+ G Sbjct: 204 GGTGQRRGSRSSPSRQPAGGTGQRRGSRSSPSAD---QQRAQDREEEAAQPQRRPAGGTG 260 Query: 141 QRR 143 QRR Sbjct: 261 QRR 263 >gi|8922149 downstream neighbor of SON [Homo sapiens] Length = 566 Score = 32.0 bits (71), Expect = 0.37 Identities = 25/63 (39%), Positives = 32/63 (50%), Gaps = 7/63 (11%) Query: 101 RTRRRRPRAAAAAHASTRQLSQ----RCMLSALSPASRPSSSAGQRRAGSIESAGPGRPR 156 R RR+R R+ AA + R+L++ R L A P RP +AG R GS GP R Sbjct: 20 RLRRKRARSRGAAASPPRELTEPAARRAALVAGLPL-RPFPAAGGRGGGS--GGGPAAAR 76 Query: 157 VNP 159 NP Sbjct: 77 RNP 79 >gi|28559065 DNA cytosine-5 methyltransferase 3 beta isoform 6 [Homo sapiens] Length = 845 Score = 31.6 bits (70), Expect = 0.48 Identities = 23/82 (28%), Positives = 34/82 (41%), Gaps = 7/82 (8%) Query: 64 ECPNASVLIREASTSGRGGAGR-------NAARAHLPAKKASRGRTRRRRPRAAAAAHAS 116 + P L RE T A R ++ H P+ +++RGR R + + Sbjct: 95 DTPVMPKLFRETRTRSESPAVRTRNNNSVSSRERHRPSPRSTRGRQGRNHVDESPVEFPA 154 Query: 117 TRQLSQRCMLSALSPASRPSSS 138 TR L +R SA +P P SS Sbjct: 155 TRSLRRRATASAGTPWPSPPSS 176 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.320 0.130 0.393 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 7,861,648 Number of Sequences: 37866 Number of extensions: 348193 Number of successful extensions: 2440 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 70 Number of HSP's successfully gapped in prelim test: 134 Number of HSP's that attempted gapping in prelim test: 2200 Number of HSP's gapped (non-prelim): 355 length of query: 203 length of database: 18,247,518 effective HSP length: 97 effective length of query: 106 effective length of database: 14,574,516 effective search space: 1544898696 effective search space used: 1544898696 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.