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Search of human proteins with 169169118
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169169118 PREDICTED: hypothetical protein [Homo sapiens]
(102 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169169118 PREDICTED: hypothetical protein [Homo sapiens] 201 8e-53
gi|213021190 transducin beta-like 1X isoform b [Homo sapiens] 30 0.41
gi|213021188 transducin beta-like 1X isoform b [Homo sapiens] 30 0.41
gi|213021186 transducin beta-like 1X isoform a [Homo sapiens] 30 0.41
gi|5032159 transducin beta-like 1X isoform a [Homo sapiens] 30 0.41
gi|19913367 transducin beta-like 1Y [Homo sapiens] 30 0.53
gi|19913365 transducin beta-like 1Y [Homo sapiens] 30 0.53
gi|15150805 transducin beta-like 1Y [Homo sapiens] 30 0.53
gi|239748695 PREDICTED: hypothetical protein [Homo sapiens] 29 0.70
gi|239742718 PREDICTED: hypothetical protein XP_002342622 [Homo ... 29 0.70
gi|83367077 mucin 16 [Homo sapiens] 28 1.6
gi|19913371 transducin (beta)-like 1 X-linked receptor 1 [Homo s... 28 1.6
gi|4758630 potassium voltage-gated channel KQT-like protein 3 [H... 28 2.0
gi|210147462 von Willebrand factor A domain containing 5B1 [Homo... 28 2.0
gi|210032509 hypothetical protein LOC100130302 [Homo sapiens] 28 2.0
gi|169208604 PREDICTED: hypothetical protein [Homo sapiens] 27 2.7
gi|113425231 PREDICTED: hypothetical protein [Homo sapiens] 27 2.7
gi|140972063 protein phosphatase 1, regulatory subunit 9B [Homo ... 27 4.5
gi|226437599 V-set and transmembrane domain containing 2B [Homo ... 26 5.9
gi|239757226 PREDICTED: V-set and transmembrane domain containin... 26 5.9
gi|239751732 PREDICTED: V-set and transmembrane domain containin... 26 5.9
gi|239746233 PREDICTED: V-set and transmembrane domain containin... 26 5.9
gi|24234683 ubiquitin specific peptidase 11 [Homo sapiens] 26 5.9
gi|14916433 naked cuticle homolog 1 [Homo sapiens] 26 5.9
gi|226442791 runt-related transcription factor 2 isoform b [Homo... 26 7.7
gi|226442783 runt-related transcription factor 2 isoform a [Homo... 26 7.7
gi|66934969 runt-related transcription factor 2 isoform c [Homo ... 26 7.7
gi|122937319 even-skipped homeobox 2 [Homo sapiens] 26 7.7
gi|30061556 SRY (sex determining region Y)-box 3 [Homo sapiens] 26 7.7
gi|4885665 achaete-scute complex homolog-like 2 [Homo sapiens] 26 7.7
>gi|169169118 PREDICTED: hypothetical protein [Homo sapiens]
Length = 102
Score = 201 bits (512), Expect = 8e-53
Identities = 102/102 (100%), Positives = 102/102 (100%)
Query: 1 MAGCRAVEAHVADANALLGQAPPHHLHDQARLQLERGEVAAPVNRNGLAQDAVQPLHLLP 60
MAGCRAVEAHVADANALLGQAPPHHLHDQARLQLERGEVAAPVNRNGLAQDAVQPLHLLP
Sbjct: 1 MAGCRAVEAHVADANALLGQAPPHHLHDQARLQLERGEVAAPVNRNGLAQDAVQPLHLLP 60
Query: 61 VQHIAVRRRAFAIVQAMPTEAAATAEVAAAEVAAAESPPRGM 102
VQHIAVRRRAFAIVQAMPTEAAATAEVAAAEVAAAESPPRGM
Sbjct: 61 VQHIAVRRRAFAIVQAMPTEAAATAEVAAAEVAAAESPPRGM 102
>gi|213021190 transducin beta-like 1X isoform b [Homo sapiens]
Length = 526
Score = 30.0 bits (66), Expect = 0.41
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 3/92 (3%)
Query: 7 VEAHVADANALLGQAPPHHLHDQARLQLERGEVAAPVNRNGLAQDA--VQPLHLL-PVQH 63
+E+H++ +N PP L + L+ E +N +G D ++ L L+ V
Sbjct: 30 IESHISQSNINGTLVPPAALISILQKGLQYVEAEISINEDGTVFDGRPIESLSLIDAVMP 89
Query: 64 IAVRRRAFAIVQAMPTEAAATAEVAAAEVAAA 95
V+ R A + + + A+ A AAA AAA
Sbjct: 90 DVVQTRQQAFREKLAQQQASAAAAAAAATAAA 121
>gi|213021188 transducin beta-like 1X isoform b [Homo sapiens]
Length = 526
Score = 30.0 bits (66), Expect = 0.41
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 3/92 (3%)
Query: 7 VEAHVADANALLGQAPPHHLHDQARLQLERGEVAAPVNRNGLAQDA--VQPLHLL-PVQH 63
+E+H++ +N PP L + L+ E +N +G D ++ L L+ V
Sbjct: 30 IESHISQSNINGTLVPPAALISILQKGLQYVEAEISINEDGTVFDGRPIESLSLIDAVMP 89
Query: 64 IAVRRRAFAIVQAMPTEAAATAEVAAAEVAAA 95
V+ R A + + + A+ A AAA AAA
Sbjct: 90 DVVQTRQQAFREKLAQQQASAAAAAAAATAAA 121
>gi|213021186 transducin beta-like 1X isoform a [Homo sapiens]
Length = 577
Score = 30.0 bits (66), Expect = 0.41
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 3/92 (3%)
Query: 7 VEAHVADANALLGQAPPHHLHDQARLQLERGEVAAPVNRNGLAQDA--VQPLHLL-PVQH 63
+E+H++ +N PP L + L+ E +N +G D ++ L L+ V
Sbjct: 81 IESHISQSNINGTLVPPAALISILQKGLQYVEAEISINEDGTVFDGRPIESLSLIDAVMP 140
Query: 64 IAVRRRAFAIVQAMPTEAAATAEVAAAEVAAA 95
V+ R A + + + A+ A AAA AAA
Sbjct: 141 DVVQTRQQAFREKLAQQQASAAAAAAAATAAA 172
>gi|5032159 transducin beta-like 1X isoform a [Homo sapiens]
Length = 577
Score = 30.0 bits (66), Expect = 0.41
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 3/92 (3%)
Query: 7 VEAHVADANALLGQAPPHHLHDQARLQLERGEVAAPVNRNGLAQDA--VQPLHLL-PVQH 63
+E+H++ +N PP L + L+ E +N +G D ++ L L+ V
Sbjct: 81 IESHISQSNINGTLVPPAALISILQKGLQYVEAEISINEDGTVFDGRPIESLSLIDAVMP 140
Query: 64 IAVRRRAFAIVQAMPTEAAATAEVAAAEVAAA 95
V+ R A + + + A+ A AAA AAA
Sbjct: 141 DVVQTRQQAFREKLAQQQASAAAAAAAATAAA 172
>gi|19913367 transducin beta-like 1Y [Homo sapiens]
Length = 522
Score = 29.6 bits (65), Expect = 0.53
Identities = 23/97 (23%), Positives = 44/97 (45%), Gaps = 5/97 (5%)
Query: 7 VEAHVADANALLGQAPPHHLHDQARLQLERGEVAAPVNRNGLAQDA--VQPLHLLPV--- 61
+E+H++ +N PP L + L+ E +N++G D+ ++ L L+
Sbjct: 30 IESHISQSNINGTLVPPSALISILQKGLQYVEAEISINKDGTVFDSRPIESLSLIVAVIP 89
Query: 62 QHIAVRRRAFAIVQAMPTEAAATAEVAAAEVAAAESP 98
+ +R++AF +AA E +A AA +P
Sbjct: 90 DVVQMRQQAFGEKLTQQQASAAATEASAMAKAATMTP 126
>gi|19913365 transducin beta-like 1Y [Homo sapiens]
Length = 522
Score = 29.6 bits (65), Expect = 0.53
Identities = 23/97 (23%), Positives = 44/97 (45%), Gaps = 5/97 (5%)
Query: 7 VEAHVADANALLGQAPPHHLHDQARLQLERGEVAAPVNRNGLAQDA--VQPLHLLPV--- 61
+E+H++ +N PP L + L+ E +N++G D+ ++ L L+
Sbjct: 30 IESHISQSNINGTLVPPSALISILQKGLQYVEAEISINKDGTVFDSRPIESLSLIVAVIP 89
Query: 62 QHIAVRRRAFAIVQAMPTEAAATAEVAAAEVAAAESP 98
+ +R++AF +AA E +A AA +P
Sbjct: 90 DVVQMRQQAFGEKLTQQQASAAATEASAMAKAATMTP 126
>gi|15150805 transducin beta-like 1Y [Homo sapiens]
Length = 522
Score = 29.6 bits (65), Expect = 0.53
Identities = 23/97 (23%), Positives = 44/97 (45%), Gaps = 5/97 (5%)
Query: 7 VEAHVADANALLGQAPPHHLHDQARLQLERGEVAAPVNRNGLAQDA--VQPLHLLPV--- 61
+E+H++ +N PP L + L+ E +N++G D+ ++ L L+
Sbjct: 30 IESHISQSNINGTLVPPSALISILQKGLQYVEAEISINKDGTVFDSRPIESLSLIVAVIP 89
Query: 62 QHIAVRRRAFAIVQAMPTEAAATAEVAAAEVAAAESP 98
+ +R++AF +AA E +A AA +P
Sbjct: 90 DVVQMRQQAFGEKLTQQQASAAATEASAMAKAATMTP 126
>gi|239748695 PREDICTED: hypothetical protein [Homo sapiens]
Length = 101
Score = 29.3 bits (64), Expect = 0.70
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 8/62 (12%)
Query: 40 AAPVNRNGLAQDAVQPLHLLPVQHIAVRRRAFAIVQAMPTEAAATAEVAAAEVAAAESPP 99
AAP R +PL P H A+ R+ A+ + + A +E +AA A PP
Sbjct: 19 AAPTRR--------RPLLPPPASHAAMCVRSGAVRARVRAQPAGQSEPSAAAAAVCPPPP 70
Query: 100 RG 101
RG
Sbjct: 71 RG 72
>gi|239742718 PREDICTED: hypothetical protein XP_002342622 [Homo
sapiens]
Length = 101
Score = 29.3 bits (64), Expect = 0.70
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 8/62 (12%)
Query: 40 AAPVNRNGLAQDAVQPLHLLPVQHIAVRRRAFAIVQAMPTEAAATAEVAAAEVAAAESPP 99
AAP R +PL P H A+ R+ A+ + + A +E +AA A PP
Sbjct: 19 AAPTRR--------RPLLPPPASHAAMCVRSGAVRARVRAQPAGQSEPSAAAAAVCPPPP 70
Query: 100 RG 101
RG
Sbjct: 71 RG 72
>gi|83367077 mucin 16 [Homo sapiens]
Length = 14507
Score = 28.1 bits (61), Expect = 1.6
Identities = 12/52 (23%), Positives = 28/52 (53%)
Query: 47 GLAQDAVQPLHLLPVQHIAVRRRAFAIVQAMPTEAAATAEVAAAEVAAAESP 98
G + + QPLH + + ++V+ ++ V ++ A+ T E + + ++ SP
Sbjct: 1978 GTIEQSTQPLHAVSSEKVSVQTQSTPYVNSVAVSASPTHENSVSSGSSTSSP 2029
>gi|19913371 transducin (beta)-like 1 X-linked receptor 1 [Homo
sapiens]
Length = 514
Score = 28.1 bits (61), Expect = 1.6
Identities = 23/89 (25%), Positives = 39/89 (43%), Gaps = 5/89 (5%)
Query: 7 VEAHVADANALLGQAPPHHLHDQARLQLERGEVAAPVNRNGLAQDA--VQPLHLLPV--- 61
+E+H++ +N PP L + L+ E +N +G D ++ L L+
Sbjct: 30 IESHISQSNINGALVPPAALISIIQKGLQYVEAEVSINEDGTLFDGRPIESLSLIDAVMP 89
Query: 62 QHIAVRRRAFAIVQAMPTEAAATAEVAAA 90
+ R++A+ A AAA A AAA
Sbjct: 90 DVVQTRQQAYRDKLAQQQAAAAAAAAAAA 118
>gi|4758630 potassium voltage-gated channel KQT-like protein 3 [Homo
sapiens]
Length = 872
Score = 27.7 bits (60), Expect = 2.0
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 27 HDQARLQLERGEVAAPVNRNGLAQDAVQPLHLLPVQHIAVRR 68
H QA LQ + +P R + +D+ PL L+ V H + R
Sbjct: 761 HSQADLQGPYSDRISPRQRRSITRDSDTPLSLMSVNHEELER 802
>gi|210147462 von Willebrand factor A domain containing 5B1 [Homo
sapiens]
Length = 1215
Score = 27.7 bits (60), Expect = 2.0
Identities = 20/49 (40%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Query: 5 RAVEAHVADANALLGQAPPHHLHDQARLQLERG-EVAAPVNRNGLAQDA 52
RA + A +LG+A LHD RLQ E E+ P G AQDA
Sbjct: 796 RASPSRPATPAPVLGKALVKGLHDSQRLQWEVSFELGTPGPERGGAQDA 844
>gi|210032509 hypothetical protein LOC100130302 [Homo sapiens]
Length = 887
Score = 27.7 bits (60), Expect = 2.0
Identities = 16/39 (41%), Positives = 21/39 (53%)
Query: 60 PVQHIAVRRRAFAIVQAMPTEAAATAEVAAAEVAAAESP 98
P Q + +R F+ A+ AAA A AAA AAA +P
Sbjct: 482 PQQAGSPLKRPFSAAAAIAAAAAAAAAAAAAAAAAAPAP 520
>gi|169208604 PREDICTED: hypothetical protein [Homo sapiens]
Length = 223
Score = 27.3 bits (59), Expect = 2.7
Identities = 20/51 (39%), Positives = 23/51 (45%), Gaps = 9/51 (17%)
Query: 57 HLLPVQHIAVRRRAFAIVQA---------MPTEAAATAEVAAAEVAAAESP 98
H LP+ H +RR A +A P AA A AAA AAA SP
Sbjct: 139 HCLPIPHRRLRRDPSAASRAGRLGSPLGYRPRLLAAAAAAAAAVTAAAGSP 189
>gi|113425231 PREDICTED: hypothetical protein [Homo sapiens]
Length = 223
Score = 27.3 bits (59), Expect = 2.7
Identities = 20/51 (39%), Positives = 23/51 (45%), Gaps = 9/51 (17%)
Query: 57 HLLPVQHIAVRRRAFAIVQA---------MPTEAAATAEVAAAEVAAAESP 98
H LP+ H +RR A +A P AA A AAA AAA SP
Sbjct: 139 HCLPIPHRRLRRDPSAASRAGRLGSPLGYRPRLLAAAAAAAAAVTAAAGSP 189
>gi|140972063 protein phosphatase 1, regulatory subunit 9B [Homo
sapiens]
Length = 817
Score = 26.6 bits (57), Expect = 4.5
Identities = 23/88 (26%), Positives = 35/88 (39%), Gaps = 7/88 (7%)
Query: 19 GQAPPHHLHDQARLQLERGEVA----APVNRNGLAQDAVQPLHLLPVQ---HIAVRRRAF 71
GQ PP H AR + EV V +G ++ P ++ + H A+ +
Sbjct: 275 GQQPPQHRVAPARPPPKPREVRKIKPVEVEESGESEAESAPGEVIQAEVTVHAALENGST 334
Query: 72 AIVQAMPTEAAATAEVAAAEVAAAESPP 99
A P A+ A + AAA +PP
Sbjct: 335 VATAASPAPEEPKAQAAPEKEAAAVAPP 362
>gi|226437599 V-set and transmembrane domain containing 2B [Homo
sapiens]
Length = 285
Score = 26.2 bits (56), Expect = 5.9
Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 6/36 (16%)
Query: 72 AIVQAMPTEAAATAE------VAAAEVAAAESPPRG 101
AI A+P AAA+A VAAA A++ SPP G
Sbjct: 210 AIDPAVPEAAAASAAHTPTTTVAAAAAASSASPPSG 245
>gi|239757226 PREDICTED: V-set and transmembrane domain containing
2B [Homo sapiens]
Length = 285
Score = 26.2 bits (56), Expect = 5.9
Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 6/36 (16%)
Query: 72 AIVQAMPTEAAATAE------VAAAEVAAAESPPRG 101
AI A+P AAA+A VAAA A++ SPP G
Sbjct: 210 AIDPAVPEAAAASAAHTPTTTVAAAAAASSASPPSG 245
>gi|239751732 PREDICTED: V-set and transmembrane domain containing
2B [Homo sapiens]
Length = 285
Score = 26.2 bits (56), Expect = 5.9
Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 6/36 (16%)
Query: 72 AIVQAMPTEAAATAE------VAAAEVAAAESPPRG 101
AI A+P AAA+A VAAA A++ SPP G
Sbjct: 210 AIDPAVPEAAAASAAHTPTTTVAAAAAASSASPPSG 245
>gi|239746233 PREDICTED: V-set and transmembrane domain containing
2B [Homo sapiens]
Length = 285
Score = 26.2 bits (56), Expect = 5.9
Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 6/36 (16%)
Query: 72 AIVQAMPTEAAATAE------VAAAEVAAAESPPRG 101
AI A+P AAA+A VAAA A++ SPP G
Sbjct: 210 AIDPAVPEAAAASAAHTPTTTVAAAAAASSASPPSG 245
>gi|24234683 ubiquitin specific peptidase 11 [Homo sapiens]
Length = 963
Score = 26.2 bits (56), Expect = 5.9
Identities = 19/46 (41%), Positives = 22/46 (47%), Gaps = 6/46 (13%)
Query: 59 LPVQHIAV----RRRAFAIVQAMPTEAAATAEVAAAEVAAAESPPR 100
LP+ H V R A A V A P AAA A VAAA + P+
Sbjct: 28 LPISHSCVGCRRERTAMATVAANP--AAAAAAVAAAAAVTEDREPQ 71
>gi|14916433 naked cuticle homolog 1 [Homo sapiens]
Length = 470
Score = 26.2 bits (56), Expect = 5.9
Identities = 13/44 (29%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Query: 3 GCRAVEAHVADANALLGQAPPHHLHDQARLQLERGEVAAPVNRN 46
GCR ++A +A +LG+ HL + L + + PV R+
Sbjct: 412 GCRGLQAPLASGGPVLGR---EHLRELPALVVYESQAGQPVQRH 452
>gi|226442791 runt-related transcription factor 2 isoform b [Homo
sapiens]
Length = 499
Score = 25.8 bits (55), Expect = 7.7
Identities = 14/26 (53%), Positives = 15/26 (57%)
Query: 75 QAMPTEAAATAEVAAAEVAAAESPPR 100
Q EAAA A AAA AAA + PR
Sbjct: 67 QQQQQEAAAAAAAAAAAAAAAAAVPR 92
>gi|226442783 runt-related transcription factor 2 isoform a [Homo
sapiens]
Length = 521
Score = 25.8 bits (55), Expect = 7.7
Identities = 14/26 (53%), Positives = 15/26 (57%)
Query: 75 QAMPTEAAATAEVAAAEVAAAESPPR 100
Q EAAA A AAA AAA + PR
Sbjct: 67 QQQQQEAAAAAAAAAAAAAAAAAVPR 92
>gi|66934969 runt-related transcription factor 2 isoform c [Homo
sapiens]
Length = 507
Score = 25.8 bits (55), Expect = 7.7
Identities = 14/26 (53%), Positives = 15/26 (57%)
Query: 75 QAMPTEAAATAEVAAAEVAAAESPPR 100
Q EAAA A AAA AAA + PR
Sbjct: 53 QQQQQEAAAAAAAAAAAAAAAAAVPR 78
>gi|122937319 even-skipped homeobox 2 [Homo sapiens]
Length = 476
Score = 25.8 bits (55), Expect = 7.7
Identities = 13/26 (50%), Positives = 15/26 (57%)
Query: 76 AMPTEAAATAEVAAAEVAAAESPPRG 101
A AAA A AA+ AAA +PP G
Sbjct: 357 ASAAAAAAAAAAAASSAAAAGAPPSG 382
>gi|30061556 SRY (sex determining region Y)-box 3 [Homo sapiens]
Length = 446
Score = 25.8 bits (55), Expect = 7.7
Identities = 13/22 (59%), Positives = 14/22 (63%)
Query: 77 MPTEAAATAEVAAAEVAAAESP 98
+P AAA A AAA AAA SP
Sbjct: 230 LPPGAAAAAAAAAAAAAAASSP 251
>gi|4885665 achaete-scute complex homolog-like 2 [Homo sapiens]
Length = 193
Score = 25.8 bits (55), Expect = 7.7
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 6/59 (10%)
Query: 49 AQDAVQPLHLLPVQHIAVRR------RAFAIVQAMPTEAAATAEVAAAEVAAAESPPRG 101
A + ++ L L +H AVR R A+ + P T VAA+ A+ SP RG
Sbjct: 95 AVEYIRALQRLLAEHDAVRNALAGGLRPQAVRPSAPRGPPGTTPVAASPSRASSSPGRG 153
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.128 0.366
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,684,706
Number of Sequences: 37866
Number of extensions: 129381
Number of successful extensions: 581
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 554
Number of HSP's gapped (non-prelim): 38
length of query: 102
length of database: 18,247,518
effective HSP length: 73
effective length of query: 29
effective length of database: 15,483,300
effective search space: 449015700
effective search space used: 449015700
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.