TBL1Y 5187

Name: TBL1Y	Sequence: fasta or formatted (522aa)		NCBI GI: 15150805
Description: transducin beta-like 1Y		Referenced in: Gene Families WD Repeat Proteins Y-linked Genes
Other entries for this name: alt mRNA [522aa] transducin beta-like 1Y alt mRNA [522aa] transducin beta-like 1Y
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.4 44 3 C cysteine 2.1 11 1 D aspartate 5.9 31 2 E glutamate 4.8 25 2 F phenylalanine 3.3 17 1 G glycine 7.5 39 2 H histidine 3.6 19 1 I isoleucine 5.7 30 2 K lysine 4.6 24 2 L leucine 6.7 35 2 M methionine 2.5 13 1 N asparagine 5.7 30 2 P proline 4.2 22 2 Q glutamine 4.6 24 3 R arginine 2.3 12 1 S serine 10.7 56 2 T threonine 6.1 32 2 V valine 6.7 35 2 W tryptophan 2.5 13 1 Y tyrosine 1.9 10 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 transducin beta-like 1Y TBL1Y 1.000 transducin beta-like 1Y TBL1Y 1.000 transducin beta-like 1Y TBL1X 0.918 transducin beta-like 1X isoform b TBL1X 0.918 transducin beta-like 1X isoform b TBL1X 0.918 transducin beta-like 1X isoform a TBL1X 0.918 transducin beta-like 1X isoform a TBL1XR1 0.852 transducin (beta)-like 1 X-linked receptor 1 LOC100291233 0.155 PREDICTED: hypothetical protein XP_002346868 LOC100287918 0.155 PREDICTED: hypothetical protein XP_002342710 LOC100292902 0.110 PREDICTED: similar to transducin (beta)-like 1 X-li... WDR69 0.106 WD repeat domain 69 WDR51B 0.096 WD repeat domain 51B NLE1 0.096 Notchless gene homolog isoform a WDR17 0.095 WD repeat domain 17 isoform 2 WDR17 0.095 WD repeat domain 17 isoform 1 CIAO1 0.093 WD repeat domain 39 WDR5B 0.092 WD repeat domain 5B WDR5 0.089 WD repeat domain 5 WDR5 0.089 WD repeat domain 5 PAFAH1B1 0.088 platelet-activating factor acetylhydrolase, isoform I... WDR51A 0.087 WD repeat domain 51A isoform 2 WDR51A 0.087 WD repeat domain 51A isoform 1 TAF5 0.087 TBP-associated factor 5 WDR51A 0.082 WD repeat domain 51A isoform 3 FBXW7 0.080 F-box and WD repeat domain containing 7 isoform 3 [H... FBXW7 0.080 F-box and WD repeat domain containing 7 isoform 1 [H... FBXW7 0.080 F-box and WD repeat domain containing 7 isoform 2 [H... WDR38 0.075 WD repeat domain 38 SNRNP40 0.075 WD repeat domain 57 (U5 snRNP specific) Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.