Search of human proteins with 169168396

Search of human proteins with 169168396

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|169168396 PREDICTED: hypothetical protein [Homo sapiens]
         (134 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|169168396 PREDICTED: hypothetical protein [Homo sapiens]           284   1e-77
gi|239748690 PREDICTED: hypothetical protein [Homo sapiens]           280   3e-76
gi|239742713 PREDICTED: hypothetical protein [Homo sapiens]           280   3e-76
gi|5902112 SRY (sex determining region Y)-box 30 isoform b [Homo...   114   3e-26
gi|30581117 SRY (sex determining region Y)-box 30 isoform a [Hom...   114   3e-26
gi|38373671 SEC24-related protein C [Homo sapiens]                     39   0.001
gi|38373669 SEC24-related protein C [Homo sapiens]                     39   0.001
gi|239755545 PREDICTED: otogelin isoform 1 [Homo sapiens]              39   0.001
gi|239755543 PREDICTED: otogelin isoform 2 [Homo sapiens]              39   0.001
gi|239749989 PREDICTED: otogelin isoform 2 [Homo sapiens]              39   0.001
gi|239749987 PREDICTED: otogelin isoform 1 [Homo sapiens]              39   0.001
gi|239744300 PREDICTED: otogelin isoform 2 [Homo sapiens]              39   0.001
gi|239744298 PREDICTED: otogelin isoform 1 [Homo sapiens]              39   0.001
gi|61966923 forkhead box B2 [Homo sapiens]                             39   0.001
gi|87239981 tankyrase, TRF1-interacting ankyrin-related ADP-ribo...    39   0.002
gi|149773456 hypothetical protein LOC643314 [Homo sapiens]             37   0.005
gi|60460889 Myb protein P42POP [Homo sapiens]                          37   0.005
gi|146219843 Snf2-related CBP activator protein [Homo sapiens]         37   0.005
gi|239748995 PREDICTED: hypothetical protein XP_002346877 [Homo ...    36   0.008
gi|13027650 small nuclear ribonucleoprotein polypeptide N [Homo ...    36   0.011
gi|13027648 small nuclear ribonucleoprotein polypeptide N [Homo ...    36   0.011
gi|13027646 small nuclear ribonucleoprotein polypeptide N [Homo ...    36   0.011
gi|13027644 small nuclear ribonucleoprotein polypeptide N [Homo ...    36   0.011
gi|4507135 small nuclear ribonucleoprotein polypeptide N [Homo s...    36   0.011
gi|116292168 KRAB A domain containing 1 [Homo sapiens]                 36   0.011
gi|71274144 AT hook, DNA binding motif, containing 1 [Homo sapiens]    36   0.011
gi|38150007 small nuclear ribonucleoprotein polypeptide B/B' iso...    35   0.014
gi|4507125 small nuclear ribonucleoprotein polypeptide B/B' isof...    35   0.014
gi|33286442 BCL6 co-repressor-like 1 [Homo sapiens]                    35   0.014
gi|122937496 WAS/WASL interacting protein family, member 3 [Homo...    35   0.018

>gi|169168396 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 134

 Score =  284 bits (727), Expect = 1e-77
 Identities = 134/134 (100%), Positives = 134/134 (100%)

Query: 1   MERARLEPPPQPHPLSPAPSLLPVEGTSFWAAAVKTPPSPPMLCAAAIATVASSCREGLV 60
           MERARLEPPPQPHPLSPAPSLLPVEGTSFWAAAVKTPPSPPMLCAAAIATVASSCREGLV
Sbjct: 1   MERARLEPPPQPHPLSPAPSLLPVEGTSFWAAAVKTPPSPPMLCAAAIATVASSCREGLV 60

Query: 61  PCAAQQLLEVKLEQVLLLPQPHVPGKGAASSPSGSSGPTCCSCCRPPLPRAPPVGPSYTR 120
           PCAAQQLLEVKLEQVLLLPQPHVPGKGAASSPSGSSGPTCCSCCRPPLPRAPPVGPSYTR
Sbjct: 61  PCAAQQLLEVKLEQVLLLPQPHVPGKGAASSPSGSSGPTCCSCCRPPLPRAPPVGPSYTR 120

Query: 121 CSPGRCTSRPRSRS 134
           CSPGRCTSRPRSRS
Sbjct: 121 CSPGRCTSRPRSRS 134


>gi|239748690 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 134

 Score =  280 bits (715), Expect = 3e-76
 Identities = 133/134 (99%), Positives = 133/134 (99%)

Query: 1   MERARLEPPPQPHPLSPAPSLLPVEGTSFWAAAVKTPPSPPMLCAAAIATVASSCREGLV 60
           MERARLEPPPQPHPLSPAPSLLPVEGTSFWAAAVKTPPSPPMLCAAAIATVASSCREGLV
Sbjct: 1   MERARLEPPPQPHPLSPAPSLLPVEGTSFWAAAVKTPPSPPMLCAAAIATVASSCREGLV 60

Query: 61  PCAAQQLLEVKLEQVLLLPQPHVPGKGAASSPSGSSGPTCCSCCRPPLPRAPPVGPSYTR 120
           PCAAQQLLEVKLEQVLLLPQPHVPGKGAASSPSGSSGPTC SCCRPPLPRAPPVGPSYTR
Sbjct: 61  PCAAQQLLEVKLEQVLLLPQPHVPGKGAASSPSGSSGPTCGSCCRPPLPRAPPVGPSYTR 120

Query: 121 CSPGRCTSRPRSRS 134
           CSPGRCTSRPRSRS
Sbjct: 121 CSPGRCTSRPRSRS 134


>gi|239742713 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 134

 Score =  280 bits (715), Expect = 3e-76
 Identities = 133/134 (99%), Positives = 133/134 (99%)

Query: 1   MERARLEPPPQPHPLSPAPSLLPVEGTSFWAAAVKTPPSPPMLCAAAIATVASSCREGLV 60
           MERARLEPPPQPHPLSPAPSLLPVEGTSFWAAAVKTPPSPPMLCAAAIATVASSCREGLV
Sbjct: 1   MERARLEPPPQPHPLSPAPSLLPVEGTSFWAAAVKTPPSPPMLCAAAIATVASSCREGLV 60

Query: 61  PCAAQQLLEVKLEQVLLLPQPHVPGKGAASSPSGSSGPTCCSCCRPPLPRAPPVGPSYTR 120
           PCAAQQLLEVKLEQVLLLPQPHVPGKGAASSPSGSSGPTC SCCRPPLPRAPPVGPSYTR
Sbjct: 61  PCAAQQLLEVKLEQVLLLPQPHVPGKGAASSPSGSSGPTCGSCCRPPLPRAPPVGPSYTR 120

Query: 121 CSPGRCTSRPRSRS 134
           CSPGRCTSRPRSRS
Sbjct: 121 CSPGRCTSRPRSRS 134


>gi|5902112 SRY (sex determining region Y)-box 30 isoform b [Homo
          sapiens]
          Length = 501

 Score =  114 bits (284), Expect = 3e-26
 Identities = 63/95 (66%), Positives = 71/95 (74%), Gaps = 5/95 (5%)

Query: 1  MERARLEPPPQPHPLSPAPSLLPVEGTSFWAAAVKTPPSPPMLCAAAIATVASSCRE--- 57
          MERAR EPPPQP PL PAP  LPVEGTSFWAAA++ PPS P L AAA AT+ASSC E   
Sbjct: 1  MERARPEPPPQPRPLRPAPPPLPVEGTSFWAAAMEPPPSSPTLSAAASATLASSCGEAVA 60

Query: 58 -GLVPCAAQQLLEVKLEQVLLLPQPHVPGKGAASS 91
           GL P A ++LL+VK EQVLLLPQP    + AA+S
Sbjct: 61 SGLQP-AVRRLLQVKPEQVLLLPQPQAQNEEAAAS 94


>gi|30581117 SRY (sex determining region Y)-box 30 isoform a [Homo
          sapiens]
          Length = 753

 Score =  114 bits (284), Expect = 3e-26
 Identities = 63/95 (66%), Positives = 71/95 (74%), Gaps = 5/95 (5%)

Query: 1  MERARLEPPPQPHPLSPAPSLLPVEGTSFWAAAVKTPPSPPMLCAAAIATVASSCRE--- 57
          MERAR EPPPQP PL PAP  LPVEGTSFWAAA++ PPS P L AAA AT+ASSC E   
Sbjct: 1  MERARPEPPPQPRPLRPAPPPLPVEGTSFWAAAMEPPPSSPTLSAAASATLASSCGEAVA 60

Query: 58 -GLVPCAAQQLLEVKLEQVLLLPQPHVPGKGAASS 91
           GL P A ++LL+VK EQVLLLPQP    + AA+S
Sbjct: 61 SGLQP-AVRRLLQVKPEQVLLLPQPQAQNEEAAAS 94


>gi|38373671 SEC24-related protein C [Homo sapiens]
          Length = 1094

 Score = 39.3 bits (90), Expect = 0.001
 Identities = 37/135 (27%), Positives = 53/135 (39%), Gaps = 13/135 (9%)

Query: 9   PPQPHPLSPAPSLLPV----EGTSFWAAAVKTPPS------PPMLCAAAIATVASSCREG 58
           PP   P  P P+   V     G     A    PPS      PP   A+A  +  +S   G
Sbjct: 121 PPVLQPYGPPPTSAQVATQLSGMQISGAVAPAPPSSGLGFGPPTSLASASGSFPNSGLYG 180

Query: 59  LVPCA-AQQLLEVKLEQVLLLPQPHVPGKGAASSPSGSSGPTCCSCCRPPLPRAPPVGPS 117
             P   A  L + +    +  PQ   P + ++ +P  S GP   S   P LP     GPS
Sbjct: 181 SYPQGQAPPLSQAQGHPGIQTPQRSAPSQASSFTPPASGGPRLPSMTGPLLPGQSFGGPS 240

Query: 118 YTRCSPGRCTSRPRS 132
            ++  P   +S P++
Sbjct: 241 VSQ--PNHVSSPPQA 253


>gi|38373669 SEC24-related protein C [Homo sapiens]
          Length = 1094

 Score = 39.3 bits (90), Expect = 0.001
 Identities = 37/135 (27%), Positives = 53/135 (39%), Gaps = 13/135 (9%)

Query: 9   PPQPHPLSPAPSLLPV----EGTSFWAAAVKTPPS------PPMLCAAAIATVASSCREG 58
           PP   P  P P+   V     G     A    PPS      PP   A+A  +  +S   G
Sbjct: 121 PPVLQPYGPPPTSAQVATQLSGMQISGAVAPAPPSSGLGFGPPTSLASASGSFPNSGLYG 180

Query: 59  LVPCA-AQQLLEVKLEQVLLLPQPHVPGKGAASSPSGSSGPTCCSCCRPPLPRAPPVGPS 117
             P   A  L + +    +  PQ   P + ++ +P  S GP   S   P LP     GPS
Sbjct: 181 SYPQGQAPPLSQAQGHPGIQTPQRSAPSQASSFTPPASGGPRLPSMTGPLLPGQSFGGPS 240

Query: 118 YTRCSPGRCTSRPRS 132
            ++  P   +S P++
Sbjct: 241 VSQ--PNHVSSPPQA 253


>gi|239755545 PREDICTED: otogelin isoform 1 [Homo sapiens]
          Length = 2852

 Score = 38.9 bits (89), Expect = 0.001
 Identities = 34/105 (32%), Positives = 47/105 (44%), Gaps = 10/105 (9%)

Query: 10   PQPHPLSPAPSLLPVEGTSFWAAAVKTPPSPPMLCAAAIATVASSCREGLVPCAAQQLLE 69
            PQPHPL  AP   P + T+    A ++P  PP   AAA  + A+   +GL       L  
Sbjct: 1679 PQPHPLPSAPP-RPAQHTTM---ATRSPALPPETPAAASLSTAT---DGLAATPFMSLES 1731

Query: 70   VKLEQVL--LLPQPHVP-GKGAASSPSGSSGPTCCSCCRPPLPRA 111
             +  Q+L  L P   +P  K   S+P  + GP       P  P+A
Sbjct: 1732 TRPSQLLSGLPPDTSLPLAKVGTSAPVATPGPKASVITTPLQPQA 1776


>gi|239755543 PREDICTED: otogelin isoform 2 [Homo sapiens]
          Length = 2924

 Score = 38.9 bits (89), Expect = 0.001
 Identities = 34/105 (32%), Positives = 47/105 (44%), Gaps = 10/105 (9%)

Query: 10   PQPHPLSPAPSLLPVEGTSFWAAAVKTPPSPPMLCAAAIATVASSCREGLVPCAAQQLLE 69
            PQPHPL  AP   P + T+    A ++P  PP   AAA  + A+   +GL       L  
Sbjct: 1751 PQPHPLPSAPP-RPAQHTTM---ATRSPALPPETPAAASLSTAT---DGLAATPFMSLES 1803

Query: 70   VKLEQVL--LLPQPHVP-GKGAASSPSGSSGPTCCSCCRPPLPRA 111
             +  Q+L  L P   +P  K   S+P  + GP       P  P+A
Sbjct: 1804 TRPSQLLSGLPPDTSLPLAKVGTSAPVATPGPKASVITTPLQPQA 1848


>gi|239749989 PREDICTED: otogelin isoform 2 [Homo sapiens]
          Length = 2852

 Score = 38.9 bits (89), Expect = 0.001
 Identities = 34/105 (32%), Positives = 47/105 (44%), Gaps = 10/105 (9%)

Query: 10   PQPHPLSPAPSLLPVEGTSFWAAAVKTPPSPPMLCAAAIATVASSCREGLVPCAAQQLLE 69
            PQPHPL  AP   P + T+    A ++P  PP   AAA  + A+   +GL       L  
Sbjct: 1679 PQPHPLPSAPP-RPAQHTTM---ATRSPALPPETPAAASLSTAT---DGLAATPFMSLES 1731

Query: 70   VKLEQVL--LLPQPHVP-GKGAASSPSGSSGPTCCSCCRPPLPRA 111
             +  Q+L  L P   +P  K   S+P  + GP       P  P+A
Sbjct: 1732 TRPSQLLSGLPPDTSLPLAKVGTSAPVATPGPKASVITTPLQPQA 1776


>gi|239749987 PREDICTED: otogelin isoform 1 [Homo sapiens]
          Length = 2924

 Score = 38.9 bits (89), Expect = 0.001
 Identities = 34/105 (32%), Positives = 47/105 (44%), Gaps = 10/105 (9%)

Query: 10   PQPHPLSPAPSLLPVEGTSFWAAAVKTPPSPPMLCAAAIATVASSCREGLVPCAAQQLLE 69
            PQPHPL  AP   P + T+    A ++P  PP   AAA  + A+   +GL       L  
Sbjct: 1751 PQPHPLPSAPP-RPAQHTTM---ATRSPALPPETPAAASLSTAT---DGLAATPFMSLES 1803

Query: 70   VKLEQVL--LLPQPHVP-GKGAASSPSGSSGPTCCSCCRPPLPRA 111
             +  Q+L  L P   +P  K   S+P  + GP       P  P+A
Sbjct: 1804 TRPSQLLSGLPPDTSLPLAKVGTSAPVATPGPKASVITTPLQPQA 1848


>gi|239744300 PREDICTED: otogelin isoform 2 [Homo sapiens]
          Length = 2852

 Score = 38.9 bits (89), Expect = 0.001
 Identities = 34/105 (32%), Positives = 47/105 (44%), Gaps = 10/105 (9%)

Query: 10   PQPHPLSPAPSLLPVEGTSFWAAAVKTPPSPPMLCAAAIATVASSCREGLVPCAAQQLLE 69
            PQPHPL  AP   P + T+    A ++P  PP   AAA  + A+   +GL       L  
Sbjct: 1679 PQPHPLPSAPP-RPAQHTTM---ATRSPALPPETPAAASLSTAT---DGLAATPFMSLES 1731

Query: 70   VKLEQVL--LLPQPHVP-GKGAASSPSGSSGPTCCSCCRPPLPRA 111
             +  Q+L  L P   +P  K   S+P  + GP       P  P+A
Sbjct: 1732 TRPSQLLSGLPPDTSLPLAKVGTSAPVATPGPKASVITTPLQPQA 1776


>gi|239744298 PREDICTED: otogelin isoform 1 [Homo sapiens]
          Length = 2924

 Score = 38.9 bits (89), Expect = 0.001
 Identities = 34/105 (32%), Positives = 47/105 (44%), Gaps = 10/105 (9%)

Query: 10   PQPHPLSPAPSLLPVEGTSFWAAAVKTPPSPPMLCAAAIATVASSCREGLVPCAAQQLLE 69
            PQPHPL  AP   P + T+    A ++P  PP   AAA  + A+   +GL       L  
Sbjct: 1751 PQPHPLPSAPP-RPAQHTTM---ATRSPALPPETPAAASLSTAT---DGLAATPFMSLES 1803

Query: 70   VKLEQVL--LLPQPHVP-GKGAASSPSGSSGPTCCSCCRPPLPRA 111
             +  Q+L  L P   +P  K   S+P  + GP       P  P+A
Sbjct: 1804 TRPSQLLSGLPPDTSLPLAKVGTSAPVATPGPKASVITTPLQPQA 1848


>gi|61966923 forkhead box B2 [Homo sapiens]
          Length = 432

 Score = 38.9 bits (89), Expect = 0.001
 Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 3/60 (5%)

Query: 9   PPQPHPLSPAPSLLPVEGTS---FWAAAVKTPPSPPMLCAAAIATVASSCREGLVPCAAQ 65
           P  P P+ P P+L PV          AA + PP+P  +C+AA A+  +S  E   P +A+
Sbjct: 360 PAMPVPIKPTPALPPVSALQPGLTVPAASQQPPAPSTVCSAAAASPVASLLEPTAPTSAE 419


>gi|87239981 tankyrase, TRF1-interacting ankyrin-related ADP-ribose
           polymerase [Homo sapiens]
          Length = 1327

 Score = 38.5 bits (88), Expect = 0.002
 Identities = 34/123 (27%), Positives = 42/123 (34%), Gaps = 17/123 (13%)

Query: 4   ARLEPPPQPHPLSP--APSLLPVEGTSFWAAAV---------------KTPPSPPMLCAA 46
           A   PPP P PLSP  AP   P   T+   A                 + PP  P     
Sbjct: 24  ASAPPPPPPPPLSPGLAPGTTPASPTASGLAPFASPRHGLALPEGDGSRDPPDRPRSPDP 83

Query: 47  AIATVASSCREGLVPCAAQQLLEVKLEQVLLLPQPHVPGKGAASSPSGSSGPTCCSCCRP 106
              T   S    +   AA  ++            P+  G G+ +SPS SS PT  S   P
Sbjct: 84  VDGTSCCSTTSTICTVAAAPVVPAVSTSSAAGVAPNPAGSGSNNSPSSSSSPTSSSSSSP 143

Query: 107 PLP 109
             P
Sbjct: 144 SSP 146


>gi|149773456 hypothetical protein LOC643314 [Homo sapiens]
          Length = 1427

 Score = 37.0 bits (84), Expect = 0.005
 Identities = 29/84 (34%), Positives = 36/84 (42%), Gaps = 5/84 (5%)

Query: 9    PPQPHPLSPAPSLLPVEGTSFWAAAVKTPPSPPMLCAAAIATVASSCREGLVPCAAQQLL 68
            P    P S A ++L  E  S  AA+V TP  P     A+ A   S+  E   P AA    
Sbjct: 1249 PTLEEPTSSAAAVLTPEELSSPAASVPTPEEP-----ASPAAAVSNLEEPASPAAAVPTP 1303

Query: 69   EVKLEQVLLLPQPHVPGKGAASSP 92
            EV       +P P VP   AA+ P
Sbjct: 1304 EVAAIPAASVPTPEVPAIPAAAVP 1327



 Score = 35.8 bits (81), Expect = 0.011
 Identities = 34/104 (32%), Positives = 45/104 (43%), Gaps = 10/104 (9%)

Query: 14   PLSPAPSLLPVEGTSFWAAAVKTPP--SPPMLCAAAIATVASSCREGLVPCAAQQLLEVK 71
            P SPA ++  +E  +  AAAV TP   S P   AA++ T      E   P AA   LE  
Sbjct: 1241 PTSPAAAVPTLEEPTSSAAAVLTPEELSSP---AASVPTP----EEPASPAAAVSNLEEP 1293

Query: 72   LEQVLLLPQPHVPGKGAASSPSGSSGPTCCSCCRPPLPRAPPVG 115
                  +P P V    AAS P+    P   +   PP+    P+G
Sbjct: 1294 ASPAAAVPTPEVAAIPAASVPT-PEVPAIPAAAVPPMEEVSPIG 1336



 Score = 35.4 bits (80), Expect = 0.014
 Identities = 32/105 (30%), Positives = 41/105 (39%), Gaps = 5/105 (4%)

Query: 9    PPQPHPLSPAPSLLPVEGTSFWAAAVKTPPSPPMLCAAAIATVASSCREGLVPCAAQQLL 68
            P    P SPA ++ P E  +  AAAV TP  P    AAA+ T      E   P AA    
Sbjct: 1021 PTPEEPTSPAAAVPPPEEPTSPAAAVPTPEEPTS-PAAAVPTP----EEPTSPAAAVPTP 1075

Query: 69   EVKLEQVLLLPQPHVPGKGAASSPSGSSGPTCCSCCRPPLPRAPP 113
            E        +P P  P   AA+ P+     +  +    P   A P
Sbjct: 1076 EEPTSPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPASP 1120



 Score = 30.8 bits (68), Expect = 0.34
 Identities = 25/90 (27%), Positives = 33/90 (36%), Gaps = 3/90 (3%)

Query: 4    ARLEPPPQPHPLSPAPSLLPVEGTSFWAAAVKTPPSPPMLCAAAIATVASSCREGLVPCA 63
            A LE P  P    P P+ +      F + A   P S      A++A   S+  E   P A
Sbjct: 1190 ATLEEPTSPAASVPTPAAMVATLEEFTSPAASVPTSEE---PASLAAAVSNPEEPTSPAA 1246

Query: 64   AQQLLEVKLEQVLLLPQPHVPGKGAASSPS 93
            A   LE        +  P      AAS P+
Sbjct: 1247 AVPTLEEPTSSAAAVLTPEELSSPAASVPT 1276



 Score = 29.6 bits (65), Expect = 0.76
 Identities = 27/85 (31%), Positives = 34/85 (40%), Gaps = 5/85 (5%)

Query: 9    PPQPHPLSPAPSLLPVEGTSFWAAAVKTPPSPPMLCAAAIATVASSCREGLVPCAAQQLL 68
            P    P SPA ++   E  +  AAAV  P  P    AAA+ T      E   P AA    
Sbjct: 1008 PTPEEPTSPAAAVPTPEEPTSPAAAVPPPEEPTS-PAAAVPTP----EEPTSPAAAVPTP 1062

Query: 69   EVKLEQVLLLPQPHVPGKGAASSPS 93
            E        +P P  P   AA+ P+
Sbjct: 1063 EEPTSPAAAVPTPEEPTSPAAAVPT 1087



 Score = 28.5 bits (62), Expect = 1.7
 Identities = 25/93 (26%), Positives = 34/93 (36%), Gaps = 8/93 (8%)

Query: 9    PPQPHPLSPAPSLLPVEGTSFWAAAVKTPPSPPMLCA--------AAIATVASSCREGLV 60
            P    P SPA ++   E  +  AAAV TP  P    A        A+ A    +  E   
Sbjct: 1086 PTPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPASPAAAVPTPEEPASPAAAVPTPEEPAF 1145

Query: 61   PCAAQQLLEVKLEQVLLLPQPHVPGKGAASSPS 93
            P  A    E      + +P P      AA+ P+
Sbjct: 1146 PAPAVPTPEESASAAVAVPTPEESASPAAAVPT 1178



 Score = 26.2 bits (56), Expect = 8.4
 Identities = 25/85 (29%), Positives = 33/85 (38%), Gaps = 5/85 (5%)

Query: 9    PPQPHPLSPAPSLLPVEGTSFWAAAVKTPPSPPMLCAAAIATVASSCREGLVPCAAQQLL 68
            P    P SPA ++   E  +F A AV TP        A      S+     VP  A+   
Sbjct: 1125 PTPEEPASPAAAVPTPEEPAFPAPAVPTPEESASAAVAVPTPEESASPAAAVPTPAESAS 1184

Query: 69   EVKLEQVLLLPQPHVPGKGAASSPS 93
               +  V  L +P  P   AAS P+
Sbjct: 1185 FAAV--VATLEEPTSP---AASVPT 1204


>gi|60460889 Myb protein P42POP [Homo sapiens]
          Length = 399

 Score = 37.0 bits (84), Expect = 0.005
 Identities = 38/135 (28%), Positives = 46/135 (34%), Gaps = 48/135 (35%)

Query: 1   MERARLEPPPQPHPLSPAPSLLPVEGTSFWAAAVKTPPSPP------------------- 41
           + R  L PPP   PL P P L  V      A +  +PP PP                   
Sbjct: 213 LPRLALSPPPPAPPLPPPPPLAQV------APSPPSPPPPPRPPPTLSASDPSLDFLRAQ 266

Query: 42  MLCAAAIATVASSCREGLVPCAAQQLLEVKLEQVLLLPQPHVPGKGAASSPSGSSGPTCC 101
              A AI  +A + R+GL           KL + L    P +PG    S P         
Sbjct: 267 QETANAIRELAGTLRQGL----------AKLSEALSALLPLLPGTPVDSLP--------- 307

Query: 102 SCCRPPLPRAPPVGP 116
               PPLP  PP  P
Sbjct: 308 ----PPLPPPPPPPP 318



 Score = 26.6 bits (57), Expect = 6.4
 Identities = 19/74 (25%), Positives = 29/74 (39%), Gaps = 10/74 (13%)

Query: 8   PPPQPHPLSPAPSLLPVEGTSFWAAAVKTPPSPPMLCAAAIATVASSCREGLVPCAAQQL 67
           PPP P P  P P   P          V  PP+P +       +V ++  +G V  A   +
Sbjct: 307 PPPLPPPPPPPPPPRP----------VLPPPAPKVEITPEPVSVVAAVVDGAVVAARGVI 356

Query: 68  LEVKLEQVLLLPQP 81
           +  + E+    P P
Sbjct: 357 IAPRSEEGAPRPPP 370


>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
          Length = 3230

 Score = 37.0 bits (84), Expect = 0.005
 Identities = 30/111 (27%), Positives = 42/111 (37%), Gaps = 1/111 (0%)

Query: 8    PPPQPHPLSPAPSLLPVEGTSFWAAAVKTPPSPPMLCAAAIATVASSCREGLVPCAAQQL 67
            P   P  +S +   L    T   A  V   P PP L  +  +  AS+   GL    +   
Sbjct: 1458 PISAPLTVSASGPALLTSVTPPLAPVVPAAPGPPSLAPSGASPSASALTLGLATAPSLSS 1517

Query: 68   LEVKLEQVLLLP-QPHVPGKGAASSPSGSSGPTCCSCCRPPLPRAPPVGPS 117
             +     +LL P   HVPG  +  +P+ S      S    P P AP   P+
Sbjct: 1518 SQTPGHPLLLAPTSSHVPGLNSTVAPACSPVLVPASALASPFPSAPNPAPA 1568



 Score = 32.0 bits (71), Expect = 0.15
 Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 2/40 (5%)

Query: 4    ARLEPPPQPHPLSPAPSLL--PVEGTSFWAAAVKTPPSPP 41
            +R +PPP P PL+P P LL  P    +     V    SPP
Sbjct: 2964 SRTQPPPHPSPLTPLPPLLVCPTATVANTVTTVTISTSPP 3003



 Score = 31.6 bits (70), Expect = 0.20
 Identities = 42/155 (27%), Positives = 59/155 (38%), Gaps = 40/155 (25%)

Query: 2    ERARLEPPPQPHPLSPAPSLLPVEGTSFWAAAVKTP--------------------PSP- 40
            + A L P P P PL+P P L P  G +   A+ +TP                    P+P 
Sbjct: 1594 QTAILAPSPAP-PLAPLPVLAPSPGAAPVLASSQTPVPVMAPSSTPGTSLASASPVPAPT 1652

Query: 41   PMLCAAAIATV------------ASSCREGLVPCAAQQLLEVKLEQVLLL----PQPHVP 84
            P+L  ++  T+            AS+    L P  A  L      Q L L    PQ   P
Sbjct: 1653 PVLAPSSTQTMLPAPVPSPLPSPASTQTLALAPALAPTLGGSSPSQTLSLGTGNPQGPFP 1712

Query: 85   GKGAASSPSGSSGPTCCSCCRPPLPRAPPVGPSYT 119
             +  + +P+ S  PT        L   PP+GP+ T
Sbjct: 1713 TQTLSLTPASSLVPTPAQTL--SLAPGPPLGPTQT 1745



 Score = 27.3 bits (59), Expect = 3.8
 Identities = 25/87 (28%), Positives = 33/87 (37%), Gaps = 8/87 (9%)

Query: 9    PPQPHPLSPAPSLLPVEGTSFWAAAVKTPPS---PPMLCAAAIATVASSCREGL-VPCAA 64
            PP P  LSPAP      G+S     +  PP    PP        T A++    +  P  A
Sbjct: 1110 PPAPVRLSPAPP----PGSSSLLKPLTVPPGYTFPPAAATTTSTTTATATTTAVPAPTPA 1165

Query: 65   QQLLEVKLEQVLLLPQPHVPGKGAASS 91
             Q L +  +    LP   V   G  +S
Sbjct: 1166 PQRLILSPDMQARLPSGEVVSIGQLAS 1192



 Score = 27.3 bits (59), Expect = 3.8
 Identities = 29/92 (31%), Positives = 37/92 (40%), Gaps = 11/92 (11%)

Query: 9    PPQPHPLSPAPSLLPVEGTSFWAAAVKTPPSPPMLCAAAIATV--ASSCREGLVPCAAQQ 66
            P Q   L+P P L P +  S   A    P SP     A   T+  ASS    L P + Q 
Sbjct: 1728 PAQTLSLAPGPPLGPTQTLSLAPAPPLAPASPVGPAPAHTLTLAPASSSASLLAPASVQT 1787

Query: 67   LLEVKLEQVLLLPQPHVPGKGAASSPSGSSGP 98
            L         L P P VP  G A++ + +  P
Sbjct: 1788 L--------TLSPAP-VPTLGPAAAQTLALAP 1810


>gi|239748995 PREDICTED: hypothetical protein XP_002346877 [Homo
           sapiens]
          Length = 326

 Score = 36.2 bits (82), Expect = 0.008
 Identities = 34/108 (31%), Positives = 41/108 (37%), Gaps = 13/108 (12%)

Query: 8   PPPQPHPLSPAPSLLPVEGTSFWAAAVKTPPSPPMLCAAAIATVASSCREGLVPCAAQQL 67
           P P P    PAPS LP       A A++ PP P  L  +    V   C + +V      L
Sbjct: 227 PRPGPKRPDPAPSRLPPPP---HAGALRGPPLPHRLRRSHFREVGGGCADSVV------L 277

Query: 68  LEVKLEQVLLLP---QPHVPGKGAASSPSGSSGPTCCSCCRPPLPRAP 112
            E   EQ    P   +  VPG G A  P G     C    RP    +P
Sbjct: 278 AEPSREQAHAAPPAWRTRVPGAGPA-PPLGLPSLLCADPHRPAFGSSP 324


>gi|13027650 small nuclear ribonucleoprotein polypeptide N [Homo
           sapiens]
          Length = 240

 Score = 35.8 bits (81), Expect = 0.011
 Identities = 31/109 (28%), Positives = 40/109 (36%), Gaps = 22/109 (20%)

Query: 8   PPPQPHPLSPAPSLLPVEGTSFWAAAVKTPPSPPMLCAAAIATVASSCREGLVPCAAQQL 67
           P   P P +PA    PV G    +  V TP     + AAA+A  AS              
Sbjct: 115 PAGVPIPQAPAGLAGPVRGVGGPSQQVMTPQGRGTVAAAAVAATAS-------------- 160

Query: 68  LEVKLEQVLLLPQPHVPGKGAASSPSGSSGPTCCSCCRPPLPRAPPVGP 116
                  +   P  + PG+G    P G + P       PP  R PP+GP
Sbjct: 161 -------IAGAPTQYPPGRGTPPPPVGRATPPPGIMAPPPGMR-PPMGP 201


>gi|13027648 small nuclear ribonucleoprotein polypeptide N [Homo
           sapiens]
          Length = 240

 Score = 35.8 bits (81), Expect = 0.011
 Identities = 31/109 (28%), Positives = 40/109 (36%), Gaps = 22/109 (20%)

Query: 8   PPPQPHPLSPAPSLLPVEGTSFWAAAVKTPPSPPMLCAAAIATVASSCREGLVPCAAQQL 67
           P   P P +PA    PV G    +  V TP     + AAA+A  AS              
Sbjct: 115 PAGVPIPQAPAGLAGPVRGVGGPSQQVMTPQGRGTVAAAAVAATAS-------------- 160

Query: 68  LEVKLEQVLLLPQPHVPGKGAASSPSGSSGPTCCSCCRPPLPRAPPVGP 116
                  +   P  + PG+G    P G + P       PP  R PP+GP
Sbjct: 161 -------IAGAPTQYPPGRGTPPPPVGRATPPPGIMAPPPGMR-PPMGP 201


>gi|13027646 small nuclear ribonucleoprotein polypeptide N [Homo
           sapiens]
          Length = 240

 Score = 35.8 bits (81), Expect = 0.011
 Identities = 31/109 (28%), Positives = 40/109 (36%), Gaps = 22/109 (20%)

Query: 8   PPPQPHPLSPAPSLLPVEGTSFWAAAVKTPPSPPMLCAAAIATVASSCREGLVPCAAQQL 67
           P   P P +PA    PV G    +  V TP     + AAA+A  AS              
Sbjct: 115 PAGVPIPQAPAGLAGPVRGVGGPSQQVMTPQGRGTVAAAAVAATAS-------------- 160

Query: 68  LEVKLEQVLLLPQPHVPGKGAASSPSGSSGPTCCSCCRPPLPRAPPVGP 116
                  +   P  + PG+G    P G + P       PP  R PP+GP
Sbjct: 161 -------IAGAPTQYPPGRGTPPPPVGRATPPPGIMAPPPGMR-PPMGP 201


>gi|13027644 small nuclear ribonucleoprotein polypeptide N [Homo
           sapiens]
          Length = 240

 Score = 35.8 bits (81), Expect = 0.011
 Identities = 31/109 (28%), Positives = 40/109 (36%), Gaps = 22/109 (20%)

Query: 8   PPPQPHPLSPAPSLLPVEGTSFWAAAVKTPPSPPMLCAAAIATVASSCREGLVPCAAQQL 67
           P   P P +PA    PV G    +  V TP     + AAA+A  AS              
Sbjct: 115 PAGVPIPQAPAGLAGPVRGVGGPSQQVMTPQGRGTVAAAAVAATAS-------------- 160

Query: 68  LEVKLEQVLLLPQPHVPGKGAASSPSGSSGPTCCSCCRPPLPRAPPVGP 116
                  +   P  + PG+G    P G + P       PP  R PP+GP
Sbjct: 161 -------IAGAPTQYPPGRGTPPPPVGRATPPPGIMAPPPGMR-PPMGP 201


>gi|4507135 small nuclear ribonucleoprotein polypeptide N [Homo
           sapiens]
          Length = 240

 Score = 35.8 bits (81), Expect = 0.011
 Identities = 31/109 (28%), Positives = 40/109 (36%), Gaps = 22/109 (20%)

Query: 8   PPPQPHPLSPAPSLLPVEGTSFWAAAVKTPPSPPMLCAAAIATVASSCREGLVPCAAQQL 67
           P   P P +PA    PV G    +  V TP     + AAA+A  AS              
Sbjct: 115 PAGVPIPQAPAGLAGPVRGVGGPSQQVMTPQGRGTVAAAAVAATAS-------------- 160

Query: 68  LEVKLEQVLLLPQPHVPGKGAASSPSGSSGPTCCSCCRPPLPRAPPVGP 116
                  +   P  + PG+G    P G + P       PP  R PP+GP
Sbjct: 161 -------IAGAPTQYPPGRGTPPPPVGRATPPPGIMAPPPGMR-PPMGP 201


>gi|116292168 KRAB A domain containing 1 [Homo sapiens]
          Length = 1030

 Score = 35.8 bits (81), Expect = 0.011
 Identities = 33/122 (27%), Positives = 50/122 (40%), Gaps = 24/122 (19%)

Query: 10  PQPHPLSPAPSLLPVEGTSFWAAAVKTPPSPPMLCAAAIATVASSCREGLVPCAAQQLLE 69
           P PHP   A  LL V+  + W   V++PP P            +SC+ G  P +     +
Sbjct: 317 PPPHPDLGAGGLLSVKMENSW---VQSPPGP------------ASCQPGRQPLSPSATGD 361

Query: 70  VKLEQVLLLPQPHVPGKGAASSPSGSSGPTCCSCCRPPLPRAPPVGPSYTRCSPGRCTSR 129
            +      +PQP    +  A+S S S      +C    L   PP G S ++  P  C+  
Sbjct: 362 TR-----GVPQPSWGPEAQAASASSSPLEALEAC----LKGIPPNGSSPSQLPPTSCSQN 412

Query: 130 PR 131
           P+
Sbjct: 413 PQ 414



 Score = 30.0 bits (66), Expect = 0.58
 Identities = 40/139 (28%), Positives = 47/139 (33%), Gaps = 26/139 (18%)

Query: 2   ERARLEPPPQPHPLSPAPSLLPVEGTSFWAAAVKTPPSPPMLCAAAIATVASSCREGLVP 61
           ER RL     P PLSP P   P  G+S  +       + P  C+   A  A        P
Sbjct: 669 ERDRLPSCKPPVPLSPCPGGTPA-GSSGGSPGEDPRRTEPRYCSGLGAGTAQD------P 721

Query: 62  CAAQQL------LEVKLEQVLLLPQPHVPGK--------GAASSPSGSSGPTCCSCCRPP 107
           C   QL       E      L   +P V  K        G    PS S  P       PP
Sbjct: 722 CPVSQLEKRPRVSEASRGLELGHGRPRVAAKTHERLLPQGPPELPSESPPPEL-----PP 776

Query: 108 LPRAPPVGPSYTRCSPGRC 126
              APPV P+ +   P  C
Sbjct: 777 PEAAPPVLPASSLQPPCHC 795


>gi|71274144 AT hook, DNA binding motif, containing 1 [Homo sapiens]
          Length = 1603

 Score = 35.8 bits (81), Expect = 0.011
 Identities = 39/141 (27%), Positives = 53/141 (37%), Gaps = 18/141 (12%)

Query: 1   MERARLEPP---PQPHPLSPAPSLLPVEGTSFWAAAVKTPPSPPMLCAAAIATVASSCRE 57
           +E   LEPP   P+P  L P P  L  +       A++ PP  P+     +  +A    +
Sbjct: 259 LEAQALEPPSPEPEPQLLDPQPRFLDPQALEPLGEALELPPLQPLADPLGLPGLALQALD 318

Query: 58  GLVPCAAQQLLEVKLEQVLLLPQP---HVPGKG-AASSPSGS---SGPTCCSCCRPPLPR 110
            L      QLL+ +     L P P    VPG+      P G    + P     C P  P 
Sbjct: 319 TLPDSLESQLLDPQ----ALDPLPKLLDVPGRRLEPQQPLGHCPLAEPLRLDLCSPHGPP 374

Query: 111 APPVGPSYTRCSPGRCTSRPR 131
            P   P Y      R T RP+
Sbjct: 375 GPEGHPKYAL----RRTDRPK 391


>gi|38150007 small nuclear ribonucleoprotein polypeptide B/B'
           isoform B' [Homo sapiens]
          Length = 240

 Score = 35.4 bits (80), Expect = 0.014
 Identities = 34/120 (28%), Positives = 41/120 (34%), Gaps = 23/120 (19%)

Query: 8   PPPQPHPLSPAPSLLPVEGTSFWAAAVKTPPSPPMLCAAAIATVASSCREGLVPCAAQQL 67
           P   P P +PA    PV G    +  V TP     + AAA A  AS              
Sbjct: 115 PAGVPMPQAPAGLAGPVRGVGGPSQQVMTPQGRGTVAAAAAAATAS-------------- 160

Query: 68  LEVKLEQVLLLPQPHVPGKGAASSPSGSSGPTCCSCCRPPLPRAPPVGPSYTRCSPGRCT 127
                  +   P  + PG+G    P G   P       PP    PP+GP      PGR T
Sbjct: 161 -------IAGAPTQYPPGRGGPPPPMGRGAPP-PGMMGPPPGMRPPMGPP-MGIPPGRGT 211


>gi|4507125 small nuclear ribonucleoprotein polypeptide B/B' isoform
           B [Homo sapiens]
          Length = 231

 Score = 35.4 bits (80), Expect = 0.014
 Identities = 34/120 (28%), Positives = 41/120 (34%), Gaps = 23/120 (19%)

Query: 8   PPPQPHPLSPAPSLLPVEGTSFWAAAVKTPPSPPMLCAAAIATVASSCREGLVPCAAQQL 67
           P   P P +PA    PV G    +  V TP     + AAA A  AS              
Sbjct: 115 PAGVPMPQAPAGLAGPVRGVGGPSQQVMTPQGRGTVAAAAAAATAS-------------- 160

Query: 68  LEVKLEQVLLLPQPHVPGKGAASSPSGSSGPTCCSCCRPPLPRAPPVGPSYTRCSPGRCT 127
                  +   P  + PG+G    P G   P       PP    PP+GP      PGR T
Sbjct: 161 -------IAGAPTQYPPGRGGPPPPMGRGAPP-PGMMGPPPGMRPPMGPP-MGIPPGRGT 211


>gi|33286442 BCL6 co-repressor-like 1 [Homo sapiens]
          Length = 1711

 Score = 35.4 bits (80), Expect = 0.014
 Identities = 33/115 (28%), Positives = 37/115 (32%), Gaps = 16/115 (13%)

Query: 8   PPPQPHPLS---PAPSLLPVEGTSFWAAAVKTPPSPPMLCAAAIATVASSCREGLVPCAA 64
           PP  P PLS   PAP  +PV            PPS P L  A + T   +      P AA
Sbjct: 290 PPSGPVPLSAPAPAPLSVPVSAPPLALIQAPVPPSAPTLVLAPVPTPVLAPMPASTPPAA 349

Query: 65  QQLLEVKLEQVLLLPQPHVPGKGAASSPSGSSGPTCCSCCRPPLPRAPPVGPSYT 119
                           P VP      S    S PT      P    AP   P +T
Sbjct: 350 P-------------APPSVPMPTPTPSSGPPSTPTLIPAFAPTPVPAPTPAPIFT 391


>gi|122937496 WAS/WASL interacting protein family, member 3 [Homo
           sapiens]
          Length = 483

 Score = 35.0 bits (79), Expect = 0.018
 Identities = 38/124 (30%), Positives = 47/124 (37%), Gaps = 19/124 (15%)

Query: 8   PPPQPHPLSPAPSLLPVEGTSFWAAAVKTPPSPPML-----CA--AAIATVASSCREGLV 60
           PPP P PL PA S+L  +      A +  PP PP L     C      A  AS  ++   
Sbjct: 230 PPPTPPPLPPA-SVLSDKAVKPQLAPLHLPPIPPPLPLLPPCGYPGLKAEPASPAQDAQE 288

Query: 61  PCAAQQLLE--VKLEQVLLLPQPHVPGKGAAS---------SPSGSSGPTCCSCCRPPLP 109
           P A    L           LP P +PG  ++S         SPS  + P        P P
Sbjct: 289 PPAPPPPLPPYASCSPRASLPAPPLPGVNSSSETPPPLPPKSPSFQAPPQKAGAQALPAP 348

Query: 110 RAPP 113
            APP
Sbjct: 349 PAPP 352



 Score = 28.5 bits (62), Expect = 1.7
 Identities = 32/131 (24%), Positives = 44/131 (33%), Gaps = 15/131 (11%)

Query: 8   PPPQPHPLSPAPSLLPVEGTSFWAAAVKTPP-----------SPPMLCAAAIATVASSCR 56
           PPP   P  P P   P+  +S     + +PP           +PP+ CA           
Sbjct: 174 PPPPTPPPPPPPLPPPLPSSSPIKTPLVSPPGPLTKGNLPVVAPPVPCAPPPPPPPPPPT 233

Query: 57  EGLVPCAAQQLLEVKLEQVLLLPQPHVPGKGAASSPSGSSG----PTCCSCCRPPLPRAP 112
              +P A+    +    Q+  L  P +P       P G  G    P   +      P  P
Sbjct: 234 PPPLPPASVLSDKAVKPQLAPLHLPPIPPPLPLLPPCGYPGLKAEPASPAQDAQEPPAPP 293

Query: 113 PVGPSYTRCSP 123
           P  P Y  CSP
Sbjct: 294 PPLPPYASCSP 304



 Score = 26.9 bits (58), Expect = 4.9
 Identities = 31/123 (25%), Positives = 41/123 (33%), Gaps = 28/123 (22%)

Query: 8   PPPQPHPLSPAPSLLPVEGTSFWAAAVKTPPSPPMLCAAAIATVASSCR----EGLVPCA 63
           PPP P PL P P  L               P PP   A  ++T  SS R    +G     
Sbjct: 4   PPPPPPPLPPPPPPLGA-------------PPPPPPSAPPVSTDTSSLRRADPKGRSALL 50

Query: 64  AQQLLEVKLEQVLLLPQPHVP-----------GKGAASSPSGSSGPTCCSCCRPPLPRAP 112
           A      +L +V  +     P           G G+A++   S+ PT         P   
Sbjct: 51  ADIQQGTRLRKVTQINDRSAPQIESSKGTNKEGGGSANTRGASTPPTLGDLFAGGFPVLR 110

Query: 113 PVG 115
           P G
Sbjct: 111 PAG 113


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.132    0.432 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,369,400
Number of Sequences: 37866
Number of extensions: 522315
Number of successful extensions: 5723
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 152
Number of HSP's successfully gapped in prelim test: 443
Number of HSP's that attempted gapping in prelim test: 4514
Number of HSP's gapped (non-prelim): 1473
length of query: 134
length of database: 18,247,518
effective HSP length: 91
effective length of query: 43
effective length of database: 14,801,712
effective search space: 636473616
effective search space used: 636473616
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.