LOC442142 17343

Name: LOC442142	Sequence: fasta or formatted (134aa)		NCBI GI: 239742713
Description: PREDICTED: hypothetical protein		Not currently referenced in the text
Other entries for this name: alt prot {134aa} PREDICTED: hypothetical protein alt mRNA {134aa} PREDICTED: hypothetical protein
Composition: Amino acid Percentage Count Longest homopolymer A alanine 11.2 15 3 C cysteine 6.0 8 2 D aspartate 0.0 0 0 E glutamate 4.5 6 1 F phenylalanine 0.7 1 1 G glycine 6.7 9 1 H histidine 1.5 2 1 I isoleucine 0.7 1 1 K lysine 2.2 3 1 L leucine 9.7 13 3 M methionine 1.5 2 1 N asparagine 0.0 0 0 P proline 19.4 26 3 Q glutamine 3.7 5 2 R arginine 7.5 10 1 S serine 12.7 17 2 T threonine 4.5 6 1 V valine 6.0 8 1 W tryptophan 0.7 1 1 Y tyrosine 0.7 1 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein LOC442142 1.000 PREDICTED: hypothetical protein LOC442142 0.988 PREDICTED: hypothetical protein SOX30 0.345 SRY (sex determining region Y)-box 30 isoform b [Homo... SOX30 0.345 SRY (sex determining region Y)-box 30 isoform a [Hom... SEC24C 0.058 SEC24-related protein C SEC24C 0.058 SEC24-related protein C OTOG 0.054 PREDICTED: otogelin isoform 1 OTOG 0.054 PREDICTED: otogelin isoform 2 OTOG 0.054 PREDICTED: otogelin isoform 2 OTOG 0.054 PREDICTED: otogelin isoform 1 OTOG 0.054 PREDICTED: otogelin isoform 2 OTOG 0.054 PREDICTED: otogelin isoform 1 SNRPN 0.054 small nuclear ribonucleoprotein polypeptide N SNRPN 0.054 small nuclear ribonucleoprotein polypeptide N SNRPN 0.054 small nuclear ribonucleoprotein polypeptide N SNRPN 0.054 small nuclear ribonucleoprotein polypeptide N SNRPN 0.054 small nuclear ribonucleoprotein polypeptide N SNRPB 0.054 small nuclear ribonucleoprotein polypeptide B/B' iso... SNRPB 0.054 small nuclear ribonucleoprotein polypeptide B/B' isof... TNKS 0.054 tankyrase, TRF1-interacting ankyrin-related ADP-ribo... FOXB2 0.054 forkhead box B2 KIAA0754 0.047 hypothetical protein LOC643314 MYPOP 0.047 Myb protein P42POP SRCAP 0.047 Snf2-related CBP activator protein KRBA1 0.047 KRAB A domain containing 1 LOC100289949 0.043 PREDICTED: hypothetical protein XP_002346877 LAMC3 0.039 laminin, gamma 3 precursor FLJ22184 0.039 PREDICTED: hypothetical protein FLJ22184 WIPF3 0.039 WAS/WASL interacting protein family, member 3 [Homo... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.