SNRPN 2946

Name: SNRPN	Sequence: fasta or formatted (240aa)		NCBI GI: 13027648
Description: small nuclear ribonucleoprotein polypeptide N		Referenced in: Small RNAs in RNA Processing Capping and Splicing
Other entries for this name: alt mRNA [240aa] small nuclear ribonucleoprotein polypeptide N alt mRNA [240aa] small nuclear ribonucleoprotein polypeptide N alt mRNA [240aa] small nuclear ribonucleoprotein polypeptide N alt mRNA [240aa] small nuclear ribonucleoprotein polypeptide N
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.0 24 4 C cysteine 1.2 3 1 D aspartate 2.5 6 1 E glutamate 2.5 6 2 F phenylalanine 1.7 4 1 G glycine 15.0 36 2 H histidine 0.8 2 1 I isoleucine 5.4 13 1 K lysine 4.2 10 1 L leucine 5.0 12 2 M methionine 5.0 12 1 N asparagine 1.2 3 1 P proline 20.0 48 4 Q glutamine 3.3 8 2 R arginine 8.3 20 1 S serine 2.1 5 2 T threonine 4.6 11 1 V valine 6.2 15 1 W tryptophan 0.0 0 0 Y tyrosine 0.8 2 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 small nuclear ribonucleoprotein polypeptide N SNRPN 1.000 small nuclear ribonucleoprotein polypeptide N SNRPN 1.000 small nuclear ribonucleoprotein polypeptide N SNRPN 1.000 small nuclear ribonucleoprotein polypeptide N SNRPN 1.000 small nuclear ribonucleoprotein polypeptide N SNRPB 0.952 small nuclear ribonucleoprotein polypeptide B/B' iso... SNRPB 0.896 small nuclear ribonucleoprotein polypeptide B/B' isof... LOC100133224 0.449 PREDICTED: similar to hCG2041320 LOC100133224 0.449 PREDICTED: similar to hCG2041320 LOC100133224 0.449 PREDICTED: similar to hCG2041320 SF3A2 0.109 splicing factor 3a, subunit 2 FMN2 0.102 formin 2 CPSF6 0.100 cleavage and polyadenylation specific factor 6, 68 ... SAMD1 0.098 sterile alpha motif domain containing 1 SF3B4 0.096 splicing factor 3b, subunit 4 WBP11 0.096 WW domain binding protein 11 ANXA11 0.090 annexin A11 ANXA11 0.090 annexin A11 ANXA11 0.090 annexin A11 FMN1 0.088 formin 1 NACA 0.088 nascent polypeptide-associated complex alpha subuni... COL4A3 0.084 alpha 3 type IV collagen isoform 5 precursor COL4A3 0.084 alpha 3 type IV collagen isoform 4 precursor COL4A3 0.084 alpha 3 type IV collagen isoform 2 precursor COL4A3 0.084 alpha 3 type IV collagen isoform 1 precursor SETD1B 0.084 SET domain containing 1B SFPQ 0.084 splicing factor proline/glutamine rich (polypyrimidin... COL17A1 0.081 alpha 1 type XVII collagen SMARCC2 0.081 SWI/SNF-related matrix-associated actin-dependent re... PRB3 0.081 proline-rich protein BstNI subfamily 3 precursor [H... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.