Guide to the Human Genome
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Name: RHOJ Sequence: fasta or formatted (214aa) NCBI GI: 16903164
Description:

ras homolog gene family, member J

Referenced in:

Rho and Rac

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.1         13           1
 C cysteine            5.6         12           2
 D aspartate           6.1         13           2
 E glutamate           6.1         13           2
 F phenylalanine       2.8          6           1
 G glycine             7.0         15           2
 H histidine           3.3          7           1
 I isoleucine          3.7          8           2
 K lysine              8.9         19           5
 L leucine             9.8         21           2
 M methionine          2.3          5           1
 N asparagine          3.3          7           1
 P proline             5.1         11           1
 Q glutamine           3.3          7           1
 R arginine            2.3          5           1
 S serine              4.7         10           2
 T threonine           5.6         12           1
 V valine              8.4         18           3
 W tryptophan          0.5          1           1
 Y tyrosine            5.1         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ras homolog gene family, member J 
RHOQ                  0.674   ras-like protein TC10 
CDC42                 0.531   cell division cycle 42 isoform 1 
CDC42                 0.531   cell division cycle 42 isoform 1 
CDC42                 0.521   cell division cycle 42 isoform 2 
RAC1                  0.502   ras-related C3 botulinum toxin substrate 1 isoform Ra...
RAC3                  0.498   ras-related C3 botulinum toxin substrate 3 (rho famil...
RAC2                  0.486   ras-related C3 botulinum toxin substrate 2 
RAC1                  0.477   ras-related C3 botulinum toxin substrate 1 isoform Ra...
RHOG                  0.415   ras homolog gene family, member G 
RHOU                  0.413   ras homolog gene family, member U 
RHOA                  0.392   ras homolog gene family, member A 
RHOC                  0.392   ras homolog gene family, member C precursor 
RHOC                  0.392   ras homolog gene family, member C precursor 
RHOC                  0.392   ras homolog gene family, member C precursor 
RHOB                  0.376   ras homolog gene family, member B 
RHOV                  0.369   ras homolog gene family, member V 
RHOF                  0.362   ras homolog gene family, member F 
RHOD                  0.324   ras homolog D 
RND3                  0.289   ras homolog gene family, member E 
RHOH                  0.279   ras homolog gene family, member H 
RND2                  0.263   Rho family GTPase 2 
RND1                  0.254   GTP-binding protein RHO6 
RHOBTB2               0.183   Rho-related BTB domain containing 2 isoform 3 [Homo...
RHOBTB2               0.183   Rho-related BTB domain containing 2 isoform 2 [Homo...
RHOBTB2               0.183   Rho-related BTB domain containing 2 isoform 1 [Homo...
RHOBTB1               0.171   Rho-related BTB domain containing 1 
NRAS                  0.138   neuroblastoma RAS viral (v-ras) oncogene homolog [Hom...
HRAS                  0.136   v-Ha-ras Harvey rat sarcoma viral oncogene homolog ...
HRAS                  0.136   v-Ha-ras Harvey rat sarcoma viral oncogene homolog is...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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