Guide to the Human Genome
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Name: RHOD Sequence: fasta or formatted (210aa) NCBI GI: 7656900
Description:

ras homolog D

Referenced in:

Rho and Rac

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.1         17           2
 C cysteine            2.9          6           1
 D aspartate           5.7         12           2
 E glutamate           4.8         10           2
 F phenylalanine       5.2         11           1
 G glycine             7.1         15           2
 H histidine           2.9          6           1
 I isoleucine          2.4          5           2
 K lysine              4.8         10           2
 L leucine             8.1         17           3
 M methionine          1.9          4           1
 N asparagine          4.3          9           1
 P proline             5.2         11           2
 Q glutamine           2.9          6           1
 R arginine            7.1         15           2
 S serine              5.2         11           2
 T threonine           4.8         10           1
 V valine             11.9         25           2
 W tryptophan          1.4          3           1
 Y tyrosine            3.3          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ras homolog D 
RHOF                  0.493   ras homolog gene family, member F 
RHOA                  0.437   ras homolog gene family, member A 
RAC1                  0.432   ras-related C3 botulinum toxin substrate 1 isoform Ra...
RAC3                  0.427   ras-related C3 botulinum toxin substrate 3 (rho famil...
RHOC                  0.424   ras homolog gene family, member C precursor 
RHOC                  0.424   ras homolog gene family, member C precursor 
RHOC                  0.424   ras homolog gene family, member C precursor 
RHOB                  0.417   ras homolog gene family, member B 
RAC1                  0.407   ras-related C3 botulinum toxin substrate 1 isoform Ra...
RAC2                  0.407   ras-related C3 botulinum toxin substrate 2 
RHOG                  0.390   ras homolog gene family, member G 
CDC42                 0.376   cell division cycle 42 isoform 1 
CDC42                 0.376   cell division cycle 42 isoform 1 
CDC42                 0.376   cell division cycle 42 isoform 2 
RHOQ                  0.361   ras-like protein TC10 
RND2                  0.359   Rho family GTPase 2 
RND3                  0.356   ras homolog gene family, member E 
RHOJ                  0.337   ras homolog gene family, member J 
RHOU                  0.322   ras homolog gene family, member U 
RHOV                  0.322   ras homolog gene family, member V 
RND1                  0.320   GTP-binding protein RHO6 
RHOH                  0.254   ras homolog gene family, member H 
RHOBTB2               0.207   Rho-related BTB domain containing 2 isoform 3 [Homo...
RHOBTB2               0.207   Rho-related BTB domain containing 2 isoform 2 [Homo...
RHOBTB2               0.207   Rho-related BTB domain containing 2 isoform 1 [Homo...
RHOBTB1               0.202   Rho-related BTB domain containing 1 
RAB37                 0.171   RAB37, member RAS oncogene family isoform 3 
RAB1A                 0.163   RAB1A, member RAS oncogene family isoform 1 
RAB37                 0.161   RAB37, member RAS oncogene family isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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