Guide to the Human Genome
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Name: RAC3 Sequence: fasta or formatted (192aa) NCBI GI: 4826962
Description:

ras-related C3 botulinum toxin substrate 3 (rho family, small GTP binding protein Rac3)

Referenced in:

Rho and Rac

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.8         13           1
 C cysteine            3.6          7           1
 D aspartate           6.8         13           2
 E glutamate           4.2          8           1
 F phenylalanine       3.6          7           1
 G glycine             6.2         12           1
 H histidine           1.6          3           2
 I isoleucine          4.7          9           1
 K lysine              7.3         14           2
 L leucine             9.9         19           2
 M methionine          1.6          3           1
 N asparagine          2.6          5           1
 P proline             7.8         15           3
 Q glutamine           2.6          5           1
 R arginine            5.2         10           1
 S serine              4.2          8           1
 T threonine           6.8         13           2
 V valine              9.4         18           3
 W tryptophan          1.0          2           1
 Y tyrosine            4.2          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ras-related C3 botulinum toxin substrate 3 (rho famil... 
RAC1                  0.933   ras-related C3 botulinum toxin substrate 1 isoform Ra...
RAC1                  0.904   ras-related C3 botulinum toxin substrate 1 isoform Ra...
RAC2                  0.893   ras-related C3 botulinum toxin substrate 2 
CDC42                 0.693   cell division cycle 42 isoform 2 
CDC42                 0.682   cell division cycle 42 isoform 1 
CDC42                 0.682   cell division cycle 42 isoform 1 
RHOG                  0.671   ras homolog gene family, member G 
RHOQ                  0.602   ras-like protein TC10 
RHOJ                  0.567   ras homolog gene family, member J 
RHOU                  0.505   ras homolog gene family, member U 
RHOA                  0.497   ras homolog gene family, member A 
RHOC                  0.492   ras homolog gene family, member C precursor 
RHOC                  0.492   ras homolog gene family, member C precursor 
RHOC                  0.492   ras homolog gene family, member C precursor 
RHOV                  0.489   ras homolog gene family, member V 
RHOB                  0.484   ras homolog gene family, member B 
RHOD                  0.468   ras homolog D 
RHOF                  0.433   ras homolog gene family, member F 
RND2                  0.377   Rho family GTPase 2 
RND3                  0.372   ras homolog gene family, member E 
RHOH                  0.348   ras homolog gene family, member H 
RND1                  0.326   GTP-binding protein RHO6 
RHOBTB2               0.281   Rho-related BTB domain containing 2 isoform 3 [Homo...
RHOBTB2               0.281   Rho-related BTB domain containing 2 isoform 2 [Homo...
RHOBTB2               0.281   Rho-related BTB domain containing 2 isoform 1 [Homo...
RHOBTB1               0.278   Rho-related BTB domain containing 1 
RIT1                  0.179   Ras-like without CAAX 1 
RAB9B                 0.174   RAB9B, member RAS oncogene family 
RAP2B                 0.171   RAP2B, member of RAS oncogene family 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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