PDLIM3 6879

Name: PDLIM3	Sequence: fasta or formatted (316aa)		NCBI GI: 166235178
Description: PDZ and LIM domain protein 3 isoform b		Referenced in: Muscle
Other entries for this name: alt prot [364aa] PDZ and LIM domain protein 3 isoform a
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.2 29 4 C cysteine 2.5 8 1 D aspartate 6.3 20 2 E glutamate 4.4 14 1 F phenylalanine 3.2 10 2 G glycine 8.9 28 2 H histidine 3.2 10 1 I isoleucine 5.1 16 1 K lysine 4.7 15 1 L leucine 6.3 20 1 M methionine 1.6 5 1 N asparagine 3.8 12 1 P proline 8.5 27 2 Q glutamine 5.1 16 1 R arginine 6.3 20 2 S serine 6.6 21 2 T threonine 5.1 16 1 V valine 6.0 19 2 W tryptophan 0.6 2 1 Y tyrosine 2.5 8 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PDZ and LIM domain protein 3 isoform b PDLIM3 0.817 PDZ and LIM domain protein 3 isoform a PDLIM1 0.503 PDZ and LIM domain 1 PDLIM4 0.378 PDZ and LIM domain 4 isoform 1 PDLIM2 0.210 PDZ and LIM domain 2 isoform 2 PDLIM4 0.187 PDZ and LIM domain 4 isoform 2 PDLIM2 0.178 PDZ and LIM domain 2 isoform 1 LDB3 0.154 LIM domain binding 3 isoform 4 LDB3 0.154 LIM domain binding 3 isoform 2 PDLIM7 0.151 PDZ and LIM domain 7 isoform 1 PDLIM7 0.149 PDZ and LIM domain 7 isoform 2 LDB3 0.129 LIM domain binding 3 isoform 3 LDB3 0.129 LIM domain binding 3 isoform 1 PDLIM7 0.116 PDZ and LIM domain 7 isoform 4 PDLIM2 0.111 PDZ and LIM domain 2 isoform 3 PDLIM5 0.103 PDZ and LIM domain 5 isoform a PDLIM5 0.098 PDZ and LIM domain 5 isoform e PDLIM5 0.098 PDZ and LIM domain 5 isoform d PDLIM5 0.098 PDZ and LIM domain 5 isoform b SYNPO2L 0.063 synaptopodin 2-like isoform a SYNPO2 0.054 synaptopodin 2 isoform c SYNPO2 0.054 synaptopodin 2 isoform b SYNPO2 0.054 synaptopodin 2 isoform a SHROOM2 0.049 apical protein of Xenopus-like ABLIM2 0.044 actin binding LIM protein family, member 2 isoform ... ABLIM2 0.044 actin binding LIM protein family, member 2 isoform ... ABLIM2 0.044 actin binding LIM protein family, member 2 isoform ... ABLIM2 0.044 actin binding LIM protein family, member 2 isoform ... ABLIM2 0.044 actin binding LIM protein family, member 2 isoform ... ABLIM2 0.044 actin binding LIM protein family, member 2 isoform ... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.