PDLIM2 26894

Name: PDLIM2	Sequence: fasta or formatted (278aa)		NCBI GI: 38327612
Description: PDZ and LIM domain 2 isoform 3		Referenced in: LIM Domain Proteins
Other entries for this name: alt prot [352aa] PDZ and LIM domain 2 isoform 2 alt prot [366aa] PDZ and LIM domain 2 isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.8 30 2 C cysteine 0.7 2 1 D aspartate 4.3 12 1 E glutamate 5.8 16 2 F phenylalanine 2.5 7 1 G glycine 9.4 26 2 H histidine 0.7 2 1 I isoleucine 2.5 7 2 K lysine 1.8 5 1 L leucine 9.0 25 3 M methionine 1.8 5 1 N asparagine 1.1 3 1 P proline 9.0 25 3 Q glutamine 4.3 12 1 R arginine 9.4 26 2 S serine 15.5 43 4 T threonine 5.8 16 1 V valine 4.3 12 1 W tryptophan 0.4 1 1 Y tyrosine 1.1 3 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PDZ and LIM domain 2 isoform 3 PDLIM2 0.913 PDZ and LIM domain 2 isoform 1 PDLIM2 0.913 PDZ and LIM domain 2 isoform 2 PDLIM1 0.184 PDZ and LIM domain 1 PDLIM4 0.170 PDZ and LIM domain 4 isoform 2 PDLIM4 0.166 PDZ and LIM domain 4 isoform 1 PDLIM3 0.143 PDZ and LIM domain protein 3 isoform a PDLIM3 0.135 PDZ and LIM domain protein 3 isoform b LDB3 0.126 LIM domain binding 3 isoform 3 LDB3 0.126 LIM domain binding 3 isoform 1 PDLIM5 0.126 PDZ and LIM domain 5 isoform a PDLIM5 0.118 PDZ and LIM domain 5 isoform e PDLIM5 0.118 PDZ and LIM domain 5 isoform d PDLIM5 0.118 PDZ and LIM domain 5 isoform b LDB3 0.108 LIM domain binding 3 isoform 4 LDB3 0.108 LIM domain binding 3 isoform 2 PDLIM7 0.104 PDZ and LIM domain 7 isoform 4 PDLIM7 0.104 PDZ and LIM domain 7 isoform 2 PDLIM7 0.104 PDZ and LIM domain 7 isoform 1 SYNPO2L 0.085 synaptopodin 2-like isoform a MAGIX 0.068 MAGI family member, X-linked isoform b MAGIX 0.064 MAGI family member, X-linked isoform a MAGI2 0.062 membrane associated guanylate kinase, WW and PDZ dom... SHROOM3 0.058 shroom family member 3 protein SYNPO2 0.056 synaptopodin 2 isoform c SYNPO2 0.056 synaptopodin 2 isoform b SYNPO2 0.056 synaptopodin 2 isoform a MAGI1 0.056 membrane associated guanylate kinase, WW and PDZ dom... SHROOM2 0.052 apical protein of Xenopus-like MAGI3 0.048 membrane-associated guanylate kinase-related 3 iso... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.