CLRN1 6774

Name: CLRN1	Sequence: fasta or formatted (120aa)		NCBI GI: 16506281
Description: clarin 1 isoform c		Referenced in: Auditory and Vestibular Functions
Other entries for this name: alt prot [232aa] clarin 1 isoform a
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.8 7 1 C cysteine 1.7 2 1 D aspartate 0.8 1 1 E glutamate 4.2 5 1 F phenylalanine 7.5 9 2 G glycine 6.7 8 1 H histidine 4.2 5 2 I isoleucine 7.5 9 1 K lysine 6.7 8 1 L leucine 12.5 15 2 M methionine 3.3 4 1 N asparagine 2.5 3 1 P proline 4.2 5 1 Q glutamine 4.2 5 3 R arginine 0.0 0 0 S serine 8.3 10 1 T threonine 6.7 8 2 V valine 7.5 9 1 W tryptophan 0.8 1 1 Y tyrosine 5.0 6 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 clarin 1 isoform c CLRN1 0.868 clarin 1 isoform a CLRN2 0.224 clarin 2 CLRN3 0.142 clarin 3 LOC100294023 0.023 PREDICTED: hypothetical protein LOC100290508 0.023 PREDICTED: hypothetical protein XP_002346946 LOC100289187 0.023 PREDICTED: hypothetical protein XP_002342783 LOC100289187 0.023 PREDICTED: hypothetical protein TSC1 0.014 tuberous sclerosis 1 protein isoform 1 TSC1 0.014 tuberous sclerosis 1 protein isoform 3 CUL7 0.009 cullin 7 SLC22A23 0.009 solute carrier family 22, member 23 isoform a [Homo... SLC22A23 0.009 solute carrier family 22, member 23 isoform b OR51B2 0.009 olfactory receptor, family 51, subfamily B, member ... CACNA1A 0.005 calcium channel, alpha 1A subunit isoform 4 CACNA1A 0.005 calcium channel, alpha 1A subunit isoform 3 TACR2 0.005 tachykinin receptor 2 MRVI1 0.005 JAW1-related protein isoform a MRVI1 0.005 JAW1-related protein isoform c MRVI1 0.005 JAW1-related protein isoform b MRVI1 0.005 JAW1-related protein isoform b OR51B4 0.005 olfactory receptor, family 51, subfamily B, member ... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.