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Search of human proteins with 164519076
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|164519076 transmembrane 9 superfamily protein member 4 [Homo
sapiens]
(642 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|164519076 transmembrane 9 superfamily protein member 4 [Homo ... 1321 0.0
gi|4758874 transmembrane 9 superfamily member 2 [Homo sapiens] 548 e-156
gi|190194386 transmembrane 9 superfamily member 3 [Homo sapiens] 346 4e-95
gi|21361315 transmembrane 9 superfamily member 1 isoform a [Homo... 334 1e-91
gi|62460635 transmembrane 9 superfamily member 1 isoform b [Homo... 218 2e-56
gi|62632750 ATPase, class VI, type 11B [Homo sapiens] 36 0.096
gi|170784865 CAS1 domain containing 1 [Homo sapiens] 34 0.36
gi|150421681 ATPase, class VI, type 11A isoform b [Homo sapiens] 31 3.1
gi|223671915 GDP-fucose transporter 1 isoform a [Homo sapiens] 31 3.1
gi|223671919 GDP-fucose transporter 1 isoform b [Homo sapiens] 31 3.1
gi|223671917 GDP-fucose transporter 1 isoform b [Homo sapiens] 31 3.1
gi|153792144 ATP-binding cassette, sub-family A, member 10 [Homo... 31 3.1
gi|150421684 ATPase, class VI, type 11A isoform a [Homo sapiens] 31 3.1
gi|134948605 ankyrin repeat domain 12 isoform 2 [Homo sapiens] 31 4.0
gi|134948558 ankyrin repeat domain 12 isoform 1 [Homo sapiens] 31 4.0
gi|153791630 bromodomain and WD repeat domain containing 3 [Homo... 31 4.0
gi|116812593 liver-specific organic anion transporter 3TM12 [Hom... 30 5.3
gi|116256344 novel 58.3 KDA protein isoform 2 [Homo sapiens] 30 6.9
gi|116256342 novel 58.3 KDA protein isoform 1 [Homo sapiens] 30 6.9
gi|197333695 poly(A)-specific ribonuclease (deadenylation nuclea... 30 9.0
gi|4505611 poly(A)-specific ribonuclease (deadenylation nuclease... 30 9.0
gi|4505069 MAX dimerization protein 1 [Homo sapiens] 30 9.0
>gi|164519076 transmembrane 9 superfamily protein member 4 [Homo
sapiens]
Length = 642
Score = 1321 bits (3419), Expect = 0.0
Identities = 642/642 (100%), Positives = 642/642 (100%)
Query: 1 MATAMDWLPWSLLLFSLMCETSAFYVPGVAPINFHQNDPVEIKAVKLTSSRTQLPYEYYS 60
MATAMDWLPWSLLLFSLMCETSAFYVPGVAPINFHQNDPVEIKAVKLTSSRTQLPYEYYS
Sbjct: 1 MATAMDWLPWSLLLFSLMCETSAFYVPGVAPINFHQNDPVEIKAVKLTSSRTQLPYEYYS 60
Query: 61 LPFCQPSKITYKAENLGEVLRGDRIVNTPFQVLMNSEKKCEVLCSQSNKPVTLTVEQSRL 120
LPFCQPSKITYKAENLGEVLRGDRIVNTPFQVLMNSEKKCEVLCSQSNKPVTLTVEQSRL
Sbjct: 61 LPFCQPSKITYKAENLGEVLRGDRIVNTPFQVLMNSEKKCEVLCSQSNKPVTLTVEQSRL 120
Query: 121 VAERITEDYYVHLIADNLPVATRLELYSNRDSDDKKKEKDVQFEHGYRLGFTDVNKIYLH 180
VAERITEDYYVHLIADNLPVATRLELYSNRDSDDKKKEKDVQFEHGYRLGFTDVNKIYLH
Sbjct: 121 VAERITEDYYVHLIADNLPVATRLELYSNRDSDDKKKEKDVQFEHGYRLGFTDVNKIYLH 180
Query: 181 NHLSFILYYHREDMEEDQEHTYRVVRFEVIPQSIRLEDLKADEKSSCTLPEGTNSSPQEI 240
NHLSFILYYHREDMEEDQEHTYRVVRFEVIPQSIRLEDLKADEKSSCTLPEGTNSSPQEI
Sbjct: 181 NHLSFILYYHREDMEEDQEHTYRVVRFEVIPQSIRLEDLKADEKSSCTLPEGTNSSPQEI 240
Query: 241 DPTKENQLYFTYSVHWEESDIKWASRWDTYLTMSDVQIHWFSIINSVVVVFFLSGILSMI 300
DPTKENQLYFTYSVHWEESDIKWASRWDTYLTMSDVQIHWFSIINSVVVVFFLSGILSMI
Sbjct: 241 DPTKENQLYFTYSVHWEESDIKWASRWDTYLTMSDVQIHWFSIINSVVVVFFLSGILSMI 300
Query: 301 IIRTLRKDIANYNKEDDIEDTMEESGWKLVHGDVFRPPQYPMILSSLLGSGIQLFCMILI 360
IIRTLRKDIANYNKEDDIEDTMEESGWKLVHGDVFRPPQYPMILSSLLGSGIQLFCMILI
Sbjct: 301 IIRTLRKDIANYNKEDDIEDTMEESGWKLVHGDVFRPPQYPMILSSLLGSGIQLFCMILI 360
Query: 361 VIFVAMLGMLSPSSRGALMTTACFLFMFMGVFGGFSAGRLYRTLKGHRWKKGAFCTATLY 420
VIFVAMLGMLSPSSRGALMTTACFLFMFMGVFGGFSAGRLYRTLKGHRWKKGAFCTATLY
Sbjct: 361 VIFVAMLGMLSPSSRGALMTTACFLFMFMGVFGGFSAGRLYRTLKGHRWKKGAFCTATLY 420
Query: 421 PGVVFGICFVLNCFIWGKHSSGAVPFPTMVALLCMWFGISLPLVYLGYYFGFRKQPYDNP 480
PGVVFGICFVLNCFIWGKHSSGAVPFPTMVALLCMWFGISLPLVYLGYYFGFRKQPYDNP
Sbjct: 421 PGVVFGICFVLNCFIWGKHSSGAVPFPTMVALLCMWFGISLPLVYLGYYFGFRKQPYDNP 480
Query: 481 VRTNQIPRQIPEQRWYMNRFVGILMAGILPFGAMFIELFFIFSAIWENQFYYLFGFLFLV 540
VRTNQIPRQIPEQRWYMNRFVGILMAGILPFGAMFIELFFIFSAIWENQFYYLFGFLFLV
Sbjct: 481 VRTNQIPRQIPEQRWYMNRFVGILMAGILPFGAMFIELFFIFSAIWENQFYYLFGFLFLV 540
Query: 541 FIILVVSCSQISIVMVYFQLCAEDYRWWWRNFLVSGGSAFYVLVYAIFYFVNKLDIVEFI 600
FIILVVSCSQISIVMVYFQLCAEDYRWWWRNFLVSGGSAFYVLVYAIFYFVNKLDIVEFI
Sbjct: 541 FIILVVSCSQISIVMVYFQLCAEDYRWWWRNFLVSGGSAFYVLVYAIFYFVNKLDIVEFI 600
Query: 601 PSLLYFGYTALMVLSFWLLTGTIGFYAAYMFVRKIYAAVKID 642
PSLLYFGYTALMVLSFWLLTGTIGFYAAYMFVRKIYAAVKID
Sbjct: 601 PSLLYFGYTALMVLSFWLLTGTIGFYAAYMFVRKIYAAVKID 642
>gi|4758874 transmembrane 9 superfamily member 2 [Homo sapiens]
Length = 663
Score = 548 bits (1413), Expect = e-156
Identities = 290/663 (43%), Positives = 414/663 (62%), Gaps = 47/663 (7%)
Query: 12 LLLFSLMC--------ETSAFYVPGVAPINFHQNDP--------VEIKAVKLTSSRTQLP 55
LLL SL+ + AFY+PG+AP+NF + +E+ +L S + LP
Sbjct: 16 LLLLSLLLLGAVPGPRRSGAFYLPGLAPVNFCDEEKKSDECKAEIELFVNRLDSVESVLP 75
Query: 56 YEYYSLPFCQPSKITYKAENLGEVLRGDRIVNTPFQVLMNSEKKCEVLCSQSNKPVTLTV 115
YEY + FCQ S+ +ENLG+VL G+RI +P++ N ++ C+++C+++
Sbjct: 76 YEYTAFDFCQASEGKRPSENLGQVLFGERIEPSPYKFTFNKKETCKLVCTKTYHTEKAED 135
Query: 116 EQS-RLVAERITEDYYVHLIADNLPVATRLELYSNRDS-----------DDKKKEKDVQF 163
+Q + + + +Y H I DN+PV ++ + DK KD
Sbjct: 136 KQKLEFLKKSMLLNYQHHWIVDNMPVTWCYDVEDGQRFCNPGFPIGCYITDKGHAKDACV 195
Query: 164 EHGYRLGFTDVNKIYLHNHLSFILYYHREDMEEDQEHTYRVVRFEVIPQSIRLEDLKADE 223
F + + Y+ NH+ +YYH + E R+V ++ P+S + + +
Sbjct: 196 ISS---DFHERDTFYIFNHVDIKIYYH---VVETGSMGARLVAAKLEPKSFKHTHI---D 246
Query: 224 KSSCTLPEGTNSSPQEID--PTKENQLYFTYSVHWEESD-IKWASRWDTYL-TMSDVQIH 279
K C+ P P +I + E ++ +TYSV +EE D I+WASRWD L +M I
Sbjct: 247 KPDCSGP------PMDISNKASGEIKIAYTYSVSFEEDDKIRWASRWDYILESMPHTHIQ 300
Query: 280 WFSIINSVVVVFFLSGILSMIIIRTLRKDIANYNKEDDIEDTMEESGWKLVHGDVFRPPQ 339
WFSI+NS+V+V FLSG+++MI++RTL KDIA YN+ D ED EE GWKLVHGD+FRPP+
Sbjct: 301 WFSIMNSLVIVLFLSGMVAMIMLRTLHKDIARYNQMDSTEDAQEEFGWKLVHGDIFRPPR 360
Query: 340 YPMILSSLLGSGIQLFCMILIVIFVAMLGMLSPSSRGALMTTACFLFMFMGVFGGFSAGR 399
M+LS LGSG Q+ M + +F A LG LSP++RGALMT A L++ +G G+ A R
Sbjct: 361 KGMLLSVFLGSGTQILIMTFVTLFFACLGFLSPANRGALMTCAVVLWVLLGTPAGYVAAR 420
Query: 400 LYRTLKGHRWKKGAFCTATLYPGVVFGICFVLNCFIWGKHSSGAVPFPTMVALLCMWFGI 459
Y++ G +WK T+ L PG+VF F++N +WG+ SS A+PF T+VA+L +WF I
Sbjct: 421 FYKSFGGEKWKTNVLLTSFLCPGIVFADFFIMNLILWGEGSSAAIPFGTLVAILALWFCI 480
Query: 460 SLPLVYLGYYFGFRKQPYDNPVRTNQIPRQIPEQRWYMNRFVGILMAGILPFGAMFIELF 519
S+PL ++G YFGF+K ++PVRTNQIPRQIPEQ +Y GI+M GILPFG +FI+LF
Sbjct: 481 SVPLTFIGAYFGFKKNAIEHPVRTNQIPRQIPEQSFYTKPLPGIIMGGILPFGCIFIQLF 540
Query: 520 FIFSAIWENQFYYLFGFLFLVFIILVVSCSQISIVMVYFQLCAEDYRWWWRNFLVSGGSA 579
FI ++IW +Q YY+FGFLFLVFIILV++CS+ +I++ YF LCAEDY W WR+FL SG +A
Sbjct: 541 FILNSIWSHQMYYMFGFLFLVFIILVITCSEATILLCYFHLCAEDYHWQWRSFLTSGFTA 600
Query: 580 FYVLVYAIFYFVNKLDIVEFIPSLLYFGYTALMVLSFWLLTGTIGFYAAYMFVRKIYAAV 639
Y L+YA+ YF +KL I ++LYFGYT +MVL F+L TGTIGF+A + FV KIY+ V
Sbjct: 601 VYFLIYAVHYFFSKLQITGTASTILYFGYTMIMVLIFFLFTGTIGFFACFWFVTKIYSVV 660
Query: 640 KID 642
K+D
Sbjct: 661 KVD 663
>gi|190194386 transmembrane 9 superfamily member 3 [Homo sapiens]
Length = 589
Score = 346 bits (887), Expect = 4e-95
Identities = 178/415 (42%), Positives = 257/415 (61%), Gaps = 8/415 (1%)
Query: 235 SSPQEIDPTKENQLYFTYSVHWEESDIKWASRWDTYLTMSDVQ--IHWFSIINSVVVVFF 292
+S ++ ++ +YSV W++SD+K+ R+D YL S Q IHWFSI NS ++V F
Sbjct: 176 TSEGKVKLVPNTKIQMSYSVKWKKSDVKFEDRFDKYLDPSFFQHRIHWFSIFNSFMMVIF 235
Query: 293 LSGILSMIIIRTLRKDIANYNKEDDIEDTM----EESGWKLVHGDVFRPPQYPMILSSLL 348
L G++SMI++RTLRKD A Y+KE++++D +E GWK VHGDVFRP +P+I SSL+
Sbjct: 236 LVGLVSMILMRTLRKDYARYSKEEEMDDMDRDLGDEYGWKQVHGDVFRPSSHPLIFSSLI 295
Query: 349 GSGIQLFCMILIVIFVAMLGMLSPSSRGALMTTACFLFMFMGVFGGFSAGRLYRTLKGHR 408
GSG Q+F + LIVI VAM+ L + RG++++TA F++ G+ G LY G R
Sbjct: 296 GSGCQIFAVSLIVIIVAMIEDLY-TERGSMLSTAIFVYAATSPVNGYFGGSLYARQGGRR 354
Query: 409 WKKGAFCTATLYPGVVFGICFVLNCFIWGKHSSGAVPFPTMVALLCMWFGISLPLVYLGY 468
W K F A L P +V G F +N H+S A+PF TMVA+ C+ F + LPL +G
Sbjct: 355 WIKQMFIGAFLIPAMVCGTAFFINFIAIYYHASRAIPFGTMVAVCCICFFVILPLNLVGT 414
Query: 469 YFGFRKQPYDN-PVRTNQIPRQIPEQRWYMNRFVGILMAGILPFGAMFIELFFIFSAIWE 527
G N P R N +PR IPE++W+M V + + GILPFG++FIE++FIF++ W
Sbjct: 415 ILGRNLSGQPNFPCRVNAVPRPIPEKKWFMEPAVIVCLGGILPFGSIFIEMYFIFTSFWA 474
Query: 528 NQFYYLFGFLFLVFIILVVSCSQISIVMVYFQLCAEDYRWWWRNFLVSGGSAFYVLVYAI 587
+ YY++GF+ LV +IL + ++IV YF L AEDYRW W +FL + +A YV +Y+
Sbjct: 475 YKIYYVYGFMMLVLVILCIVTVCVTIVCTYFLLNAEDYRWQWTSFLSAASTAIYVYMYSF 534
Query: 588 FYFVNKLDIVEFIPSLLYFGYTALMVLSFWLLTGTIGFYAAYMFVRKIYAAVKID 642
+Y+ K + + YFGY A+ + ++ G IG+ FVRKIY VKID
Sbjct: 535 YYYFFKTKMYGLFQTSFYFGYMAVFSTALGIMCGAIGYMGTSAFVRKIYTNVKID 589
>gi|21361315 transmembrane 9 superfamily member 1 isoform a [Homo
sapiens]
Length = 606
Score = 334 bits (857), Expect = 1e-91
Identities = 201/653 (30%), Positives = 325/653 (49%), Gaps = 77/653 (11%)
Query: 7 WLPWSLLLFSLMCETSAFYVPGVAPINFHQ-NDPVEIKAVKLTSSRT-QLPYEYYSLPFC 64
WLP +LL + PGV + ++ DPV + K+ Q Y YY LP C
Sbjct: 14 WLPILILLLG------TGHGPGVEGVTHYKAGDPVILYVNKVGPYHNPQETYHYYQLPVC 67
Query: 65 QPSKITYKAENLGEVLRGDRIVNTPFQVLMNSEKKCEVLCSQSNKPVTLTVEQSRLVAER 124
P KI +K+ +LGEVL GDR+ + +++ + +LC L+ Q + +
Sbjct: 68 CPEKIRHKSLSLGEVLDGDRMAESLYEIRFRENVEKRILCHMQ-----LSSAQVEQLRQA 122
Query: 125 ITEDYYVHLIADNLPVATRLELYSNRDSDDKKKEKDVQFEHGYRLGFTDVNKIYLHNHLS 184
I E YY + D+LP+ + E+ H +++G L HL
Sbjct: 123 IEELYYFEFVVDDLPIRGFVGYM----------EESGFLPHSHKIG--------LWTHLD 164
Query: 185 FILYYHREDMEEDQEHTYRVVRFEVIPQSIRLEDLKADEKSSCTLPEGTNSSPQEIDPTK 244
F L +H + +I ++ + D+K P +D +
Sbjct: 165 FHLEFHGD---------------RIIFANVSVRDVK----------------PHSLDGLR 193
Query: 245 ENQ---LYFTYSVHWEESDIKWASRW----DTYLTMSDVQIHWFSIINSVVVVFFLSGIL 297
++ L TYSV W E+ ++ S D ++IHW SIINS+V+VF L G +
Sbjct: 194 PDEFLGLTHTYSVRWSETSVERRSDRRRGDDGGFFPRTLEIHWLSIINSMVLVFLLVGFV 253
Query: 298 SMIIIRTLRKDIANYNKEDDIEDT-------MEESGWKLVHGDVFRPPQYPMILSSLLGS 350
++I++R LR D+A YN +++ ++GWK++H DVFR P Y +L ++LG
Sbjct: 254 AVILMRVLRNDLARYNLDEETTSAGSGDDFDQGDNGWKIIHTDVFRFPPYRGLLCAVLGV 313
Query: 351 GIQLFCMILIVIFVAMLGMLSPSSRGALMTTACFLFMFMGVFGGFSAGRLYRTLKGHRWK 410
G Q + +I +A+LGM + GA+ + A L+ G+ + YR + G RW
Sbjct: 314 GAQFLALGTGIIVMALLGMFNVHRHGAINSAAILLYALTCCISGYVSSHFYRQIGGERWV 373
Query: 411 KGAFCTATLYPGVVFGICFVLNCFIWGKHSSGAVPFPTMVALLCMWFGISLPLVYLGYYF 470
T +L+ F V+N W S+ A+P T++ LL +W + PL +G F
Sbjct: 374 WNIILTTSLFSVPFFLTWSVVNSVHWANGSTQALPATTILLLLTVWLLVGFPLTVIGGIF 433
Query: 471 GFRK-QPYDNPVRTNQIPRQIPEQRWYMNRFVGILMAGILPFGAMFIELFFIFSAIWENQ 529
G P+D P RT I R+IP Q WY + + + + G LPF A+ +EL++IF+ +W +
Sbjct: 434 GKNNASPFDAPCRTKNIAREIPPQPWYKSTVIHMTVGGFLPFSAISVELYYIFATVWGRE 493
Query: 530 FYYLFGFLFLVFIILVVSCSQISIVMVYFQLCAEDYRWWWRNFLVSGGSAFYVLVYAIFY 589
Y L+G LF VF IL+ + ISI + YFQL EDYRWWWR+ L G + ++ +Y++FY
Sbjct: 494 QYTLYGILFFVFAILLSVGACISIALTYFQLSGEDYRWWWRSVLSVGSTGLFIFLYSVFY 553
Query: 590 FVNKLDIVEFIPSLLYFGYTALMVLSFWLLTGTIGFYAAYMFVRKIYAAVKID 642
+ + ++ + ++ +FGY+ L F+L+ GTI F+++ F+R IY +K+D
Sbjct: 554 YARRSNMSGAVQTVEFFGYSLLTGYVFFLMLGTISFFSSLKFIRYIYVNLKMD 606
>gi|62460635 transmembrane 9 superfamily member 1 isoform b [Homo
sapiens]
Length = 489
Score = 218 bits (554), Expect = 2e-56
Identities = 150/522 (28%), Positives = 239/522 (45%), Gaps = 77/522 (14%)
Query: 7 WLPWSLLLFSLMCETSAFYVPGVAPINFHQ-NDPVEIKAVKLTSSRT-QLPYEYYSLPFC 64
WLP +LL + PGV + ++ DPV + K+ Q Y YY LP C
Sbjct: 14 WLPILILLLG------TGHGPGVEGVTHYKAGDPVILYVNKVGPYHNPQETYHYYQLPVC 67
Query: 65 QPSKITYKAENLGEVLRGDRIVNTPFQVLMNSEKKCEVLCSQSNKPVTLTVEQSRLVAER 124
P KI +K+ +LGEVL GDR+ + +++ + +LC L+ Q + +
Sbjct: 68 CPEKIRHKSLSLGEVLDGDRMAESLYEIRFRENVEKRILCHMQ-----LSSAQVEQLRQA 122
Query: 125 ITEDYYVHLIADNLPVATRLELYSNRDSDDKKKEKDVQFEHGYRLGFTDVNKIYLHNHLS 184
I E YY + D+LP+ + E+ H +++G L HL
Sbjct: 123 IEELYYFEFVVDDLPIRGFVGYM----------EESGFLPHSHKIG--------LWTHLD 164
Query: 185 FILYYHREDMEEDQEHTYRVVRFEVIPQSIRLEDLKADEKSSCTLPEGTNSSPQEIDPTK 244
F L +H + +I ++ + D+K P +D +
Sbjct: 165 FHLEFHGD---------------RIIFANVSVRDVK----------------PHSLDGLR 193
Query: 245 ENQ---LYFTYSVHWEESDIKWASRW----DTYLTMSDVQIHWFSIINSVVVVFFLSGIL 297
++ L TYSV W E+ ++ S D ++IHW SIINS+V+VF L G +
Sbjct: 194 PDEFLGLTHTYSVRWSETSVERRSDRRRGDDGGFFPRTLEIHWLSIINSMVLVFLLVGFV 253
Query: 298 SMIIIRTLRKDIANYNKEDDIEDT-------MEESGWKLVHGDVFRPPQYPMILSSLLGS 350
++I++R LR D+A YN +++ ++GWK++H DVFR P Y +L ++LG
Sbjct: 254 AVILMRVLRNDLARYNLDEETTSAGSGDDFDQGDNGWKIIHTDVFRFPPYRGLLCAVLGV 313
Query: 351 GIQLFCMILIVIFVAMLGMLSPSSRGALMTTACFLFMFMGVFGGFSAGRLYRTLKGHRWK 410
G Q + +I +A+LGM + GA+ + A L+ G+ + YR + G RW
Sbjct: 314 GAQFLALGTGIIVMALLGMFNVHRHGAINSAAILLYALTCCISGYVSSHFYRQIGGERWV 373
Query: 411 KGAFCTATLYPGVVFGICFVLNCFIWGKHSSGAVPFPTMVALLCMWFGISLPLVYLGYYF 470
T +L+ F V+N W S+ A+P T++ LL +W + PL +G F
Sbjct: 374 WNIILTTSLFSVPFFLTWSVVNSVHWANGSTQALPATTILLLLTVWLLVGFPLTVIGGIF 433
Query: 471 GFRK-QPYDNPVRTNQIPRQIPEQRWYMNRFVGILMAGILPF 511
G P+D P RT I R+IP Q WY + + + + G LPF
Sbjct: 434 GKNNASPFDAPCRTKNIAREIPPQPWYKSTVIHMTVGGFLPF 475
>gi|62632750 ATPase, class VI, type 11B [Homo sapiens]
Length = 1177
Score = 36.2 bits (82), Expect = 0.096
Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 15/89 (16%)
Query: 508 ILPFGAMFIELFFIF-------SAIWENQFYYLFGFLFLVFIILVVSCSQISIVMVYFQL 560
IL F FI F + S + Q + + F LVF ++V++ V ++
Sbjct: 966 ILGFSHAFIFFFGSYLLIGKDTSLLGNGQMFGNWTFGTLVFTVMVIT--------VTVKM 1017
Query: 561 CAEDYRWWWRNFLVSGGSAFYVLVYAIFY 589
E + W W N LV+ GS + V+++FY
Sbjct: 1018 ALETHFWTWINHLVTWGSIIFYFVFSLFY 1046
>gi|170784865 CAS1 domain containing 1 [Homo sapiens]
Length = 797
Score = 34.3 bits (77), Expect = 0.36
Identities = 26/102 (25%), Positives = 49/102 (48%), Gaps = 7/102 (6%)
Query: 543 ILVVSCSQISIVMVYFQLCAEDYRWWWRNFLVSGGSAF----YVLVYAIFYFVN--KLDI 596
IL+ S ++ ++M YF +C + N + S F Y+LV +FY N + +
Sbjct: 366 ILLQSFCKLGLIMAYFYMCDRANLFMKENKFYTHSSFFIPIIYILVLGVFYNENTKETKV 425
Query: 597 VEFIPSLLYFGYTALMVLSFWLLTGTIGFYAAYMFVRKIYAA 638
+ + + G+ L++L + ++G F YM +R + AA
Sbjct: 426 LNREQTDEWKGWMQLVIL-IYHISGASTFLPVYMHIRVLVAA 466
>gi|150421681 ATPase, class VI, type 11A isoform b [Homo sapiens]
Length = 1191
Score = 31.2 bits (69), Expect = 3.1
Identities = 23/99 (23%), Positives = 42/99 (42%), Gaps = 13/99 (13%)
Query: 494 RWYMNRFVGILMAGILPFGAMFIELFFIFSAIWENQFYYLFG---FLFLVFIILVVSCSQ 550
RW + F+ + G+ F +F+F +FG F LVF ++V +
Sbjct: 961 RWRV--FIYWTLLGLFDALVFFFGAYFVFENTTVTSNGQIFGNWTFGTLVFTVMVFT--- 1015
Query: 551 ISIVMVYFQLCAEDYRWWWRNFLVSGGSAFYVLVYAIFY 589
V +L + + W W N V GS + +V+++ +
Sbjct: 1016 -----VTLKLALDTHYWTWINHFVIWGSLLFYVVFSLLW 1049
>gi|223671915 GDP-fucose transporter 1 isoform a [Homo sapiens]
Length = 364
Score = 31.2 bits (69), Expect = 3.1
Identities = 12/38 (31%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 547 SCSQISIVMVYFQLCAEDYRWWWRNFLVSGGSAFYVLV 584
+C+Q + ++Y++ + + WW N +V GGS+ Y V
Sbjct: 304 ACAQTVLAVLYYEE-TKSFLWWTSNMMVLGGSSAYTWV 340
>gi|223671919 GDP-fucose transporter 1 isoform b [Homo sapiens]
Length = 351
Score = 31.2 bits (69), Expect = 3.1
Identities = 12/38 (31%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 547 SCSQISIVMVYFQLCAEDYRWWWRNFLVSGGSAFYVLV 584
+C+Q + ++Y++ + + WW N +V GGS+ Y V
Sbjct: 291 ACAQTVLAVLYYEE-TKSFLWWTSNMMVLGGSSAYTWV 327
>gi|223671917 GDP-fucose transporter 1 isoform b [Homo sapiens]
Length = 351
Score = 31.2 bits (69), Expect = 3.1
Identities = 12/38 (31%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 547 SCSQISIVMVYFQLCAEDYRWWWRNFLVSGGSAFYVLV 584
+C+Q + ++Y++ + + WW N +V GGS+ Y V
Sbjct: 291 ACAQTVLAVLYYEE-TKSFLWWTSNMMVLGGSSAYTWV 327
>gi|153792144 ATP-binding cassette, sub-family A, member 10 [Homo
sapiens]
Length = 1543
Score = 31.2 bits (69), Expect = 3.1
Identities = 24/109 (22%), Positives = 48/109 (44%), Gaps = 11/109 (10%)
Query: 516 IELFFIFSAIWENQFYYLF-GF-----LFLVFIILVVSCSQISIVMVY-----FQLCAED 564
I L+F+ +Y++F GF L V ++ ++ C+ I + Y F+ ++
Sbjct: 985 IPLYFLILFSIHLIYYFIFLGFQLSWELMFVLVVCIIGCAVSLIFLTYVLSFIFRKWRKN 1044
Query: 565 YRWWWRNFLVSGGSAFYVLVYAIFYFVNKLDIVEFIPSLLYFGYTALMV 613
+W F + ++V + +N + + FIPS GY L++
Sbjct: 1045 NGFWSFGFFIILICVSTIMVSTQYEKLNLILCMIFIPSFTLLGYVMLLI 1093
>gi|150421684 ATPase, class VI, type 11A isoform a [Homo sapiens]
Length = 1134
Score = 31.2 bits (69), Expect = 3.1
Identities = 23/99 (23%), Positives = 42/99 (42%), Gaps = 13/99 (13%)
Query: 494 RWYMNRFVGILMAGILPFGAMFIELFFIFSAIWENQFYYLFG---FLFLVFIILVVSCSQ 550
RW + F+ + G+ F +F+F +FG F LVF ++V +
Sbjct: 961 RWRV--FIYWTLLGLFDALVFFFGAYFVFENTTVTSNGQIFGNWTFGTLVFTVMVFT--- 1015
Query: 551 ISIVMVYFQLCAEDYRWWWRNFLVSGGSAFYVLVYAIFY 589
V +L + + W W N V GS + +V+++ +
Sbjct: 1016 -----VTLKLALDTHYWTWINHFVIWGSLLFYVVFSLLW 1049
>gi|134948605 ankyrin repeat domain 12 isoform 2 [Homo sapiens]
Length = 2039
Score = 30.8 bits (68), Expect = 4.0
Identities = 30/132 (22%), Positives = 59/132 (44%), Gaps = 13/132 (9%)
Query: 126 TEDYYVHLIADNLPVATRLELYSNRDSDDKKKEKDVQFEHGYRLGFTDVNKIYLHNHLSF 185
TED ++++ ++L + + +L N D KEK V E ++ + +KI + SF
Sbjct: 683 TEDLFLNMEHESLTLEKKSKLEKNIKDDKSTKEKHVSKERNFK---EERDKIKKESEKSF 739
Query: 186 ------ILYYHREDMEEDQEHTYRVVRFEVIPQSIRLEDLKAD---EKSSCTLPEGTNSS 236
L RE++ D++ + + I +SI L ++ + EK + E +
Sbjct: 740 REEKIKDLKEERENIPTDKDSEFTSLGMSAIEESIGLHLVEKEIDIEKQEKHIKE-SKEK 798
Query: 237 PQEIDPTKENQL 248
P++ KE +
Sbjct: 799 PEKRSQIKEKDI 810
>gi|134948558 ankyrin repeat domain 12 isoform 1 [Homo sapiens]
Length = 2062
Score = 30.8 bits (68), Expect = 4.0
Identities = 30/132 (22%), Positives = 59/132 (44%), Gaps = 13/132 (9%)
Query: 126 TEDYYVHLIADNLPVATRLELYSNRDSDDKKKEKDVQFEHGYRLGFTDVNKIYLHNHLSF 185
TED ++++ ++L + + +L N D KEK V E ++ + +KI + SF
Sbjct: 706 TEDLFLNMEHESLTLEKKSKLEKNIKDDKSTKEKHVSKERNFK---EERDKIKKESEKSF 762
Query: 186 ------ILYYHREDMEEDQEHTYRVVRFEVIPQSIRLEDLKAD---EKSSCTLPEGTNSS 236
L RE++ D++ + + I +SI L ++ + EK + E +
Sbjct: 763 REEKIKDLKEERENIPTDKDSEFTSLGMSAIEESIGLHLVEKEIDIEKQEKHIKE-SKEK 821
Query: 237 PQEIDPTKENQL 248
P++ KE +
Sbjct: 822 PEKRSQIKEKDI 833
>gi|153791630 bromodomain and WD repeat domain containing 3 [Homo
sapiens]
Length = 1802
Score = 30.8 bits (68), Expect = 4.0
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 232 GTNSSPQEIDPTKENQLYFTYSVHWEESDIKWASRWD 268
GT S Q P + + YSVHW+ ++ + S WD
Sbjct: 1065 GTVESQQPFQPEYPDSSFQCYSVHWDNNEREKMSPWD 1101
>gi|116812593 liver-specific organic anion transporter 3TM12 [Homo
sapiens]
Length = 640
Score = 30.4 bits (67), Expect = 5.3
Identities = 40/177 (22%), Positives = 70/177 (39%), Gaps = 51/177 (28%)
Query: 447 PTMVALLCMWFG-----ISLPLVYLGYYFGFRKQPYDNPVR--TNQIPRQIPEQRWYMNR 499
P ++ + C G ++LP ++GYY + K+ +P T+ +P + Q +NR
Sbjct: 47 PKLIGIGCFLMGTGSILMALPHFFMGYY-RYSKETNIDPSENSTSNLPNCLINQMLSLNR 105
Query: 500 ----------------------FVGILMAGI-----LPFGAMFIELFFIFSAIWENQFYY 532
F+G ++ GI +P G +I+ F+ + Y
Sbjct: 106 TPSEIIERGCVKESGSHMWIYVFMGNMLRGIGETPIVPLGISYID---DFAKEGHSSLYL 162
Query: 533 ----LFGFLFLVFIILVVSCSQISIVMVYF------QLCAEDYRW---WWRNFLVSG 576
+ G LVF ++ S V + + ++ +D RW WW FLVSG
Sbjct: 163 GTVNVMGMTGLVFAFMLGSLFAKMYVDIGYVDLSTIRITPKDSRWVGAWWLGFLVSG 219
>gi|116256344 novel 58.3 KDA protein isoform 2 [Homo sapiens]
Length = 502
Score = 30.0 bits (66), Expect = 6.9
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Query: 207 FEVIPQSIRLEDLKAD-EKSSCTLPEGTNSSPQEIDPTKENQLYFT---YSVHWEESDIK 262
FE +P + +D K E SSC+L T Q+ KEN+LY ++ SDI+
Sbjct: 99 FEAVPTKVFGKDKKPTFEDSSCSLYRFTTIPNQDSQLGKENKLYSPARYADALFKSSDIR 158
Query: 263 WASRWDTYLTMS 274
AS D + +S
Sbjct: 159 SASLEDLWENLS 170
>gi|116256342 novel 58.3 KDA protein isoform 1 [Homo sapiens]
Length = 511
Score = 30.0 bits (66), Expect = 6.9
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Query: 207 FEVIPQSIRLEDLKAD-EKSSCTLPEGTNSSPQEIDPTKENQLYFT---YSVHWEESDIK 262
FE +P + +D K E SSC+L T Q+ KEN+LY ++ SDI+
Sbjct: 108 FEAVPTKVFGKDKKPTFEDSSCSLYRFTTIPNQDSQLGKENKLYSPARYADALFKSSDIR 167
Query: 263 WASRWDTYLTMS 274
AS D + +S
Sbjct: 168 SASLEDLWENLS 179
>gi|197333695 poly(A)-specific ribonuclease (deadenylation nuclease)
isoform 2 [Homo sapiens]
Length = 578
Score = 29.6 bits (65), Expect = 9.0
Identities = 22/122 (18%), Positives = 44/122 (36%), Gaps = 14/122 (11%)
Query: 234 NSSPQEIDPTKENQLYFTYSVHWEESDIKWASRWDTYLTMSDVQIHWFSIINSVV----- 288
N ++ P +++ L+ T+ W+ SD+ + + ++QI W ++ V
Sbjct: 373 NLEGPDLQPKRDHVLHVTFPKEWKTSDL-----YQLFSAFGNIQISWIDDTSAFVSLSQP 427
Query: 289 ----VVFFLSGILSMIIIRTLRKDIANYNKEDDIEDTMEESGWKLVHGDVFRPPQYPMIL 344
+ S I+T + + +E I+ E WK P P L
Sbjct: 428 EQVKIAVNTSKYAESYRIQTYAEYMGRKQEEKQIKRKWTEDSWKEADSKRLNPQCIPYTL 487
Query: 345 SS 346
+
Sbjct: 488 QN 489
>gi|4505611 poly(A)-specific ribonuclease (deadenylation nuclease)
isoform 1 [Homo sapiens]
Length = 639
Score = 29.6 bits (65), Expect = 9.0
Identities = 22/122 (18%), Positives = 44/122 (36%), Gaps = 14/122 (11%)
Query: 234 NSSPQEIDPTKENQLYFTYSVHWEESDIKWASRWDTYLTMSDVQIHWFSIINSVV----- 288
N ++ P +++ L+ T+ W+ SD+ + + ++QI W ++ V
Sbjct: 434 NLEGPDLQPKRDHVLHVTFPKEWKTSDL-----YQLFSAFGNIQISWIDDTSAFVSLSQP 488
Query: 289 ----VVFFLSGILSMIIIRTLRKDIANYNKEDDIEDTMEESGWKLVHGDVFRPPQYPMIL 344
+ S I+T + + +E I+ E WK P P L
Sbjct: 489 EQVKIAVNTSKYAESYRIQTYAEYMGRKQEEKQIKRKWTEDSWKEADSKRLNPQCIPYTL 548
Query: 345 SS 346
+
Sbjct: 549 QN 550
>gi|4505069 MAX dimerization protein 1 [Homo sapiens]
Length = 221
Score = 29.6 bits (65), Expect = 9.0
Identities = 16/70 (22%), Positives = 32/70 (45%), Gaps = 6/70 (8%)
Query: 192 EDMEEDQEHTYRVVRFEVIPQSIRLEDLKADEKSSCTLPEGTNSSPQEIDPTKENQLYFT 251
+ ++ +Q H R + + + +E ++ D S E ++S +EID E+ Y T
Sbjct: 120 DQLQREQRHLKRQL------EKLGIERIRMDSIGSTVSSERSDSDREEIDVDVESTDYLT 173
Query: 252 YSVHWEESDI 261
+ W S +
Sbjct: 174 GDLDWSSSSV 183
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.328 0.142 0.451
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,591,318
Number of Sequences: 37866
Number of extensions: 1044627
Number of successful extensions: 3320
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 3288
Number of HSP's gapped (non-prelim): 26
length of query: 642
length of database: 18,247,518
effective HSP length: 109
effective length of query: 533
effective length of database: 14,120,124
effective search space: 7526026092
effective search space used: 7526026092
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.