DEPDC7 1729

Name: DEPDC7	Sequence: fasta or formatted (502aa)		NCBI GI: 116256344
Description: novel 58.3 KDA protein isoform 2		Referenced in: Additional Interaction Domain Families
Other entries for this name: alt prot [511aa] novel 58.3 KDA protein isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.4 27 2 C cysteine 1.4 7 1 D aspartate 7.4 37 1 E glutamate 6.4 32 2 F phenylalanine 4.8 24 1 G glycine 3.8 19 1 H histidine 2.0 10 1 I isoleucine 5.4 27 2 K lysine 8.6 43 3 L leucine 11.8 59 3 M methionine 1.6 8 1 N asparagine 4.8 24 2 P proline 4.2 21 1 Q glutamine 5.2 26 2 R arginine 5.2 26 2 S serine 7.6 38 2 T threonine 3.8 19 2 V valine 6.6 33 2 W tryptophan 1.0 5 1 Y tyrosine 3.4 17 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 novel 58.3 KDA protein isoform 2 DEPDC7 0.965 novel 58.3 KDA protein isoform 1 DEPDC4 0.122 DEP domain containing 4 DEPDC1 0.104 DEP domain containing 1 isoform b DEPDC1B 0.092 DEP domain containing 1B isoform 1 DEPDC1B 0.060 DEP domain containing 1B isoform 2 DEPDC1 0.048 DEP domain containing 1 isoform a CCDC91 0.014 GGA binding partner KIF21A 0.011 kinesin family member 21A PIKFYVE 0.010 phosphatidylinositol-3-phosphate 5-kinase type III ... PIKFYVE 0.010 phosphatidylinositol-3-phosphate 5-kinase type III i... DEPDC6 0.008 DEP domain containing 6 RBM5 0.008 RNA binding motif protein 5 NUP93 0.008 nucleoporin 93kDa RARA 0.006 retinoic acid receptor, alpha isoform 4 RARA 0.006 retinoic acid receptor, alpha isoform 1 RARA 0.006 retinoic acid receptor, alpha isoform 2 RARA 0.006 retinoic acid receptor, alpha isoform 1 TIAM1 0.006 T-cell lymphoma invasion and metastasis 1 PKHD1L1 0.006 fibrocystin L RB1 0.005 retinoblastoma 1 TM9SF4 0.005 transmembrane 9 superfamily protein member 4 BRD8 0.005 bromodomain containing 8 isoform 3 BRD8 0.005 bromodomain containing 8 isoform 1 SMC6 0.005 SMC6 protein SMC6 0.005 SMC6 protein DLC1 0.004 deleted in liver cancer 1 isoform 1 DLC1 0.004 deleted in liver cancer 1 isoform 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.